Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 MIR4999-201ENST00000585029 91 ntBASIC-0.37□□□□□ -2.47
AP1S3Q96PC3 RNU5E-5P-201ENST00000365379 116 ntBASIC-0.38□□□□□ -2.47
AP1S3Q96PC3 RNU6-136P-201ENST00000384663 107 ntBASIC-0.38□□□□□ -2.47
AP1S3Q96PC3 MIR562-201ENST00000384894 95 ntBASIC-0.38□□□□□ -2.47
AP1S3Q96PC3 MIR644A-201ENST00000385262 94 ntBASIC-0.38□□□□□ -2.47
AP1S3Q96PC3 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.38□□□□□ -2.47
AP1S3Q96PC3 AL049545.1-201ENST00000401856 572 ntBASIC-0.38□□□□□ -2.47
AP1S3Q96PC3 AC243428.1-201ENST00000421099 264 ntBASIC-0.38□□□□□ -2.47
AP1S3Q96PC3 BTF3P11-201ENST00000426582 477 ntBASIC-0.38□□□□□ -2.47
AP1S3Q96PC3 USP9YP12-201ENST00000450481 570 ntBASIC-0.38□□□□□ -2.47
AP1S3Q96PC3 AC018710.1-201ENST00000506509 158 ntBASIC-0.38□□□□□ -2.47
AP1S3Q96PC3 MIR2115-201ENST00000516657 100 ntBASIC-0.38□□□□□ -2.47
AP1S3Q96PC3 Vault.3-201ENST00000516676 95 ntBASIC-0.38□□□□□ -2.47
AP1S3Q96PC3 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC-0.38□□□□□ -2.47
AP1S3Q96PC3 MIR548AR-201ENST00000582191 57 ntBASIC-0.38□□□□□ -2.47
AP1S3Q96PC3 MTND4P9-201ENST00000507819 1346 ntBASIC-0.38□□□□□ -2.47
AP1S3Q96PC3 SNORD115-8-201ENST00000363856 82 ntBASIC-0.39□□□□□ -2.47
AP1S3Q96PC3 Y_RNA.226-201ENST00000364337 114 ntBASIC-0.39□□□□□ -2.47
AP1S3Q96PC3 SNORD115-38-201ENST00000365037 82 ntBASIC-0.39□□□□□ -2.47
AP1S3Q96PC3 RNU6-187P-201ENST00000384139 106 ntBASIC-0.39□□□□□ -2.47
AP1S3Q96PC3 RNY1P4-201ENST00000384595 115 ntBASIC-0.39□□□□□ -2.47
AP1S3Q96PC3 RNU6-376P-201ENST00000384731 106 ntBASIC-0.39□□□□□ -2.47
AP1S3Q96PC3 RNU6-205P-201ENST00000390858 107 ntBASIC-0.39□□□□□ -2.47
AP1S3Q96PC3 AC018865.2-201ENST00000423631 129 ntBASIC-0.39□□□□□ -2.47
AP1S3Q96PC3 GPR143P-201ENST00000434155 205 ntBASIC-0.39□□□□□ -2.47
AP1S3Q96PC3 MTND1P26-201ENST00000440488 538 ntBASIC-0.39□□□□□ -2.47
AP1S3Q96PC3 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC-0.39□□□□□ -2.47
AP1S3Q96PC3 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC-0.39□□□□□ -2.47
AP1S3Q96PC3 RPL23AP54-201ENST00000495129 419 ntBASIC-0.39□□□□□ -2.47
AP1S3Q96PC3 RNA5SP20-201ENST00000515976 84 ntBASIC-0.39□□□□□ -2.47
AP1S3Q96PC3 PCMTD1P2-201ENST00000565017 355 ntBASIC-0.39□□□□□ -2.47
AP1S3Q96PC3 AC090897.1-201ENST00000580909 226 ntBASIC-0.39□□□□□ -2.47
AP1S3Q96PC3 AP000811.1-201ENST00000603803 651 ntBASIC-0.39□□□□□ -2.47
AP1S3Q96PC3 uc_338.6-201ENST00000613544 171 ntBASIC-0.39□□□□□ -2.47
AP1S3Q96PC3 AL158209.2-201ENST00000619266 216 ntBASIC-0.39□□□□□ -2.47
AP1S3Q96PC3 uc_338.16-201ENST00000621804 95 ntBASIC-0.39□□□□□ -2.47
AP1S3Q96PC3 AL049777.1-201ENST00000622740 518 ntBASIC-0.39□□□□□ -2.47
AP1S3Q96PC3 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC-0.39□□□□□ -2.47
AP1S3Q96PC3 AC013437.2-201ENST00000639587 677 ntBASIC-0.39□□□□□ -2.47
AP1S3Q96PC3 Y_RNA.122-201ENST00000363331 96 ntBASIC-0.4□□□□□ -2.47
AP1S3Q96PC3 RNU6-873P-201ENST00000363833 107 ntBASIC-0.4□□□□□ -2.47
AP1S3Q96PC3 RNA5SP128-201ENST00000365305 116 ntBASIC-0.4□□□□□ -2.47
AP1S3Q96PC3 RNU6-117P-201ENST00000365415 107 ntBASIC-0.4□□□□□ -2.47
AP1S3Q96PC3 Y_RNA.423-201ENST00000384057 113 ntBASIC-0.4□□□□□ -2.47
AP1S3Q96PC3 MIR570-201ENST00000384917 97 ntBASIC-0.4□□□□□ -2.47
AP1S3Q96PC3 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC-0.4□□□□□ -2.47
AP1S3Q96PC3 Z82188.1-201ENST00000436709 154 ntBASIC-0.4□□□□□ -2.47
AP1S3Q96PC3 AC005042.3-201ENST00000453230 174 ntBASIC-0.4□□□□□ -2.47
AP1S3Q96PC3 OFD1P4Y-201ENST00000455273 1179 ntBASIC-0.4□□□□□ -2.47
AP1S3Q96PC3 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC-0.4□□□□□ -2.47
AP1S3Q96PC3 RNU7-138P-201ENST00000459479 64 ntBASIC-0.4□□□□□ -2.47
AP1S3Q96PC3 AC079140.5-201ENST00000507882 310 ntBASIC-0.4□□□□□ -2.47
AP1S3Q96PC3 AL358944.1-201ENST00000528537 144 ntBASIC-0.4□□□□□ -2.47
AP1S3Q96PC3 AC133485.4-201ENST00000561835 220 ntBASIC-0.4□□□□□ -2.47
AP1S3Q96PC3 Z84480.1-201ENST00000605131 311 ntBASIC-0.4□□□□□ -2.47
AP1S3Q96PC3 MIR8087-201ENST00000612745 78 ntBASIC-0.4□□□□□ -2.47
AP1S3Q96PC3 AL591926.4-201ENST00000616895 298 ntBASIC-0.4□□□□□ -2.47
AP1S3Q96PC3 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC-0.4□□□□□ -2.47
AP1S3Q96PC3 Y_RNA.256-201ENST00000364594 104 ntBASIC-0.41□□□□□ -2.48
AP1S3Q96PC3 RNU6-396P-201ENST00000365369 105 ntBASIC-0.41□□□□□ -2.48
AP1S3Q96PC3 SNORA26-201ENST00000391286 122 ntBASIC-0.41□□□□□ -2.48
AP1S3Q96PC3 MTCO2P11-201ENST00000431069 680 ntBASIC-0.41□□□□□ -2.48
AP1S3Q96PC3 AL137792.2-201ENST00000443484 235 ntBASIC-0.41□□□□□ -2.48
AP1S3Q96PC3 RNA5SP54-201ENST00000516951 92 ntBASIC-0.41□□□□□ -2.48
AP1S3Q96PC3 AC104576.1-201ENST00000524225 88 ntBASIC-0.41□□□□□ -2.48
AP1S3Q96PC3 MTND4P33-201ENST00000556706 766 ntBASIC-0.41□□□□□ -2.48
AP1S3Q96PC3 MIR4305-201ENST00000583252 102 ntBASIC-0.41□□□□□ -2.48
