Protein–RNA interactions for Protein: Q8NAE3

LINC01555, Putative uncharacterized protein encoded by LINC01555, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01555Q8NAE3 Y_RNA.638-201ENST00000459374 113 ntBASIC1.3□□□□□ -2.2
LINC01555Q8NAE3 AC004223.1-201ENST00000479840 271 ntBASIC1.3□□□□□ -2.2
LINC01555Q8NAE3 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.3□□□□□ -2.2
LINC01555Q8NAE3 RN7SKP295-201ENST00000517264 153 ntBASIC1.3□□□□□ -2.2
LINC01555Q8NAE3 AC025647.1-201ENST00000517879 253 ntBASIC1.3□□□□□ -2.2
LINC01555Q8NAE3 AC023442.1-201ENST00000531247 422 ntBASIC1.3□□□□□ -2.2
LINC01555Q8NAE3 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.3□□□□□ -2.2
LINC01555Q8NAE3 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.3□□□□□ -2.2
LINC01555Q8NAE3 AC091925.1-201ENST00000623204 462 ntBASIC1.3□□□□□ -2.2
LINC01555Q8NAE3 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.3□□□□□ -2.2
LINC01555Q8NAE3 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.3□□□□□ -2.2
LINC01555Q8NAE3 Y_RNA.39-201ENST00000362620 98 ntBASIC1.29□□□□□ -2.2
LINC01555Q8NAE3 Y_RNA.148-201ENST00000363557 117 ntBASIC1.29□□□□□ -2.2
LINC01555Q8NAE3 U3.8-201ENST00000363675 217 ntBASIC1.29□□□□□ -2.2
LINC01555Q8NAE3 SNORA7.1-201ENST00000363750 139 ntBASIC1.29□□□□□ -2.2
LINC01555Q8NAE3 RNU1-96P-201ENST00000364163 162 ntBASIC1.29□□□□□ -2.2
LINC01555Q8NAE3 RNU6-454P-201ENST00000364292 107 ntBASIC1.29□□□□□ -2.2
LINC01555Q8NAE3 Y_RNA.287-201ENST00000364853 94 ntBASIC1.29□□□□□ -2.2
LINC01555Q8NAE3 Y_RNA.431-201ENST00000384086 102 ntBASIC1.29□□□□□ -2.2
LINC01555Q8NAE3 MIR1253-201ENST00000408273 105 ntBASIC1.29□□□□□ -2.2
LINC01555Q8NAE3 MIR1185-2-201ENST00000408687 86 ntBASIC1.29□□□□□ -2.2
LINC01555Q8NAE3 MCFD2P1-201ENST00000417812 300 ntBASIC1.29□□□□□ -2.2
LINC01555Q8NAE3 AC005002.2-201ENST00000438228 269 ntBASIC1.29□□□□□ -2.2
LINC01555Q8NAE3 MTND4P19-201ENST00000446659 478 ntBASIC1.29□□□□□ -2.2
LINC01555Q8NAE3 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.29□□□□□ -2.2
LINC01555Q8NAE3 AC074290.1-201ENST00000448883 135 ntBASIC1.29□□□□□ -2.2
LINC01555Q8NAE3 AC009474.2-201ENST00000451383 136 ntBASIC1.29□□□□□ -2.2
LINC01555Q8NAE3 RNU1-123P-201ENST00000458950 160 ntBASIC1.29□□□□□ -2.2
LINC01555Q8NAE3 RNU6-221P-201ENST00000459541 99 ntBASIC1.29□□□□□ -2.2
LINC01555Q8NAE3 RNU6-966P-201ENST00000516479 104 ntBASIC1.29□□□□□ -2.2
LINC01555Q8NAE3 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.29□□□□□ -2.2
LINC01555Q8NAE3 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.29□□□□□ -2.2
LINC01555Q8NAE3 AC023157.2-201ENST00000540596 141 ntBASIC1.29□□□□□ -2.2
LINC01555Q8NAE3 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.29□□□□□ -2.2
LINC01555Q8NAE3 AL442163.3-201ENST00000554110 156 ntBASIC1.29□□□□□ -2.2
LINC01555Q8NAE3 MIR4659A-201ENST00000580269 81 ntBASIC1.29□□□□□ -2.2
LINC01555Q8NAE3 VN1R91P-201ENST00000594377 169 ntBASIC1.29□□□□□ -2.2
LINC01555Q8NAE3 AL606534.2-204ENST00000635008 178 ntBASIC1.29□□□□□ -2.2
LINC01555Q8NAE3 MIR338-201ENST00000636369 67 ntBASIC1.29□□□□□ -2.2
LINC01555Q8NAE3 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.29□□□□□ -2.2
LINC01555Q8NAE3 RNU5F-3P-201ENST00000363767 117 ntBASIC1.28□□□□□ -2.2
LINC01555Q8NAE3 RNU6-203P-201ENST00000384038 104 ntBASIC1.28□□□□□ -2.2
LINC01555Q8NAE3 RNU6-439P-201ENST00000384188 106 ntBASIC1.28□□□□□ -2.2
LINC01555Q8NAE3 SNORA48.1-201ENST00000390879 135 ntBASIC1.28□□□□□ -2.2
LINC01555Q8NAE3 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
LINC01555Q8NAE3 AL117342.1-201ENST00000404861 406 ntBASIC1.28□□□□□ -2.2
LINC01555Q8NAE3 AL354751.2-201ENST00000415471 210 ntBASIC1.28□□□□□ -2.2
LINC01555Q8NAE3 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.28□□□□□ -2.2
LINC01555Q8NAE3 HSPE1P21-201ENST00000438283 308 ntBASIC1.28□□□□□ -2.2
LINC01555Q8NAE3 Y_RNA.639-201ENST00000458981 102 ntBASIC1.28□□□□□ -2.2
