Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -1.99
CCHCR1Q8TD31 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -1.99
CCHCR1Q8TD31 Y_RNA.292-201ENST00000364904 97 ntBASIC2.59□□□□□ -1.99
CCHCR1Q8TD31 RNU1-52P-201ENST00000384190 164 ntBASIC2.59□□□□□ -1.99
CCHCR1Q8TD31 Y_RNA.785-201ENST00000384290 109 ntBASIC2.59□□□□□ -1.99
CCHCR1Q8TD31 MIR873-201ENST00000401120 77 ntBASIC2.59□□□□□ -1.99
CCHCR1Q8TD31 MIR1298-201ENST00000408783 112 ntBASIC2.59□□□□□ -1.99
CCHCR1Q8TD31 Y_RNA.590-201ENST00000410140 107 ntBASIC2.59□□□□□ -1.99
CCHCR1Q8TD31 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.59□□□□□ -1.99
CCHCR1Q8TD31 AL121890.1-201ENST00000435457 205 ntBASIC2.59□□□□□ -1.99
CCHCR1Q8TD31 AL135790.2-201ENST00000437701 267 ntBASIC2.59□□□□□ -1.99
CCHCR1Q8TD31 Z98949.2-201ENST00000440996 144 ntBASIC2.59□□□□□ -1.99
CCHCR1Q8TD31 RPL23AP7-203ENST00000449021 469 ntBASIC2.59□□□□□ -1.99
CCHCR1Q8TD31 AL109933.2-201ENST00000452651 260 ntBASIC2.59□□□□□ -1.99
CCHCR1Q8TD31 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.59□□□□□ -1.99
CCHCR1Q8TD31 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC2.59□□□□□ -1.99
CCHCR1Q8TD31 AL078604.3-201ENST00000615580 211 ntBASIC2.59□□□□□ -1.99
CCHCR1Q8TD31 AC006435.5-201ENST00000624486 112 ntBASIC2.59□□□□□ -1.99
CCHCR1Q8TD31 SNORA27.1-201ENST00000362604 124 ntBASIC2.58□□□□□ -2
CCHCR1Q8TD31 RNU6-1272P-201ENST00000362776 107 ntBASIC2.58□□□□□ -2
CCHCR1Q8TD31 Y_RNA.99-201ENST00000363138 105 ntBASIC2.58□□□□□ -2
CCHCR1Q8TD31 Y_RNA.274-201ENST00000364714 101 ntBASIC2.58□□□□□ -2
CCHCR1Q8TD31 RNU6-1240P-201ENST00000365155 104 ntBASIC2.58□□□□□ -2
CCHCR1Q8TD31 Y_RNA.368-201ENST00000365547 113 ntBASIC2.58□□□□□ -2
CCHCR1Q8TD31 Y_RNA.638-201ENST00000459374 113 ntBASIC2.58□□□□□ -2
CCHCR1Q8TD31 SNORD116-28-201ENST00000516123 91 ntBASIC2.58□□□□□ -2
CCHCR1Q8TD31 AC136628.3-201ENST00000521868 290 ntBASIC2.58□□□□□ -2
CCHCR1Q8TD31 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC2.58□□□□□ -2
CCHCR1Q8TD31 AC009127.3-201ENST00000570531 403 ntBASIC2.58□□□□□ -2
CCHCR1Q8TD31 MIR6895-201ENST00000613497 78 ntBASIC2.58□□□□□ -2
CCHCR1Q8TD31 snoU18.1-201ENST00000629629 71 ntBASIC2.58□□□□□ -2
CCHCR1Q8TD31 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.58□□□□□ -2
CCHCR1Q8TD31 AC005336.3-201ENST00000623833 2679 ntBASIC2.57□□□□□ -2
CCHCR1Q8TD31 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.57□□□□□ -2
CCHCR1Q8TD31 AC131280.1-202ENST00000624067 4211 ntBASIC2.57□□□□□ -2
CCHCR1Q8TD31 RNU6-801P-201ENST00000364087 105 ntBASIC2.57□□□□□ -2
CCHCR1Q8TD31 Y_RNA.510-201ENST00000384511 114 ntBASIC2.57□□□□□ -2
CCHCR1Q8TD31 MT-TR-201ENST00000387439 65 ntBASIC2.57□□□□□ -2
CCHCR1Q8TD31 RNU6ATAC19P-201ENST00000408096 110 ntBASIC2.57□□□□□ -2
CCHCR1Q8TD31 HSPE1P13-201ENST00000451143 297 ntBASIC2.57□□□□□ -2
CCHCR1Q8TD31 AC108938.1-201ENST00000451204 136 ntBASIC2.57□□□□□ -2
CCHCR1Q8TD31 Y_RNA.637-201ENST00000459424 114 ntBASIC2.57□□□□□ -2
CCHCR1Q8TD31 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.57□□□□□ -2
CCHCR1Q8TD31 Y_RNA.679-201ENST00000516416 91 ntBASIC2.57□□□□□ -2
CCHCR1Q8TD31 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.57□□□□□ -2
CCHCR1Q8TD31 AC073349.3-201ENST00000617616 186 ntBASIC2.57□□□□□ -2
CCHCR1Q8TD31 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
CCHCR1Q8TD31 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.56□□□□□ -2
CCHCR1Q8TD31 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
CCHCR1Q8TD31 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC2.56□□□□□ -2
CCHCR1Q8TD31 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.56□□□□□ -2
CCHCR1Q8TD31 Y_RNA.124-201ENST00000363339 93 ntBASIC2.56□□□□□ -2
CCHCR1Q8TD31 RNU6-271P-201ENST00000363858 105 ntBASIC2.56□□□□□ -2
CCHCR1Q8TD31 Y_RNA.199-201ENST00000364014 102 ntBASIC2.56□□□□□ -2
CCHCR1Q8TD31 Y_RNA.310-201ENST00000365063 113 ntBASIC2.56□□□□□ -2
CCHCR1Q8TD31 Y_RNA.456-201ENST00000384232 111 ntBASIC2.56□□□□□ -2
CCHCR1Q8TD31 Y_RNA.626-201ENST00000411288 95 ntBASIC2.56□□□□□ -2
CCHCR1Q8TD31 EDDM3CP-201ENST00000415977 425 ntBASIC2.56□□□□□ -2
CCHCR1Q8TD31 SNORA4.4-201ENST00000515921 135 ntBASIC2.56□□□□□ -2
CCHCR1Q8TD31 U2.15-201ENST00000611544 191 ntBASIC2.56□□□□□ -2
CCHCR1Q8TD31 U2.16-201ENST00000613119 191 ntBASIC2.56□□□□□ -2
CCHCR1Q8TD31 U2.12-201ENST00000613778 191 ntBASIC2.56□□□□□ -2
CCHCR1Q8TD31 U2.20-201ENST00000613956 192 ntBASIC2.56□□□□□ -2
CCHCR1Q8TD31 U2.9-201ENST00000615427 191 ntBASIC2.56□□□□□ -2
CCHCR1Q8TD31 U2.11-201ENST00000616345 191 ntBASIC2.56□□□□□ -2
CCHCR1Q8TD31 U2.2-201ENST00000616535 191 ntBASIC2.56□□□□□ -2
CCHCR1Q8TD31 U2.3-201ENST00000617785 191 ntBASIC2.56□□□□□ -2
CCHCR1Q8TD31 U2.19-201ENST00000618602 191 ntBASIC2.56□□□□□ -2
CCHCR1Q8TD31 RNU2-1-201ENST00000618664 191 ntBASIC2.56□□□□□ -2
CCHCR1Q8TD31 U2.6-201ENST00000619225 191 ntBASIC2.56□□□□□ -2
CCHCR1Q8TD31 U2.5-201ENST00000619465 191 ntBASIC2.56□□□□□ -2
CCHCR1Q8TD31 U2.10-201ENST00000620268 191 ntBASIC2.56□□□□□ -2
CCHCR1Q8TD31 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.56□□□□□ -2
CCHCR1Q8TD31 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.56□□□□□ -2
CCHCR1Q8TD31 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
CCHCR1Q8TD31 Y_RNA.83-201ENST00000363005 113 ntBASIC2.55□□□□□ -2
CCHCR1Q8TD31 Y_RNA.111-201ENST00000363248 100 ntBASIC2.55□□□□□ -2
CCHCR1Q8TD31 SNORD114-30-201ENST00000364448 72 ntBASIC2.55□□□□□ -2
CCHCR1Q8TD31 RNU6-211P-201ENST00000384047 107 ntBASIC2.55□□□□□ -2
CCHCR1Q8TD31 MIR27B-201ENST00000385129 97 ntBASIC2.55□□□□□ -2
CCHCR1Q8TD31 MIR1262-201ENST00000408276 93 ntBASIC2.55□□□□□ -2
CCHCR1Q8TD31 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.55□□□□□ -2
CCHCR1Q8TD31 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.55□□□□□ -2
CCHCR1Q8TD31 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC2.55□□□□□ -2
CCHCR1Q8TD31 RNU1-131P-201ENST00000458943 161 ntBASIC2.55□□□□□ -2
CCHCR1Q8TD31 RPS26P55-201ENST00000471178 356 ntBASIC2.55□□□□□ -2
CCHCR1Q8TD31 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.55□□□□□ -2
CCHCR1Q8TD31 CYCSP26-201ENST00000534107 320 ntBASIC2.55□□□□□ -2
CCHCR1Q8TD31 MIR3162-201ENST00000581818 82 ntBASIC2.55□□□□□ -2
CCHCR1Q8TD31 AC006023.1-201ENST00000603944 259 ntBASIC2.55□□□□□ -2
CCHCR1Q8TD31 AL008718.3-201ENST00000610217 321 ntBASIC2.55□□□□□ -2
CCHCR1Q8TD31 AC245884.12-201ENST00000615364 59 ntBASIC2.55□□□□□ -2
CCHCR1Q8TD31 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC2.55□□□□□ -2
CCHCR1Q8TD31 AL136360.1-201ENST00000503377 1900 ntBASIC2.54□□□□□ -2
CCHCR1Q8TD31 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
CCHCR1Q8TD31 MIR411-201ENST00000362239 96 ntBASIC2.54□□□□□ -2
CCHCR1Q8TD31 RNA5SP68-201ENST00000363885 119 ntBASIC2.54□□□□□ -2
CCHCR1Q8TD31 Y_RNA.297-201ENST00000364950 91 ntBASIC2.54□□□□□ -2
CCHCR1Q8TD31 Y_RNA.341-201ENST00000365341 102 ntBASIC2.54□□□□□ -2
CCHCR1Q8TD31 RNU6-763P-201ENST00000390865 106 ntBASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms