Protein–RNA interactions for Protein: Q92617

NPIPB3, Nuclear pore complex-interacting protein family member B3, humanhuman

Predictions only

Length 1,050 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3Q92617 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.06□□□□□ -2.08
NPIPB3Q92617 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.06□□□□□ -2.08
NPIPB3Q92617 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.06□□□□□ -2.08
NPIPB3Q92617 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
NPIPB3Q92617 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
NPIPB3Q92617 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.05□□□□□ -2.08
NPIPB3Q92617 Y_RNA.54-201ENST00000362766 105 ntBASIC2.05□□□□□ -2.08
NPIPB3Q92617 SNORA25.6-201ENST00000364121 118 ntBASIC2.05□□□□□ -2.08
NPIPB3Q92617 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.05□□□□□ -2.08
NPIPB3Q92617 DEFA7P-201ENST00000382676 285 ntBASIC2.05□□□□□ -2.08
NPIPB3Q92617 SNORD116-13-201ENST00000384408 92 ntBASIC2.05□□□□□ -2.08
NPIPB3Q92617 Y_RNA.489-201ENST00000384410 101 ntBASIC2.05□□□□□ -2.08
NPIPB3Q92617 MIR518C-201ENST00000384822 101 ntBASIC2.05□□□□□ -2.08
NPIPB3Q92617 MIR23B-201ENST00000384832 97 ntBASIC2.05□□□□□ -2.08
NPIPB3Q92617 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
NPIPB3Q92617 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.05□□□□□ -2.08
NPIPB3Q92617 RNU7-94P-201ENST00000459576 63 ntBASIC2.05□□□□□ -2.08
NPIPB3Q92617 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.05□□□□□ -2.08
NPIPB3Q92617 RNVU1-2-201ENST00000516326 135 ntBASIC2.05□□□□□ -2.08
NPIPB3Q92617 RNU6-63P-201ENST00000516690 95 ntBASIC2.05□□□□□ -2.08
NPIPB3Q92617 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.05□□□□□ -2.08
NPIPB3Q92617 BX284668.6-201ENST00000606899 438 ntBASIC2.05□□□□□ -2.08
NPIPB3Q92617 AC004832.4-201ENST00000608952 331 ntBASIC2.05□□□□□ -2.08
NPIPB3Q92617 AL078604.3-201ENST00000615580 211 ntBASIC2.05□□□□□ -2.08
NPIPB3Q92617 U6.108-201ENST00000637764 58 ntBASIC2.05□□□□□ -2.08
NPIPB3Q92617 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.05□□□□□ -2.08
NPIPB3Q92617 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.04□□□□□ -2.08
NPIPB3Q92617 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.04□□□□□ -2.08
NPIPB3Q92617 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
NPIPB3Q92617 RNU6-1272P-201ENST00000362776 107 ntBASIC2.04□□□□□ -2.08
NPIPB3Q92617 RNU4-13P-201ENST00000364019 141 ntBASIC2.04□□□□□ -2.08
NPIPB3Q92617 Y_RNA.217-201ENST00000364214 105 ntBASIC2.04□□□□□ -2.08
NPIPB3Q92617 RNU6-662P-201ENST00000384253 104 ntBASIC2.04□□□□□ -2.08
NPIPB3Q92617 Y_RNA.477-201ENST00000384352 108 ntBASIC2.04□□□□□ -2.08
NPIPB3Q92617 MIR520G-201ENST00000385064 90 ntBASIC2.04□□□□□ -2.08
NPIPB3Q92617 RNA5SP171-201ENST00000391071 115 ntBASIC2.04□□□□□ -2.08
NPIPB3Q92617 AL162725.1-201ENST00000435405 301 ntBASIC2.04□□□□□ -2.08
NPIPB3Q92617 AL135790.2-201ENST00000437701 267 ntBASIC2.04□□□□□ -2.08
NPIPB3Q92617 Y_RNA.641-201ENST00000459414 105 ntBASIC2.04□□□□□ -2.08
NPIPB3Q92617 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.04□□□□□ -2.08
NPIPB3Q92617 AL163195.1-201ENST00000496941 348 ntBASIC2.04□□□□□ -2.08
NPIPB3Q92617 RNU6-1023P-201ENST00000516137 106 ntBASIC2.04□□□□□ -2.08
NPIPB3Q92617 RNU6-1271P-201ENST00000517049 105 ntBASIC2.04□□□□□ -2.08
NPIPB3Q92617 MIR3128-201ENST00000581957 66 ntBASIC2.04□□□□□ -2.08
NPIPB3Q92617 MIR5092-201ENST00000583139 88 ntBASIC2.04□□□□□ -2.08
NPIPB3Q92617 AL162424.1-201ENST00000602325 221 ntBASIC2.04□□□□□ -2.08
NPIPB3Q92617 AL049779.4-201ENST00000604500 156 ntBASIC2.04□□□□□ -2.08
NPIPB3Q92617 AC005972.2-201ENST00000604690 348 ntBASIC2.04□□□□□ -2.08
NPIPB3Q92617 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.04□□□□□ -2.08
NPIPB3Q92617 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
NPIPB3Q92617 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.04□□□□□ -2.08
NPIPB3Q92617 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC2.03□□□□□ -2.08
NPIPB3Q92617 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
NPIPB3Q92617 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
NPIPB3Q92617 Y_RNA.20-201ENST00000362479 113 ntBASIC2.03□□□□□ -2.08
NPIPB3Q92617 Y_RNA.172-201ENST00000363765 102 ntBASIC2.03□□□□□ -2.08
NPIPB3Q92617 RNU6-801P-201ENST00000364087 105 ntBASIC2.03□□□□□ -2.08
NPIPB3Q92617 RNU6-740P-201ENST00000364734 105 ntBASIC2.03□□□□□ -2.08
NPIPB3Q92617 SNORA20.1-201ENST00000364790 130 ntBASIC2.03□□□□□ -2.08
NPIPB3Q92617 SNORA72.4-201ENST00000384174 132 ntBASIC2.03□□□□□ -2.08
NPIPB3Q92617 RNU6-1289P-201ENST00000384431 106 ntBASIC2.03□□□□□ -2.08
NPIPB3Q92617 MIR562-201ENST00000384894 95 ntBASIC2.03□□□□□ -2.08
NPIPB3Q92617 RNA5SP511-201ENST00000410487 115 ntBASIC2.03□□□□□ -2.08
NPIPB3Q92617 AL135786.1-201ENST00000415892 214 ntBASIC2.03□□□□□ -2.08
NPIPB3Q92617 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.03□□□□□ -2.08
NPIPB3Q92617 HSPE1P21-201ENST00000438283 308 ntBASIC2.03□□□□□ -2.08
NPIPB3Q92617 AC107083.1-201ENST00000439643 279 ntBASIC2.03□□□□□ -2.08
NPIPB3Q92617 AL135938.1-201ENST00000443141 297 ntBASIC2.03□□□□□ -2.08
NPIPB3Q92617 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC2.03□□□□□ -2.08
NPIPB3Q92617 RNU7-116P-201ENST00000516940 62 ntBASIC2.03□□□□□ -2.08
NPIPB3Q92617 AC084364.2-201ENST00000546924 395 ntBASIC2.03□□□□□ -2.08
NPIPB3Q92617 AC110588.1-201ENST00000559699 137 ntBASIC2.03□□□□□ -2.08
NPIPB3Q92617 AC015720.1-201ENST00000565251 277 ntBASIC2.03□□□□□ -2.08
NPIPB3Q92617 MIR3944-201ENST00000581277 108 ntBASIC2.03□□□□□ -2.08
NPIPB3Q92617 MIR4325-201ENST00000583049 90 ntBASIC2.03□□□□□ -2.08
NPIPB3Q92617 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.03□□□□□ -2.08
NPIPB3Q92617 AC010297.1-201ENST00000623948 149 ntBASIC2.03□□□□□ -2.08
NPIPB3Q92617 AC068647.2-201ENST00000637380 353 ntBASIC2.03□□□□□ -2.08
NPIPB3Q92617 AC018630.2-201ENST00000534866 2403 ntBASIC2.03□□□□□ -2.08
NPIPB3Q92617 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
NPIPB3Q92617 AC008555.8-201ENST00000623602 2168 ntBASIC2.02□□□□□ -2.09
NPIPB3Q92617 Y_RNA.60-201ENST00000362831 98 ntBASIC2.02□□□□□ -2.09
NPIPB3Q92617 SNORD27-201ENST00000363981 72 ntBASIC2.02□□□□□ -2.09
NPIPB3Q92617 Y_RNA.277-201ENST00000364754 102 ntBASIC2.02□□□□□ -2.09
NPIPB3Q92617 RNU1-138P-201ENST00000384093 164 ntBASIC2.02□□□□□ -2.09
NPIPB3Q92617 SNORA44-201ENST00000384584 132 ntBASIC2.02□□□□□ -2.09
NPIPB3Q92617 MTND1P19-201ENST00000511780 315 ntBASIC2.02□□□□□ -2.09
NPIPB3Q92617 Y_RNA.673-201ENST00000516306 88 ntBASIC2.02□□□□□ -2.09
NPIPB3Q92617 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.02□□□□□ -2.09
NPIPB3Q92617 AC079600.2-201ENST00000550076 130 ntBASIC2.02□□□□□ -2.09
NPIPB3Q92617 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC2.02□□□□□ -2.09
NPIPB3Q92617 AC010900.2-201ENST00000604508 210 ntBASIC2.02□□□□□ -2.09
NPIPB3Q92617 AC093732.2-201ENST00000607950 274 ntBASIC2.02□□□□□ -2.09
NPIPB3Q92617 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.02□□□□□ -2.09
NPIPB3Q92617 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.02□□□□□ -2.09
NPIPB3Q92617 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
NPIPB3Q92617 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
NPIPB3Q92617 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
NPIPB3Q92617 MIR6073-201ENST00000352083 89 ntBASIC2.01□□□□□ -2.09
NPIPB3Q92617 Y_RNA.82-201ENST00000363000 102 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms