Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 RNU6-323P-201ENST00000521915 107 ntBASIC-0.73□□□□□ -2.53
IFT140Q96RY7 MIR3666-201ENST00000607845 111 ntBASIC-0.73□□□□□ -2.53
IFT140Q96RY7 AC006157.1-201ENST00000611750 366 ntBASIC-0.73□□□□□ -2.53
IFT140Q96RY7 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC-0.73□□□□□ -2.53
IFT140Q96RY7 RNU6-652P-201ENST00000365488 107 ntBASIC-0.73□□□□□ -2.53
IFT140Q96RY7 RNU6-187P-201ENST00000384139 106 ntBASIC-0.73□□□□□ -2.53
IFT140Q96RY7 MIR196A2-201ENST00000385189 110 ntBASIC-0.73□□□□□ -2.53
IFT140Q96RY7 RNA5SP300-201ENST00000391197 107 ntBASIC-0.73□□□□□ -2.53
IFT140Q96RY7 AC091951.3-201ENST00000504093 246 ntBASIC-0.73□□□□□ -2.53
IFT140Q96RY7 AC091133.4-201ENST00000511142 308 ntBASIC-0.73□□□□□ -2.53
IFT140Q96RY7 RNU7-172P-201ENST00000517125 64 ntBASIC-0.73□□□□□ -2.53
IFT140Q96RY7 AC091178.2-201ENST00000584401 117 ntBASIC-0.73□□□□□ -2.53
IFT140Q96RY7 AC138649.3-201ENST00000622154 254 ntBASIC-0.73□□□□□ -2.53
IFT140Q96RY7 MTND5P32-201ENST00000560711 1802 ntBASIC-0.74□□□□□ -2.53
IFT140Q96RY7 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC-0.74□□□□□ -2.53
IFT140Q96RY7 RNU4-63P-201ENST00000411313 118 ntBASIC-0.74□□□□□ -2.53
IFT140Q96RY7 SNX3P1X-201ENST00000414887 175 ntBASIC-0.74□□□□□ -2.53
IFT140Q96RY7 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC-0.74□□□□□ -2.53
IFT140Q96RY7 MTND1P26-201ENST00000440488 538 ntBASIC-0.74□□□□□ -2.53
IFT140Q96RY7 BTBD7P2-201ENST00000441962 620 ntBASIC-0.74□□□□□ -2.53
IFT140Q96RY7 SUMO1P2-201ENST00000452524 304 ntBASIC-0.74□□□□□ -2.53
IFT140Q96RY7 RNU7-182P-201ENST00000459009 62 ntBASIC-0.74□□□□□ -2.53
IFT140Q96RY7 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC-0.74□□□□□ -2.53
IFT140Q96RY7 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC-0.74□□□□□ -2.53
IFT140Q96RY7 RNU6-1291P-201ENST00000516591 104 ntBASIC-0.74□□□□□ -2.53
IFT140Q96RY7 RNU6-1178P-201ENST00000516674 107 ntBASIC-0.74□□□□□ -2.53
IFT140Q96RY7 AC246785.4-201ENST00000605374 287 ntBASIC-0.74□□□□□ -2.53
IFT140Q96RY7 RNU6-433P-201ENST00000363216 104 ntBASIC-0.75□□□□□ -2.53
IFT140Q96RY7 RNU6-179P-201ENST00000363350 107 ntBASIC-0.75□□□□□ -2.53
IFT140Q96RY7 MIR558-201ENST00000384920 94 ntBASIC-0.75□□□□□ -2.53
IFT140Q96RY7 MIR15B-201ENST00000385045 98 ntBASIC-0.75□□□□□ -2.53
IFT140Q96RY7 MLLT10P1-201ENST00000418346 262 ntBASIC-0.75□□□□□ -2.53
IFT140Q96RY7 RPL22P17-201ENST00000438729 315 ntBASIC-0.75□□□□□ -2.53
IFT140Q96RY7 SNORD65B-201ENST00000459126 73 ntBASIC-0.75□□□□□ -2.53
IFT140Q96RY7 RPL39P34-201ENST00000477141 156 ntBASIC-0.75□□□□□ -2.53
IFT140Q96RY7 MTATP6P15-201ENST00000527233 835 ntBASIC-0.75□□□□□ -2.53
IFT140Q96RY7 AC100830.2-201ENST00000581636 240 ntBASIC-0.75□□□□□ -2.53
IFT140Q96RY7 AC008608.1-201ENST00000603910 127 ntBASIC-0.75□□□□□ -2.53
IFT140Q96RY7 RN7SL660P-201ENST00000614852 299 ntBASIC-0.75□□□□□ -2.53
IFT140Q96RY7 Y_RNA.35-201ENST00000362601 101 ntBASIC-0.76□□□□□ -2.53
IFT140Q96RY7 Y_RNA.576-201ENST00000384781 102 ntBASIC-0.76□□□□□ -2.53
IFT140Q96RY7 FGFR1OP2P1-201ENST00000395943 500 ntBASIC-0.76□□□□□ -2.53
IFT140Q96RY7 MTCYBP36-201ENST00000404146 440 ntBASIC-0.76□□□□□ -2.53
IFT140Q96RY7 MTCO3P19-201ENST00000415864 321 ntBASIC-0.76□□□□□ -2.53
IFT140Q96RY7 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC-0.76□□□□□ -2.53
IFT140Q96RY7 AC097462.1-201ENST00000514125 324 ntBASIC-0.76□□□□□ -2.53
IFT140Q96RY7 RNU2-12P-201ENST00000517216 168 ntBASIC-0.76□□□□□ -2.53
IFT140Q96RY7 AL355375.2-201ENST00000574825 175 ntBASIC-0.76□□□□□ -2.53
IFT140Q96RY7 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC-0.76□□□□□ -2.53
IFT140Q96RY7 SNORD11B-201ENST00000607707 90 ntBASIC-0.76□□□□□ -2.53
IFT140Q96RY7 FTX_2.1-201ENST00000618816 94 ntBASIC-0.76□□□□□ -2.53
IFT140Q96RY7 SNORA72.1-201ENST00000363485 129 ntBASIC-0.77□□□□□ -2.53
IFT140Q96RY7 RNU6-364P-201ENST00000384387 107 ntBASIC-0.77□□□□□ -2.53
IFT140Q96RY7 SNORA26-201ENST00000391286 122 ntBASIC-0.77□□□□□ -2.53
IFT140Q96RY7 RNU6-447P-201ENST00000410293 104 ntBASIC-0.77□□□□□ -2.53
IFT140Q96RY7 RNU6-1118P-201ENST00000410382 104 ntBASIC-0.77□□□□□ -2.53
IFT140Q96RY7 RNU6-1076P-201ENST00000410397 104 ntBASIC-0.77□□□□□ -2.53
IFT140Q96RY7 RNU6-355P-201ENST00000410427 104 ntBASIC-0.77□□□□□ -2.53
IFT140Q96RY7 RNU6-791P-201ENST00000410467 104 ntBASIC-0.77□□□□□ -2.53
IFT140Q96RY7 RNU6-705P-201ENST00000410601 104 ntBASIC-0.77□□□□□ -2.53
IFT140Q96RY7 RNU6-1100P-201ENST00000410691 104 ntBASIC-0.77□□□□□ -2.53
IFT140Q96RY7 RNU6-860P-201ENST00000410860 104 ntBASIC-0.77□□□□□ -2.53
IFT140Q96RY7 RNU6-1217P-201ENST00000411276 104 ntBASIC-0.77□□□□□ -2.53
IFT140Q96RY7 RNU6-785P-201ENST00000411324 104 ntBASIC-0.77□□□□□ -2.53
IFT140Q96RY7 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC-0.77□□□□□ -2.53
IFT140Q96RY7 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC-0.77□□□□□ -2.53
IFT140Q96RY7 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC-0.77□□□□□ -2.53
IFT140Q96RY7 AC119618.1-201ENST00000434191 222 ntBASIC-0.77□□□□□ -2.53
IFT140Q96RY7 SNORD123-201ENST00000459473 70 ntBASIC-0.77□□□□□ -2.53
IFT140Q96RY7 AC116353.3-201ENST00000511215 249 ntBASIC-0.77□□□□□ -2.53
IFT140Q96RY7 IGKV1-22-201ENST00000524313 326 ntBASIC-0.77□□□□□ -2.53
IFT140Q96RY7 AC068587.5-201ENST00000528506 175 ntBASIC-0.77□□□□□ -2.53
IFT140Q96RY7 RNY1P9-201ENST00000532431 109 ntBASIC-0.77□□□□□ -2.53
IFT140Q96RY7 AC087685.1-201ENST00000587507 141 ntBASIC-0.77□□□□□ -2.53
IFT140Q96RY7 MIR7107-201ENST00000611489 80 ntBASIC-0.77□□□□□ -2.53
IFT140Q96RY7 U6.90-201ENST00000614007 104 ntBASIC-0.77□□□□□ -2.53
IFT140Q96RY7 U6.70-201ENST00000620287 104 ntBASIC-0.77□□□□□ -2.53
IFT140Q96RY7 AC006435.5-201ENST00000624486 112 ntBASIC-0.77□□□□□ -2.53
IFT140Q96RY7 MIR377-201ENST00000362145 69 ntBASIC-0.78□□□□□ -2.53
IFT140Q96RY7 RNU5B-2P-201ENST00000363036 113 ntBASIC-0.78□□□□□ -2.53
IFT140Q96RY7 RNU6-715P-201ENST00000365204 103 ntBASIC-0.78□□□□□ -2.53
IFT140Q96RY7 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.78□□□□□ -2.53
IFT140Q96RY7 RNU6-413P-201ENST00000384115 107 ntBASIC-0.78□□□□□ -2.53
IFT140Q96RY7 Y_RNA.453-201ENST00000384223 109 ntBASIC-0.78□□□□□ -2.53
IFT140Q96RY7 MIR635-201ENST00000384830 98 ntBASIC-0.78□□□□□ -2.53
IFT140Q96RY7 MIR1468-201ENST00000410600 86 ntBASIC-0.78□□□□□ -2.53
IFT140Q96RY7 AC138869.1-201ENST00000568623 124 ntBASIC-0.78□□□□□ -2.53
IFT140Q96RY7 AC091304.9-201ENST00000612091 226 ntBASIC-0.78□□□□□ -2.53
IFT140Q96RY7 AC006386.1-201ENST00000619436 415 ntBASIC-0.78□□□□□ -2.53
IFT140Q96RY7 SCARNA4-201ENST00000629045 128 ntBASIC-0.78□□□□□ -2.53
IFT140Q96RY7 SNORD45.3-201ENST00000363836 72 ntBASIC-0.79□□□□□ -2.54
IFT140Q96RY7 MT-TN-201ENST00000387400 73 ntBASIC-0.79□□□□□ -2.54
IFT140Q96RY7 RNU6-205P-201ENST00000390858 107 ntBASIC-0.79□□□□□ -2.54
IFT140Q96RY7 AC087499.4-201ENST00000448505 178 ntBASIC-0.79□□□□□ -2.54
IFT140Q96RY7 RNU7-102P-201ENST00000458948 62 ntBASIC-0.79□□□□□ -2.54
IFT140Q96RY7 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC-0.79□□□□□ -2.54
IFT140Q96RY7 AC010525.2-201ENST00000590920 195 ntBASIC-0.79□□□□□ -2.54
IFT140Q96RY7 SNORD38B-202ENST00000625943 69 ntBASIC-0.79□□□□□ -2.54
IFT140Q96RY7 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC-0.79□□□□□ -2.54
IFT140Q96RY7 SNORD75.1-201ENST00000408373 60 ntBASIC-0.8□□□□□ -2.54
Retrieved 100 of 98,524 protein–RNA pairs in 128.3 ms