LINC01555Q8NAE3 AC010409.1-201ENST00000487382 476 ntBASIC1.28□□□□□ -2.2
LINC01555Q8NAE3 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.28□□□□□ -2.2
LINC01555Q8NAE3 AC005786.1-201ENST00000588553 154 ntBASIC1.28□□□□□ -2.2
LINC01555Q8NAE3 snoU13.31-201ENST00000607291 104 ntBASIC1.28□□□□□ -2.2
LINC01555Q8NAE3 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
LINC01555Q8NAE3 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.27□□□□□ -2.21
LINC01555Q8NAE3 snoU2-30.2-201ENST00000362805 70 ntBASIC1.27□□□□□ -2.21
LINC01555Q8NAE3 Y_RNA.112-201ENST00000363250 102 ntBASIC1.27□□□□□ -2.21
LINC01555Q8NAE3 SNORA22B-201ENST00000383876 138 ntBASIC1.27□□□□□ -2.21
LINC01555Q8NAE3 RNU6-1264P-201ENST00000383891 107 ntBASIC1.27□□□□□ -2.21
LINC01555Q8NAE3 Y_RNA.395-201ENST00000383945 109 ntBASIC1.27□□□□□ -2.21
LINC01555Q8NAE3 RNY3P4-201ENST00000384428 101 ntBASIC1.27□□□□□ -2.21
LINC01555Q8NAE3 RNU6-997P-201ENST00000384725 107 ntBASIC1.27□□□□□ -2.21
LINC01555Q8NAE3 SNORD78.2-201ENST00000391076 69 ntBASIC1.27□□□□□ -2.21
LINC01555Q8NAE3 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.27□□□□□ -2.21
LINC01555Q8NAE3 RNU6-1186P-201ENST00000410429 97 ntBASIC1.27□□□□□ -2.21
LINC01555Q8NAE3 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.27□□□□□ -2.21
LINC01555Q8NAE3 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.27□□□□□ -2.21
LINC01555Q8NAE3 SNORD65B-201ENST00000459126 73 ntBASIC1.27□□□□□ -2.21
LINC01555Q8NAE3 Y_RNA.631-201ENST00000459607 101 ntBASIC1.27□□□□□ -2.21
LINC01555Q8NAE3 RPL26P26-201ENST00000480251 434 ntBASIC1.27□□□□□ -2.21
LINC01555Q8NAE3 RNU6-397P-201ENST00000516226 104 ntBASIC1.27□□□□□ -2.21
LINC01555Q8NAE3 RNU2-34P-201ENST00000516534 121 ntBASIC1.27□□□□□ -2.21
LINC01555Q8NAE3 Y_RNA.701-201ENST00000516812 110 ntBASIC1.27□□□□□ -2.21
LINC01555Q8NAE3 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.27□□□□□ -2.21
LINC01555Q8NAE3 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.27□□□□□ -2.21
LINC01555Q8NAE3 AC068338.1-201ENST00000565567 176 ntBASIC1.27□□□□□ -2.21
LINC01555Q8NAE3 AC022254.1-201ENST00000567857 235 ntBASIC1.27□□□□□ -2.21
LINC01555Q8NAE3 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.27□□□□□ -2.21
LINC01555Q8NAE3 MIR3660-201ENST00000584845 100 ntBASIC1.27□□□□□ -2.21
LINC01555Q8NAE3 AC004467.1-201ENST00000615678 330 ntBASIC1.27□□□□□ -2.21
LINC01555Q8NAE3 AC240442.1-201ENST00000616055 283 ntBASIC1.27□□□□□ -2.21
LINC01555Q8NAE3 MIR3674-201ENST00000636576 68 ntBASIC1.27□□□□□ -2.21
LINC01555Q8NAE3 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.27□□□□□ -2.21
LINC01555Q8NAE3 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.27□□□□□ -2.21
LINC01555Q8NAE3 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
LINC01555Q8NAE3 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.26□□□□□ -2.21
LINC01555Q8NAE3 Y_RNA.101-201ENST00000363154 102 ntBASIC1.26□□□□□ -2.21
LINC01555Q8NAE3 Y_RNA.124-201ENST00000363339 93 ntBASIC1.26□□□□□ -2.21
LINC01555Q8NAE3 RNU6-1240P-201ENST00000365155 104 ntBASIC1.26□□□□□ -2.21
LINC01555Q8NAE3 RNU6-20P-201ENST00000384106 107 ntBASIC1.26□□□□□ -2.21
LINC01555Q8NAE3 MIR758-201ENST00000390227 88 ntBASIC1.26□□□□□ -2.21
LINC01555Q8NAE3 Y_RNA.645-201ENST00000391229 102 ntBASIC1.26□□□□□ -2.21
LINC01555Q8NAE3 AL355796.1-201ENST00000406706 323 ntBASIC1.26□□□□□ -2.21
LINC01555Q8NAE3 MIR548P-201ENST00000408336 84 ntBASIC1.26□□□□□ -2.21
LINC01555Q8NAE3 RNA5SP100-201ENST00000410903 110 ntBASIC1.26□□□□□ -2.21
LINC01555Q8NAE3 RNA5SP59-201ENST00000410922 110 ntBASIC1.26□□□□□ -2.21
LINC01555Q8NAE3 AC245047.4-201ENST00000433189 144 ntBASIC1.26□□□□□ -2.21
LINC01555Q8NAE3 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.26□□□□□ -2.21
LINC01555Q8NAE3 FCF1P4-201ENST00000448326 183 ntBASIC1.26□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 115.8 ms