AP1S3Q96PC3 AF250324.2-201ENST00000608299 610 ntBASIC-0.41□□□□□ -2.48
AP1S3Q96PC3 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC-0.41□□□□□ -2.48
AP1S3Q96PC3 MIR1295B-201ENST00000636144 60 ntBASIC-0.41□□□□□ -2.48
AP1S3Q96PC3 SNORA27.1-201ENST00000362604 124 ntBASIC-0.42□□□□□ -2.48
AP1S3Q96PC3 RNY1-201ENST00000364228 113 ntBASIC-0.42□□□□□ -2.48
AP1S3Q96PC3 U8.5-201ENST00000364528 136 ntBASIC-0.42□□□□□ -2.48
AP1S3Q96PC3 RNU6-407P-201ENST00000365280 104 ntBASIC-0.42□□□□□ -2.48
AP1S3Q96PC3 Y_RNA.393-201ENST00000383936 102 ntBASIC-0.42□□□□□ -2.48
AP1S3Q96PC3 RNU6-784P-201ENST00000384330 106 ntBASIC-0.42□□□□□ -2.48
AP1S3Q96PC3 RNU2-54P-201ENST00000410299 190 ntBASIC-0.42□□□□□ -2.48
AP1S3Q96PC3 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC-0.42□□□□□ -2.48
AP1S3Q96PC3 RNU6-1232P-201ENST00000516299 86 ntBASIC-0.42□□□□□ -2.48
AP1S3Q96PC3 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC-0.42□□□□□ -2.48
AP1S3Q96PC3 MTND2P38-201ENST00000522536 667 ntBASIC-0.42□□□□□ -2.48
AP1S3Q96PC3 SCOCP1-201ENST00000554676 349 ntBASIC-0.42□□□□□ -2.48
AP1S3Q96PC3 UBL5P4-201ENST00000562584 236 ntBASIC-0.42□□□□□ -2.48
AP1S3Q96PC3 MIR4762-201ENST00000585261 75 ntBASIC-0.42□□□□□ -2.48
AP1S3Q96PC3 Z94722.1-201ENST00000604328 474 ntBASIC-0.42□□□□□ -2.48
AP1S3Q96PC3 RNU4-5P-201ENST00000607255 135 ntBASIC-0.42□□□□□ -2.48
AP1S3Q96PC3 AL157392.4-201ENST00000609756 345 ntBASIC-0.42□□□□□ -2.48
AP1S3Q96PC3 Y_RNA.148-201ENST00000363557 117 ntBASIC-0.43□□□□□ -2.48
AP1S3Q96PC3 U8.7-201ENST00000364940 136 ntBASIC-0.43□□□□□ -2.48
AP1S3Q96PC3 Y_RNA.362-201ENST00000365518 110 ntBASIC-0.43□□□□□ -2.48
AP1S3Q96PC3 Y_RNA.376-201ENST00000365638 108 ntBASIC-0.43□□□□□ -2.48
AP1S3Q96PC3 RNU6-125P-201ENST00000384505 107 ntBASIC-0.43□□□□□ -2.48
AP1S3Q96PC3 RNU6-606P-201ENST00000384721 111 ntBASIC-0.43□□□□□ -2.48
AP1S3Q96PC3 RNU6-1319P-201ENST00000390855 104 ntBASIC-0.43□□□□□ -2.48
AP1S3Q96PC3 RNU6-747P-201ENST00000390928 104 ntBASIC-0.43□□□□□ -2.48
AP1S3Q96PC3 RNU6-241P-201ENST00000391148 104 ntBASIC-0.43□□□□□ -2.48
AP1S3Q96PC3 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC-0.43□□□□□ -2.48
AP1S3Q96PC3 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC-0.43□□□□□ -2.48
AP1S3Q96PC3 MIR1273G-201ENST00000577677 100 ntBASIC-0.43□□□□□ -2.48
AP1S3Q96PC3 AC011712.1-201ENST00000588959 234 ntBASIC-0.43□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms