Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 AC091925.1-201ENST00000623204 462 ntBASIC0.85□□□□□ -2.27
USP47Q96K76 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC0.85□□□□□ -2.27
USP47Q96K76 RNU4-79P-201ENST00000362764 141 ntBASIC0.84□□□□□ -2.27
USP47Q96K76 RNA5SP62-201ENST00000363457 110 ntBASIC0.84□□□□□ -2.27
USP47Q96K76 RNU6-483P-201ENST00000384088 108 ntBASIC0.84□□□□□ -2.27
USP47Q96K76 AL358176.2-201ENST00000425769 204 ntBASIC0.84□□□□□ -2.27
USP47Q96K76 MTND4P18-201ENST00000447010 465 ntBASIC0.84□□□□□ -2.27
USP47Q96K76 RPS27P22-201ENST00000478056 241 ntBASIC0.84□□□□□ -2.27
USP47Q96K76 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC0.84□□□□□ -2.27
USP47Q96K76 AC010469.2-201ENST00000496412 480 ntBASIC0.84□□□□□ -2.27
USP47Q96K76 AC107401.1-201ENST00000503426 685 ntBASIC0.84□□□□□ -2.27
USP47Q96K76 RNU6-496P-201ENST00000516145 99 ntBASIC0.84□□□□□ -2.27
USP47Q96K76 Y_RNA.665-201ENST00000516177 98 ntBASIC0.84□□□□□ -2.27
USP47Q96K76 Y_RNA.688-201ENST00000516565 95 ntBASIC0.84□□□□□ -2.27
USP47Q96K76 Y_RNA.704-201ENST00000516851 102 ntBASIC0.84□□□□□ -2.27
USP47Q96K76 APOOP3-201ENST00000536787 586 ntBASIC0.84□□□□□ -2.27
USP47Q96K76 AL138726.1-201ENST00000614873 333 ntBASIC0.84□□□□□ -2.27
USP47Q96K76 AL391516.1-201ENST00000554380 2449 ntBASIC0.84□□□□□ -2.28
USP47Q96K76 RNU6-199P-201ENST00000362954 107 ntBASIC0.83□□□□□ -2.28
USP47Q96K76 SNORD116-9-201ENST00000384000 95 ntBASIC0.83□□□□□ -2.28
USP47Q96K76 SNORD116-3-201ENST00000384287 95 ntBASIC0.83□□□□□ -2.28
USP47Q96K76 SNORD116-7-201ENST00000384404 95 ntBASIC0.83□□□□□ -2.28
USP47Q96K76 SNORD116-5-201ENST00000384462 95 ntBASIC0.83□□□□□ -2.28
USP47Q96K76 MIR19B1-201ENST00000384829 87 ntBASIC0.83□□□□□ -2.28
USP47Q96K76 MIR653-201ENST00000385279 96 ntBASIC0.83□□□□□ -2.28
USP47Q96K76 RNU6-780P-201ENST00000391030 104 ntBASIC0.83□□□□□ -2.28
USP47Q96K76 AF228730.1-201ENST00000397972 663 ntBASIC0.83□□□□□ -2.28
USP47Q96K76 AC002429.1-201ENST00000437672 148 ntBASIC0.83□□□□□ -2.28
USP47Q96K76 ACA64.5-201ENST00000516207 127 ntBASIC0.83□□□□□ -2.28
USP47Q96K76 RNU6-1281P-201ENST00000516223 105 ntBASIC0.83□□□□□ -2.28
USP47Q96K76 SCARNA16.2-201ENST00000516520 172 ntBASIC0.83□□□□□ -2.28
USP47Q96K76 RNA5SP168-201ENST00000516642 112 ntBASIC0.83□□□□□ -2.28
USP47Q96K76 RNU6-107P-201ENST00000516643 102 ntBASIC0.83□□□□□ -2.28
USP47Q96K76 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC0.83□□□□□ -2.28
USP47Q96K76 AC136932.1-201ENST00000574771 208 ntBASIC0.83□□□□□ -2.28
USP47Q96K76 AL162413.1-201ENST00000603198 110 ntBASIC0.83□□□□□ -2.28
USP47Q96K76 7SK.7-201ENST00000603504 247 ntBASIC0.83□□□□□ -2.28
USP47Q96K76 DLEU2_5.1-201ENST00000615567 84 ntBASIC0.83□□□□□ -2.28
USP47Q96K76 AC245047.7-201ENST00000440265 293 ntBASIC0.83□□□□□ -2.28
USP47Q96K76 DAP3P1-201ENST00000441522 278 ntBASIC0.83□□□□□ -2.28
USP47Q96K76 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC0.83□□□□□ -2.28
USP47Q96K76 MIR4661-201ENST00000582720 75 ntBASIC0.83□□□□□ -2.28
USP47Q96K76 MIR3672-201ENST00000584290 82 ntBASIC0.83□□□□□ -2.28
USP47Q96K76 AC080078.2-201ENST00000603766 501 ntBASIC0.83□□□□□ -2.28
USP47Q96K76 SNORA28-201ENST00000606769 126 ntBASIC0.83□□□□□ -2.28
USP47Q96K76 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC0.83□□□□□ -2.28
USP47Q96K76 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
USP47Q96K76 Y_RNA.124-201ENST00000363339 93 ntBASIC0.82□□□□□ -2.28
USP47Q96K76 Y_RNA.184-201ENST00000363884 108 ntBASIC0.82□□□□□ -2.28
USP47Q96K76 Y_RNA.265-201ENST00000364677 108 ntBASIC0.82□□□□□ -2.28
USP47Q96K76 AC063976.4-201ENST00000421971 163 ntBASIC0.82□□□□□ -2.28
USP47Q96K76 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.82□□□□□ -2.28
USP47Q96K76 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC0.82□□□□□ -2.28
USP47Q96K76 CALM2P4-201ENST00000430810 426 ntBASIC0.82□□□□□ -2.28
USP47Q96K76 MTCO3P18-201ENST00000440206 761 ntBASIC0.82□□□□□ -2.28
USP47Q96K76 SNORD124-201ENST00000459577 104 ntBASIC0.82□□□□□ -2.28
USP47Q96K76 AC091144.1-201ENST00000519573 138 ntBASIC0.82□□□□□ -2.28
USP47Q96K76 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC0.82□□□□□ -2.28
USP47Q96K76 AC090049.2-201ENST00000550377 109 ntBASIC0.82□□□□□ -2.28
USP47Q96K76 AC106800.4-201ENST00000614905 153 ntBASIC0.82□□□□□ -2.28
USP47Q96K76 Y_RNA.363-201ENST00000365529 113 ntBASIC0.81□□□□□ -2.28
USP47Q96K76 RNU6-332P-201ENST00000391193 108 ntBASIC0.81□□□□□ -2.28
USP47Q96K76 AC114482.1-201ENST00000418010 247 ntBASIC0.81□□□□□ -2.28
USP47Q96K76 ZNF885P-201ENST00000420174 1098 ntBASIC0.81□□□□□ -2.28
USP47Q96K76 AC092628.1-201ENST00000436250 252 ntBASIC0.81□□□□□ -2.28
USP47Q96K76 MRPS10P1-201ENST00000448483 130 ntBASIC0.81□□□□□ -2.28
USP47Q96K76 AC093850.1-201ENST00000454121 251 ntBASIC0.81□□□□□ -2.28
USP47Q96K76 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.81□□□□□ -2.28
USP47Q96K76 TRBVA-201ENST00000498804 316 ntBASIC0.81□□□□□ -2.28
USP47Q96K76 AC105313.1-201ENST00000509121 353 ntBASIC0.81□□□□□ -2.28
USP47Q96K76 AC010598.1-201ENST00000510378 103 ntBASIC0.81□□□□□ -2.28
USP47Q96K76 RNU7-175P-201ENST00000515915 61 ntBASIC0.81□□□□□ -2.28
USP47Q96K76 SNORD79.1-201ENST00000516069 84 ntBASIC0.81□□□□□ -2.28
USP47Q96K76 RNU6-256P-201ENST00000516747 97 ntBASIC0.81□□□□□ -2.28
USP47Q96K76 MIR5696-201ENST00000578474 85 ntBASIC0.81□□□□□ -2.28
USP47Q96K76 PIGPP4-201ENST00000584447 307 ntBASIC0.81□□□□□ -2.28
USP47Q96K76 AC124303.1-201ENST00000605703 360 ntBASIC0.81□□□□□ -2.28
USP47Q96K76 MIR6079-201ENST00000635807 62 ntBASIC0.81□□□□□ -2.28
USP47Q96K76 RNU5F-3P-201ENST00000363767 117 ntBASIC0.8□□□□□ -2.28
USP47Q96K76 RNU1-36P-201ENST00000365130 165 ntBASIC0.8□□□□□ -2.28
USP47Q96K76 MIR10B-201ENST00000385011 110 ntBASIC0.8□□□□□ -2.28
USP47Q96K76 SNORD41-201ENST00000386967 70 ntBASIC0.8□□□□□ -2.28
USP47Q96K76 U8.16-201ENST00000391279 133 ntBASIC0.8□□□□□ -2.28
USP47Q96K76 AL451046.2-201ENST00000403074 277 ntBASIC0.8□□□□□ -2.28
USP47Q96K76 RNU6-908P-201ENST00000410160 94 ntBASIC0.8□□□□□ -2.28
USP47Q96K76 RNA5SP127-201ENST00000411051 133 ntBASIC0.8□□□□□ -2.28
USP47Q96K76 AC098934.3-201ENST00000430450 190 ntBASIC0.8□□□□□ -2.28
USP47Q96K76 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.8□□□□□ -2.28
USP47Q96K76 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC0.8□□□□□ -2.28
USP47Q96K76 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC0.8□□□□□ -2.28
USP47Q96K76 AP000870.1-201ENST00000472927 406 ntBASIC0.8□□□□□ -2.28
USP47Q96K76 AC019235.1-201ENST00000503847 207 ntBASIC0.8□□□□□ -2.28
USP47Q96K76 AC093303.1-201ENST00000514549 295 ntBASIC0.8□□□□□ -2.28
USP47Q96K76 RNU6-917P-201ENST00000516294 104 ntBASIC0.8□□□□□ -2.28
USP47Q96K76 MIR4273-201ENST00000582824 84 ntBASIC0.8□□□□□ -2.28
USP47Q96K76 AC092954.2-201ENST00000609103 430 ntBASIC0.8□□□□□ -2.28
USP47Q96K76 AC010999.1-201ENST00000611856 324 ntBASIC0.8□□□□□ -2.28
USP47Q96K76 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.79□□□□□ -2.28
USP47Q96K76 SNORD114-24-201ENST00000365029 72 ntBASIC0.79□□□□□ -2.28
USP47Q96K76 Y_RNA.458-201ENST00000384240 102 ntBASIC0.79□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 187.1 ms