Protein–RNA interactions for Protein: Q8NCR9

CLRN3, Clarin-3, humanhuman

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN3Q8NCR9 MTND5P15-201ENST00000434246 349 ntBASIC2.43□□□□□ -2.02
CLRN3Q8NCR9 RPS29P7-201ENST00000439662 171 ntBASIC2.43□□□□□ -2.02
CLRN3Q8NCR9 Z98949.2-201ENST00000440996 144 ntBASIC2.43□□□□□ -2.02
CLRN3Q8NCR9 Y_RNA.644-201ENST00000459006 113 ntBASIC2.43□□□□□ -2.02
CLRN3Q8NCR9 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
CLRN3Q8NCR9 Y_RNA.674-201ENST00000516362 113 ntBASIC2.43□□□□□ -2.02
CLRN3Q8NCR9 SNORA70.18-201ENST00000516696 98 ntBASIC2.43□□□□□ -2.02
CLRN3Q8NCR9 AL358944.1-201ENST00000528537 144 ntBASIC2.43□□□□□ -2.02
CLRN3Q8NCR9 CARD18-203ENST00000532895 422 ntTSL 2 BASIC2.43□□□□□ -2.02
CLRN3Q8NCR9 AC011604.1-201ENST00000545978 196 ntBASIC2.43□□□□□ -2.02
CLRN3Q8NCR9 AC087499.8-201ENST00000578406 226 ntBASIC2.43□□□□□ -2.02
CLRN3Q8NCR9 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC2.43□□□□□ -2.02
CLRN3Q8NCR9 MIR6798-201ENST00000612887 67 ntBASIC2.43□□□□□ -2.02
CLRN3Q8NCR9 AC034229.5-201ENST00000624258 185 ntBASIC2.43□□□□□ -2.02
CLRN3Q8NCR9 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC2.43□□□□□ -2.02
CLRN3Q8NCR9 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
CLRN3Q8NCR9 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.42□□□□□ -2.02
CLRN3Q8NCR9 RNU6-674P-201ENST00000363831 107 ntBASIC2.42□□□□□ -2.02
CLRN3Q8NCR9 RNA5SP450-201ENST00000411206 102 ntBASIC2.42□□□□□ -2.02
CLRN3Q8NCR9 RN7SL20P-201ENST00000488827 297 ntBASIC2.42□□□□□ -2.02
CLRN3Q8NCR9 RN7SKP18-201ENST00000516005 275 ntBASIC2.42□□□□□ -2.02
CLRN3Q8NCR9 SNORA31.11-201ENST00000516528 139 ntBASIC2.42□□□□□ -2.02
CLRN3Q8NCR9 RNU2-19P-201ENST00000517288 84 ntBASIC2.42□□□□□ -2.02
CLRN3Q8NCR9 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.42□□□□□ -2.02
CLRN3Q8NCR9 uc_338.25-201ENST00000613756 156 ntBASIC2.42□□□□□ -2.02
CLRN3Q8NCR9 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
CLRN3Q8NCR9 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
CLRN3Q8NCR9 Z82195.2-201ENST00000612348 18351 ntBASIC2.41□□□□□ -2.02
CLRN3Q8NCR9 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
CLRN3Q8NCR9 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.41□□□□□ -2.02
CLRN3Q8NCR9 RNU6-525P-201ENST00000363685 104 ntBASIC2.41□□□□□ -2.02
CLRN3Q8NCR9 RNA5SP479-201ENST00000364858 117 ntBASIC2.41□□□□□ -2.02
CLRN3Q8NCR9 Y_RNA.308-201ENST00000365043 101 ntBASIC2.41□□□□□ -2.02
CLRN3Q8NCR9 SNORD23.1-201ENST00000408212 104 ntBASIC2.41□□□□□ -2.02
CLRN3Q8NCR9 AC063976.3-201ENST00000426849 329 ntBASIC2.41□□□□□ -2.02
CLRN3Q8NCR9 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC2.41□□□□□ -2.02
CLRN3Q8NCR9 AC026402.1-201ENST00000513642 170 ntBASIC2.41□□□□□ -2.02
CLRN3Q8NCR9 RNA5SP367-201ENST00000516557 118 ntBASIC2.41□□□□□ -2.02
CLRN3Q8NCR9 RNA5SP402-201ENST00000517148 110 ntBASIC2.41□□□□□ -2.02
CLRN3Q8NCR9 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
CLRN3Q8NCR9 AP002004.2-201ENST00000531656 154 ntBASIC2.41□□□□□ -2.02
CLRN3Q8NCR9 CBX3P4-201ENST00000538909 354 ntBASIC2.41□□□□□ -2.02
CLRN3Q8NCR9 AC084364.2-201ENST00000546924 395 ntBASIC2.41□□□□□ -2.02
CLRN3Q8NCR9 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC2.41□□□□□ -2.02
CLRN3Q8NCR9 MIR2681-201ENST00000581814 105 ntBASIC2.41□□□□□ -2.02
CLRN3Q8NCR9 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.41□□□□□ -2.02
CLRN3Q8NCR9 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC2.41□□□□□ -2.02
CLRN3Q8NCR9 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
CLRN3Q8NCR9 MIR554-201ENST00000384874 96 ntBASIC2.4□□□□□ -2.03
CLRN3Q8NCR9 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
CLRN3Q8NCR9 RNA5SP181-201ENST00000410246 98 ntBASIC2.4□□□□□ -2.03
CLRN3Q8NCR9 RNA5SP501-201ENST00000410990 112 ntBASIC2.4□□□□□ -2.03
CLRN3Q8NCR9 RNU2-64P-201ENST00000411315 191 ntBASIC2.4□□□□□ -2.03
CLRN3Q8NCR9 TRBV12-1-201ENST00000479785 344 ntBASIC2.4□□□□□ -2.03
CLRN3Q8NCR9 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC2.4□□□□□ -2.03
CLRN3Q8NCR9 HMGB3P3-201ENST00000510526 400 ntBASIC2.4□□□□□ -2.03
CLRN3Q8NCR9 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.4□□□□□ -2.03
CLRN3Q8NCR9 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.4□□□□□ -2.03
CLRN3Q8NCR9 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
CLRN3Q8NCR9 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.39□□□□□ -2.03
CLRN3Q8NCR9 Y_RNA.267-201ENST00000364679 109 ntBASIC2.39□□□□□ -2.03
CLRN3Q8NCR9 RNU6-923P-201ENST00000364753 107 ntBASIC2.39□□□□□ -2.03
CLRN3Q8NCR9 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
CLRN3Q8NCR9 AL359837.1-201ENST00000381357 287 ntBASIC2.39□□□□□ -2.03
CLRN3Q8NCR9 RNU6-950P-201ENST00000384651 107 ntBASIC2.39□□□□□ -2.03
CLRN3Q8NCR9 MIR626-201ENST00000385032 94 ntBASIC2.39□□□□□ -2.03
CLRN3Q8NCR9 AL512604.1-201ENST00000404812 257 ntBASIC2.39□□□□□ -2.03
CLRN3Q8NCR9 Y_RNA.621-201ENST00000411065 96 ntBASIC2.39□□□□□ -2.03
CLRN3Q8NCR9 AC092017.2-201ENST00000427600 362 ntBASIC2.39□□□□□ -2.03
CLRN3Q8NCR9 AC245047.4-201ENST00000433189 144 ntBASIC2.39□□□□□ -2.03
CLRN3Q8NCR9 AC011753.1-201ENST00000451001 220 ntBASIC2.39□□□□□ -2.03
CLRN3Q8NCR9 AC233266.1-201ENST00000454518 96 ntBASIC2.39□□□□□ -2.03
CLRN3Q8NCR9 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC2.39□□□□□ -2.03
CLRN3Q8NCR9 RN7SKP164-201ENST00000516138 266 ntBASIC2.39□□□□□ -2.03
CLRN3Q8NCR9 RNVU1-2-201ENST00000516326 135 ntBASIC2.39□□□□□ -2.03
CLRN3Q8NCR9 RNU6-1291P-201ENST00000516591 104 ntBASIC2.39□□□□□ -2.03
CLRN3Q8NCR9 AC242852.1-201ENST00000612151 96 ntBASIC2.39□□□□□ -2.03
CLRN3Q8NCR9 AC244015.1-201ENST00000622301 99 ntBASIC2.39□□□□□ -2.03
CLRN3Q8NCR9 MIR203B-201ENST00000636080 86 ntBASIC2.39□□□□□ -2.03
CLRN3Q8NCR9 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.39□□□□□ -2.03
CLRN3Q8NCR9 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.38□□□□□ -2.03
CLRN3Q8NCR9 Y_RNA.203-201ENST00000364106 102 ntBASIC2.38□□□□□ -2.03
CLRN3Q8NCR9 Y_RNA.435-201ENST00000384095 112 ntBASIC2.38□□□□□ -2.03
CLRN3Q8NCR9 MIR520A-201ENST00000384862 85 ntBASIC2.38□□□□□ -2.03
CLRN3Q8NCR9 RNU6-493P-201ENST00000391321 108 ntBASIC2.38□□□□□ -2.03
CLRN3Q8NCR9 RN7SKP111-201ENST00000410349 271 ntBASIC2.38□□□□□ -2.03
CLRN3Q8NCR9 ATP5A1P2-201ENST00000412323 255 ntBASIC2.38□□□□□ -2.03
CLRN3Q8NCR9 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
CLRN3Q8NCR9 AC245047.3-201ENST00000429428 127 ntBASIC2.38□□□□□ -2.03
CLRN3Q8NCR9 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC2.38□□□□□ -2.03
CLRN3Q8NCR9 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
CLRN3Q8NCR9 AC055731.1-201ENST00000474387 401 ntBASIC2.38□□□□□ -2.03
CLRN3Q8NCR9 RNU2-56P-201ENST00000516826 190 ntBASIC2.38□□□□□ -2.03
CLRN3Q8NCR9 AC021269.2-201ENST00000532318 330 ntBASIC2.38□□□□□ -2.03
CLRN3Q8NCR9 AP002392.1-201ENST00000537692 208 ntBASIC2.38□□□□□ -2.03
CLRN3Q8NCR9 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.38□□□□□ -2.03
CLRN3Q8NCR9 AC098479.1-201ENST00000609225 154 ntBASIC2.38□□□□□ -2.03
CLRN3Q8NCR9 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
CLRN3Q8NCR9 AC131280.1-202ENST00000624067 4211 ntBASIC2.38□□□□□ -2.03
CLRN3Q8NCR9 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms