Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC-1.09□□□□□ -2.58
SPENQ96T58 AL157687.1-201ENST00000554853 619 ntBASIC-1.09□□□□□ -2.58
SPENQ96T58 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC-1.09□□□□□ -2.58
SPENQ96T58 MIR4753-201ENST00000585119 83 ntBASIC-1.09□□□□□ -2.58
SPENQ96T58 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC-1.09□□□□□ -2.58
SPENQ96T58 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC-1.09□□□□□ -2.58
SPENQ96T58 RNU6-727P-201ENST00000363592 107 ntBASIC-1.09□□□□□ -2.58
SPENQ96T58 MIR518F-201ENST00000384973 87 ntBASIC-1.09□□□□□ -2.58
SPENQ96T58 MTND1P21-201ENST00000412991 285 ntBASIC-1.09□□□□□ -2.58
SPENQ96T58 AL445193.1-201ENST00000441183 141 ntBASIC-1.09□□□□□ -2.58
SPENQ96T58 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC-1.09□□□□□ -2.58
SPENQ96T58 RNU6-1191P-201ENST00000516799 107 ntBASIC-1.09□□□□□ -2.58
SPENQ96T58 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC-1.09□□□□□ -2.58
SPENQ96T58 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC-1.09□□□□□ -2.58
SPENQ96T58 AC010205.1-201ENST00000616668 449 ntBASIC-1.09□□□□□ -2.58
SPENQ96T58 MT-TN-201ENST00000387400 73 ntBASIC-1.1□□□□□ -2.58
SPENQ96T58 RNU6-721P-201ENST00000410155 105 ntBASIC-1.1□□□□□ -2.58
SPENQ96T58 AL512326.2-201ENST00000426359 151 ntBASIC-1.1□□□□□ -2.58
SPENQ96T58 AC107401.1-201ENST00000503426 685 ntBASIC-1.1□□□□□ -2.58
SPENQ96T58 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC-1.1□□□□□ -2.58
SPENQ96T58 VTRNA2-1-201ENST00000602301 127 ntBASIC-1.1□□□□□ -2.58
SPENQ96T58 AC027279.3-201ENST00000625055 122 ntBASIC-1.1□□□□□ -2.58
SPENQ96T58 SNORD115-28-201ENST00000363931 81 ntBASIC-1.1□□□□□ -2.59
SPENQ96T58 RNU6-417P-201ENST00000384712 107 ntBASIC-1.1□□□□□ -2.59
SPENQ96T58 AC007969.2-201ENST00000441891 191 ntBASIC-1.1□□□□□ -2.59
SPENQ96T58 BTBD7P2-201ENST00000441962 620 ntBASIC-1.1□□□□□ -2.59
SPENQ96T58 RNU6-469P-201ENST00000516253 101 ntBASIC-1.1□□□□□ -2.59
SPENQ96T58 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC-1.1□□□□□ -2.59
SPENQ96T58 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC-1.1□□□□□ -2.59
SPENQ96T58 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC-1.1□□□□□ -2.59
SPENQ96T58 MESTIT1_1.1-201ENST00000618871 140 ntBASIC-1.1□□□□□ -2.59
SPENQ96T58 AP000484.1-201ENST00000620067 1252 ntBASIC-1.1□□□□□ -2.59
SPENQ96T58 MIR9-2-201ENST00000384838 87 ntBASIC-1.1□□□□□ -2.59
SPENQ96T58 MCFD2P1-201ENST00000417812 300 ntBASIC-1.1□□□□□ -2.59
SPENQ96T58 SNORD18.2-201ENST00000459604 70 ntBASIC-1.1□□□□□ -2.59
SPENQ96T58 RNU7-12P-201ENST00000516030 62 ntBASIC-1.1□□□□□ -2.59
SPENQ96T58 AC022217.4-201ENST00000604389 163 ntBASIC-1.1□□□□□ -2.59
SPENQ96T58 AC087683.2-201ENST00000611384 326 ntBASIC-1.1□□□□□ -2.59
SPENQ96T58 RNU6-1167P-201ENST00000363227 94 ntBASIC-1.11□□□□□ -2.59
SPENQ96T58 RNU6-1026P-201ENST00000384465 108 ntBASIC-1.11□□□□□ -2.59
SPENQ96T58 HIGD1AP15-201ENST00000416198 280 ntBASIC-1.11□□□□□ -2.59
SPENQ96T58 AL929288.2-201ENST00000446368 407 ntBASIC-1.11□□□□□ -2.59
SPENQ96T58 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC-1.11□□□□□ -2.59
SPENQ96T58 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC-1.11□□□□□ -2.59
SPENQ96T58 PCMTD1P2-201ENST00000565017 355 ntBASIC-1.11□□□□□ -2.59
SPENQ96T58 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC-1.11□□□□□ -2.59
SPENQ96T58 MIR507-201ENST00000385234 94 ntBASIC-1.11□□□□□ -2.59
SPENQ96T58 RNA5SP86-201ENST00000390869 98 ntBASIC-1.11□□□□□ -2.59
SPENQ96T58 MIR4778-201ENST00000577635 80 ntBASIC-1.11□□□□□ -2.59
SPENQ96T58 Y_RNA.456-201ENST00000384232 111 ntBASIC-1.11□□□□□ -2.59
SPENQ96T58 RNU6-455P-201ENST00000384681 107 ntBASIC-1.11□□□□□ -2.59
SPENQ96T58 SNORA12.2-201ENST00000391040 156 ntBASIC-1.11□□□□□ -2.59
SPENQ96T58 BX276092.1-201ENST00000427368 251 ntBASIC-1.11□□□□□ -2.59
SPENQ96T58 NDUFA5P7-201ENST00000452914 242 ntBASIC-1.11□□□□□ -2.59
SPENQ96T58 RNU7-14P-201ENST00000459331 62 ntBASIC-1.11□□□□□ -2.59
SPENQ96T58 MTND3P5-201ENST00000512798 333 ntBASIC-1.11□□□□□ -2.59
SPENQ96T58 AL117336.2-201ENST00000602435 335 ntBASIC-1.11□□□□□ -2.59
SPENQ96T58 RNY3P11-201ENST00000364153 102 ntBASIC-1.12□□□□□ -2.59
SPENQ96T58 AL442663.2-201ENST00000554385 511 ntBASIC-1.12□□□□□ -2.59
SPENQ96T58 AL356094.1-201ENST00000624663 1212 ntBASIC-1.12□□□□□ -2.59
SPENQ96T58 RNU6-1125P-201ENST00000363601 107 ntBASIC-1.12□□□□□ -2.59
SPENQ96T58 U8.16-201ENST00000391279 133 ntBASIC-1.12□□□□□ -2.59
SPENQ96T58 RNU6-143P-201ENST00000516942 93 ntBASIC-1.12□□□□□ -2.59
SPENQ96T58 MIR4676-201ENST00000583078 72 ntBASIC-1.12□□□□□ -2.59
SPENQ96T58 SNORD39.3-201ENST00000584451 71 ntBASIC-1.12□□□□□ -2.59
SPENQ96T58 MIR588-201ENST00000384900 83 ntBASIC-1.12□□□□□ -2.59
SPENQ96T58 AC010655.3-201ENST00000478818 450 ntBASIC-1.12□□□□□ -2.59
SPENQ96T58 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC-1.12□□□□□ -2.59
SPENQ96T58 RNU5B-2P-201ENST00000363036 113 ntBASIC-1.13□□□□□ -2.59
SPENQ96T58 RNU6-343P-201ENST00000364709 104 ntBASIC-1.13□□□□□ -2.59
SPENQ96T58 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC-1.13□□□□□ -2.59
SPENQ96T58 RNU6-63P-201ENST00000516690 95 ntBASIC-1.13□□□□□ -2.59
SPENQ96T58 AC079610.2-201ENST00000604818 690 ntBASIC-1.13□□□□□ -2.59
SPENQ96T58 RNU5E-10P-201ENST00000363506 118 ntBASIC-1.13□□□□□ -2.59
SPENQ96T58 SNORA22B-201ENST00000383876 138 ntBASIC-1.13□□□□□ -2.59
SPENQ96T58 RNU6-142P-201ENST00000384019 107 ntBASIC-1.13□□□□□ -2.59
SPENQ96T58 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC-1.13□□□□□ -2.59
SPENQ96T58 AC005345.1-201ENST00000431868 217 ntBASIC-1.13□□□□□ -2.59
SPENQ96T58 MTND3P4-201ENST00000453537 303 ntBASIC-1.13□□□□□ -2.59
SPENQ96T58 AP001372.4-201ENST00000524889 472 ntBASIC-1.13□□□□□ -2.59
SPENQ96T58 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC-1.13□□□□□ -2.59
SPENQ96T58 AC078795.2-201ENST00000602835 1252 ntBASIC-1.13□□□□□ -2.59
SPENQ96T58 MIR6818-201ENST00000621576 65 ntBASIC-1.13□□□□□ -2.59
SPENQ96T58 AC073869.9-201ENST00000641610 120 ntBASIC-1.13□□□□□ -2.59
SPENQ96T58 SNORD56B-201ENST00000384713 71 ntBASIC-1.13□□□□□ -2.59
SPENQ96T58 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC-1.13□□□□□ -2.59
SPENQ96T58 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC-1.13□□□□□ -2.59
SPENQ96T58 MIR4639-201ENST00000584938 69 ntBASIC-1.13□□□□□ -2.59
SPENQ96T58 AC012433.1-201ENST00000588916 398 ntBASIC-1.13□□□□□ -2.59
SPENQ96T58 Y_RNA.336-201ENST00000365307 109 ntBASIC-1.14□□□□□ -2.59
SPENQ96T58 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC-1.14□□□□□ -2.59
SPENQ96T58 RNU7-134P-201ENST00000458997 64 ntBASIC-1.14□□□□□ -2.59
SPENQ96T58 AC079395.1-201ENST00000510981 262 ntBASIC-1.14□□□□□ -2.59
SPENQ96T58 AC046134.1-201ENST00000514454 666 ntBASIC-1.14□□□□□ -2.59
SPENQ96T58 VN1R88P-201ENST00000596787 292 ntBASIC-1.14□□□□□ -2.59
SPENQ96T58 TMSB4XP6-201ENST00000415187 135 ntBASIC-1.14□□□□□ -2.59
SPENQ96T58 RNU6-953P-201ENST00000459154 107 ntBASIC-1.14□□□□□ -2.59
SPENQ96T58 AC016632.1-201ENST00000503994 196 ntBASIC-1.14□□□□□ -2.59
SPENQ96T58 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC-1.14□□□□□ -2.59
SPENQ96T58 AC009902.1-201ENST00000519351 183 ntBASIC-1.14□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms