Protein–RNA interactions for Protein: Q99250

SCN2A, Sodium channel protein type 2 subunit alpha, humanhuman

Predictions only

Length 2,005 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2AQ99250 AC245047.4-201ENST00000433189 144 ntBASIC1.17□□□□□ -2.22
SCN2AQ99250 HSPE1P24-201ENST00000450782 238 ntBASIC1.17□□□□□ -2.22
SCN2AQ99250 AC009474.2-201ENST00000451383 136 ntBASIC1.17□□□□□ -2.22
SCN2AQ99250 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC1.17□□□□□ -2.22
SCN2AQ99250 AC091021.1-201ENST00000468051 388 ntBASIC1.17□□□□□ -2.22
SCN2AQ99250 AC067942.3-201ENST00000512025 362 ntBASIC1.17□□□□□ -2.22
SCN2AQ99250 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.17□□□□□ -2.22
SCN2AQ99250 AC087588.2-201ENST00000617667 426 ntBASIC1.17□□□□□ -2.22
SCN2AQ99250 MIR8054-201ENST00000620877 86 ntBASIC1.17□□□□□ -2.22
SCN2AQ99250 RNU6-376P-201ENST00000384731 106 ntBASIC1.16□□□□□ -2.22
SCN2AQ99250 RNU11-5P-201ENST00000391216 129 ntBASIC1.16□□□□□ -2.22
SCN2AQ99250 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.16□□□□□ -2.22
SCN2AQ99250 AC112492.4-201ENST00000456549 352 ntBASIC1.16□□□□□ -2.22
SCN2AQ99250 SNORD65B-201ENST00000459126 73 ntBASIC1.16□□□□□ -2.22
SCN2AQ99250 AC010469.2-201ENST00000496412 480 ntBASIC1.16□□□□□ -2.22
SCN2AQ99250 AC079140.2-201ENST00000506193 142 ntBASIC1.16□□□□□ -2.22
SCN2AQ99250 AC097473.1-201ENST00000508142 408 ntBASIC1.16□□□□□ -2.22
SCN2AQ99250 SNORA40.9-201ENST00000515895 93 ntBASIC1.16□□□□□ -2.22
SCN2AQ99250 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.16□□□□□ -2.22
SCN2AQ99250 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.16□□□□□ -2.22
SCN2AQ99250 AL365434.2-201ENST00000607979 234 ntBASIC1.16□□□□□ -2.22
SCN2AQ99250 AC009229.3-201ENST00000608056 282 ntBASIC1.16□□□□□ -2.22
SCN2AQ99250 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.16□□□□□ -2.22
SCN2AQ99250 MIR6779-201ENST00000617283 64 ntBASIC1.16□□□□□ -2.22
SCN2AQ99250 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.16□□□□□ -2.22
SCN2AQ99250 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.16□□□□□ -2.22
SCN2AQ99250 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.16□□□□□ -2.22
SCN2AQ99250 RNU6-306P-201ENST00000384617 107 ntBASIC1.16□□□□□ -2.22
SCN2AQ99250 MIR891A-201ENST00000401237 79 ntBASIC1.16□□□□□ -2.22
SCN2AQ99250 RNU2-54P-201ENST00000410299 190 ntBASIC1.16□□□□□ -2.22
SCN2AQ99250 RNU6-1304P-201ENST00000411374 106 ntBASIC1.16□□□□□ -2.22
SCN2AQ99250 ELOCP21-201ENST00000412558 336 ntBASIC1.16□□□□□ -2.22
SCN2AQ99250 COX6CP10-201ENST00000416832 224 ntBASIC1.16□□□□□ -2.22
SCN2AQ99250 MTND4P28-201ENST00000426217 387 ntBASIC1.16□□□□□ -2.22
SCN2AQ99250 AL606517.2-201ENST00000442855 241 ntBASIC1.16□□□□□ -2.22
SCN2AQ99250 AC068338.1-201ENST00000565567 176 ntBASIC1.16□□□□□ -2.22
SCN2AQ99250 AC073413.2-201ENST00000604332 360 ntBASIC1.16□□□□□ -2.22
SCN2AQ99250 SNORD58B-201ENST00000607313 66 ntBASIC1.16□□□□□ -2.22
SCN2AQ99250 AC010999.1-201ENST00000611856 324 ntBASIC1.16□□□□□ -2.22
SCN2AQ99250 AC008873.1-201ENST00000625051 138 ntBASIC1.16□□□□□ -2.22
SCN2AQ99250 AC100821.1-201ENST00000523153 2479 ntBASIC1.15□□□□□ -2.22
SCN2AQ99250 SNORD114-26-201ENST00000363543 72 ntBASIC1.15□□□□□ -2.22
SCN2AQ99250 Y_RNA.187-201ENST00000363918 113 ntBASIC1.15□□□□□ -2.22
SCN2AQ99250 RNU6-454P-201ENST00000364292 107 ntBASIC1.15□□□□□ -2.22
SCN2AQ99250 Y_RNA.361-201ENST00000365515 120 ntBASIC1.15□□□□□ -2.22
SCN2AQ99250 Y_RNA.364-201ENST00000365532 101 ntBASIC1.15□□□□□ -2.22
SCN2AQ99250 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC1.15□□□□□ -2.22
SCN2AQ99250 RNU1-142P-201ENST00000516682 145 ntBASIC1.15□□□□□ -2.22
SCN2AQ99250 SNORA20.3-201ENST00000516880 132 ntBASIC1.15□□□□□ -2.22
SCN2AQ99250 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.15□□□□□ -2.22
SCN2AQ99250 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.15□□□□□ -2.22
SCN2AQ99250 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC1.15□□□□□ -2.22
SCN2AQ99250 UBE2V2P2-201ENST00000587677 504 ntBASIC1.15□□□□□ -2.22
SCN2AQ99250 AC016925.2-201ENST00000605108 242 ntBASIC1.15□□□□□ -2.22
SCN2AQ99250 AL359075.3-201ENST00000613288 217 ntBASIC1.15□□□□□ -2.22
SCN2AQ99250 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.15□□□□□ -2.22
SCN2AQ99250 MIR6734-201ENST00000621166 68 ntBASIC1.15□□□□□ -2.22
SCN2AQ99250 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.15□□□□□ -2.23
SCN2AQ99250 Y_RNA.314-201ENST00000365114 102 ntBASIC1.15□□□□□ -2.23
SCN2AQ99250 RNU6-318P-201ENST00000384283 103 ntBASIC1.15□□□□□ -2.23
SCN2AQ99250 Y_RNA.482-201ENST00000384377 111 ntBASIC1.15□□□□□ -2.23
SCN2AQ99250 Y_RNA.529-201ENST00000384586 119 ntBASIC1.15□□□□□ -2.23
SCN2AQ99250 AL117342.1-201ENST00000404861 406 ntBASIC1.15□□□□□ -2.23
SCN2AQ99250 SNORD12B-201ENST00000410433 91 ntBASIC1.15□□□□□ -2.23
SCN2AQ99250 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.15□□□□□ -2.23
SCN2AQ99250 ELOCP24-201ENST00000456370 334 ntBASIC1.15□□□□□ -2.23
SCN2AQ99250 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC1.15□□□□□ -2.23
SCN2AQ99250 RNU6-1213P-201ENST00000517075 94 ntBASIC1.15□□□□□ -2.23
SCN2AQ99250 AC144568.1-201ENST00000520139 137 ntBASIC1.15□□□□□ -2.23
SCN2AQ99250 AC103810.9-201ENST00000606688 112 ntBASIC1.15□□□□□ -2.23
SCN2AQ99250 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.15□□□□□ -2.23
SCN2AQ99250 AC099654.5-201ENST00000636479 350 ntBASIC1.15□□□□□ -2.23
SCN2AQ99250 AC010615.1-201ENST00000594254 1764 ntBASIC1.14□□□□□ -2.23
SCN2AQ99250 MIR562-201ENST00000384894 95 ntBASIC1.14□□□□□ -2.23
SCN2AQ99250 MIR329-1-201ENST00000385028 80 ntBASIC1.14□□□□□ -2.23
SCN2AQ99250 MT-TD-201ENST00000387419 68 ntBASIC1.14□□□□□ -2.23
SCN2AQ99250 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC1.14□□□□□ -2.23
SCN2AQ99250 AC018865.2-201ENST00000423631 129 ntBASIC1.14□□□□□ -2.23
SCN2AQ99250 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.14□□□□□ -2.23
SCN2AQ99250 RNU6-625P-201ENST00000459412 107 ntBASIC1.14□□□□□ -2.23
SCN2AQ99250 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.14□□□□□ -2.23
SCN2AQ99250 Y_RNA.691-201ENST00000516611 103 ntBASIC1.14□□□□□ -2.23
SCN2AQ99250 RNU6-1223P-201ENST00000517124 104 ntBASIC1.14□□□□□ -2.23
SCN2AQ99250 AC018448.1-201ENST00000552843 316 ntBASIC1.14□□□□□ -2.23
SCN2AQ99250 FRG2DP-202ENST00000566967 323 ntBASIC1.14□□□□□ -2.23
SCN2AQ99250 AL162424.1-201ENST00000602325 221 ntBASIC1.14□□□□□ -2.23
SCN2AQ99250 AL357075.2-201ENST00000614906 189 ntBASIC1.14□□□□□ -2.23
SCN2AQ99250 AC095038.3-201ENST00000634439 195 ntBASIC1.14□□□□□ -2.23
SCN2AQ99250 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
SCN2AQ99250 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.14□□□□□ -2.23
SCN2AQ99250 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
SCN2AQ99250 RNU6-222P-201ENST00000362438 107 ntBASIC1.13□□□□□ -2.23
SCN2AQ99250 RNU6-1301P-201ENST00000362724 104 ntBASIC1.13□□□□□ -2.23
SCN2AQ99250 SNORD1A-201ENST00000364968 72 ntBASIC1.13□□□□□ -2.23
SCN2AQ99250 RNU6-407P-201ENST00000365280 104 ntBASIC1.13□□□□□ -2.23
SCN2AQ99250 RNU6-1283P-201ENST00000365314 105 ntBASIC1.13□□□□□ -2.23
SCN2AQ99250 Y_RNA.405-201ENST00000383979 100 ntBASIC1.13□□□□□ -2.23
SCN2AQ99250 RNU6-42P-201ENST00000384165 107 ntBASIC1.13□□□□□ -2.23
SCN2AQ99250 Y_RNA.451-201ENST00000384200 100 ntBASIC1.13□□□□□ -2.23
SCN2AQ99250 Y_RNA.524-201ENST00000384564 100 ntBASIC1.13□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 151.8 ms