Protein–RNA interactions for Protein: Q8N998

CCDC89, Coiled-coil domain-containing protein 89, humanhuman

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC89Q8N998 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC1.39□□□□□ -2.19
CCDC89Q8N998 RNU6-874P-201ENST00000362390 105 ntBASIC1.38□□□□□ -2.19
CCDC89Q8N998 RNU6-424P-201ENST00000384367 105 ntBASIC1.38□□□□□ -2.19
CCDC89Q8N998 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
CCDC89Q8N998 RNA5SP482-201ENST00000391269 118 ntBASIC1.38□□□□□ -2.19
CCDC89Q8N998 AC092423.1-201ENST00000430165 186 ntBASIC1.38□□□□□ -2.19
CCDC89Q8N998 CALM2P4-201ENST00000430810 426 ntBASIC1.38□□□□□ -2.19
CCDC89Q8N998 RPL23AP50-201ENST00000434149 455 ntBASIC1.38□□□□□ -2.19
CCDC89Q8N998 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.38□□□□□ -2.19
CCDC89Q8N998 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC1.38□□□□□ -2.19
CCDC89Q8N998 MTND3P10-201ENST00000450967 341 ntBASIC1.38□□□□□ -2.19
CCDC89Q8N998 RPL7P42-201ENST00000481005 679 ntBASIC1.38□□□□□ -2.19
CCDC89Q8N998 AC116353.2-201ENST00000505332 712 ntBASIC1.38□□□□□ -2.19
CCDC89Q8N998 SNORA70.22-201ENST00000517160 124 ntBASIC1.38□□□□□ -2.19
CCDC89Q8N998 AC090049.2-201ENST00000550377 109 ntBASIC1.38□□□□□ -2.19
CCDC89Q8N998 AC091178.2-201ENST00000584401 117 ntBASIC1.38□□□□□ -2.19
CCDC89Q8N998 AC092794.2-201ENST00000620933 563 ntBASIC1.38□□□□□ -2.19
CCDC89Q8N998 U6.115-201ENST00000636045 103 ntBASIC1.38□□□□□ -2.19
CCDC89Q8N998 MIR3674-201ENST00000636576 68 ntBASIC1.38□□□□□ -2.19
CCDC89Q8N998 RNU6-1310P-201ENST00000384153 107 ntBASIC1.37□□□□□ -2.19
CCDC89Q8N998 MIR873-201ENST00000401120 77 ntBASIC1.37□□□□□ -2.19
CCDC89Q8N998 AC015922.2-201ENST00000435593 184 ntBASIC1.37□□□□□ -2.19
CCDC89Q8N998 AL137792.2-201ENST00000443484 235 ntBASIC1.37□□□□□ -2.19
CCDC89Q8N998 RPL17P19-201ENST00000489069 552 ntBASIC1.37□□□□□ -2.19
CCDC89Q8N998 OR9P1P-201ENST00000496431 281 ntBASIC1.37□□□□□ -2.19
CCDC89Q8N998 SNORA31.4-201ENST00000516049 129 ntBASIC1.37□□□□□ -2.19
CCDC89Q8N998 SNORD116-28-201ENST00000516123 91 ntBASIC1.37□□□□□ -2.19
CCDC89Q8N998 MIR2355-201ENST00000517199 87 ntBASIC1.37□□□□□ -2.19
CCDC89Q8N998 AC068338.1-201ENST00000565567 176 ntBASIC1.37□□□□□ -2.19
CCDC89Q8N998 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.37□□□□□ -2.19
CCDC89Q8N998 AC027335.2-201ENST00000624030 375 ntBASIC1.37□□□□□ -2.19
CCDC89Q8N998 AC127459.3-201ENST00000624328 466 ntBASIC1.37□□□□□ -2.19
CCDC89Q8N998 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
CCDC89Q8N998 Y_RNA.88-201ENST00000363029 99 ntBASIC1.36□□□□□ -2.19
CCDC89Q8N998 RNU6-457P-201ENST00000363999 107 ntBASIC1.36□□□□□ -2.19
CCDC89Q8N998 MIR222-201ENST00000384992 110 ntBASIC1.36□□□□□ -2.19
CCDC89Q8N998 U8.16-201ENST00000391279 133 ntBASIC1.36□□□□□ -2.19
CCDC89Q8N998 AL451046.2-201ENST00000403074 277 ntBASIC1.36□□□□□ -2.19
CCDC89Q8N998 U8.22-201ENST00000459141 133 ntBASIC1.36□□□□□ -2.19
CCDC89Q8N998 AC069439.1-201ENST00000494739 167 ntBASIC1.36□□□□□ -2.19
CCDC89Q8N998 AC105758.1-201ENST00000506038 399 ntBASIC1.36□□□□□ -2.19
CCDC89Q8N998 SNORA40.9-201ENST00000515895 93 ntBASIC1.36□□□□□ -2.19
CCDC89Q8N998 RNU1-92P-201ENST00000517017 135 ntBASIC1.36□□□□□ -2.19
CCDC89Q8N998 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC1.36□□□□□ -2.19
CCDC89Q8N998 MIR7843-201ENST00000622274 79 ntBASIC1.36□□□□□ -2.19
CCDC89Q8N998 AC027514.1-201ENST00000588561 1603 ntBASIC1.36□□□□□ -2.19
CCDC89Q8N998 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.35□□□□□ -2.19
CCDC89Q8N998 SNORA1B-201ENST00000362535 133 ntBASIC1.35□□□□□ -2.19
CCDC89Q8N998 SNORA2.2-201ENST00000365473 135 ntBASIC1.35□□□□□ -2.19
CCDC89Q8N998 MIR520G-201ENST00000385064 90 ntBASIC1.35□□□□□ -2.19
CCDC89Q8N998 HSPE1P13-201ENST00000451143 297 ntBASIC1.35□□□□□ -2.19
CCDC89Q8N998 RNU7-12P-201ENST00000516030 62 ntBASIC1.35□□□□□ -2.19
CCDC89Q8N998 RNU4ATAC7P-201ENST00000516280 125 ntBASIC1.35□□□□□ -2.19
CCDC89Q8N998 AC005828.6-201ENST00000606610 232 ntBASIC1.35□□□□□ -2.19
CCDC89Q8N998 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC1.35□□□□□ -2.19
CCDC89Q8N998 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.35□□□□□ -2.19
CCDC89Q8N998 ZNF209P-201ENST00000593450 2304 ntBASIC1.35□□□□□ -2.19
CCDC89Q8N998 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.35□□□□□ -2.19
CCDC89Q8N998 SNORD114-7-201ENST00000362520 77 ntBASIC1.34□□□□□ -2.19
CCDC89Q8N998 RNU1-124P-201ENST00000363861 145 ntBASIC1.34□□□□□ -2.19
CCDC89Q8N998 Y_RNA.404-201ENST00000383978 102 ntBASIC1.34□□□□□ -2.19
CCDC89Q8N998 RNU6-318P-201ENST00000384283 103 ntBASIC1.34□□□□□ -2.19
CCDC89Q8N998 SNORA75.4-201ENST00000391278 119 ntBASIC1.34□□□□□ -2.19
CCDC89Q8N998 MIR1261-201ENST00000408659 82 ntBASIC1.34□□□□□ -2.19
CCDC89Q8N998 RNU6-1054P-201ENST00000411293 104 ntBASIC1.34□□□□□ -2.19
CCDC89Q8N998 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.34□□□□□ -2.19
CCDC89Q8N998 AC114482.1-201ENST00000418010 247 ntBASIC1.34□□□□□ -2.19
CCDC89Q8N998 RNU1-123P-201ENST00000458950 160 ntBASIC1.34□□□□□ -2.19
CCDC89Q8N998 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.34□□□□□ -2.19
CCDC89Q8N998 SCARNA16.2-201ENST00000516520 172 ntBASIC1.34□□□□□ -2.19
CCDC89Q8N998 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.34□□□□□ -2.19
CCDC89Q8N998 AL358944.1-201ENST00000528537 144 ntBASIC1.34□□□□□ -2.19
CCDC89Q8N998 AL357312.1-201ENST00000603879 298 ntBASIC1.34□□□□□ -2.19
CCDC89Q8N998 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.34□□□□□ -2.2
CCDC89Q8N998 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.33□□□□□ -2.2
CCDC89Q8N998 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
CCDC89Q8N998 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.33□□□□□ -2.2
CCDC89Q8N998 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
CCDC89Q8N998 AL049830.1-201ENST00000468034 425 ntBASIC1.33□□□□□ -2.2
CCDC89Q8N998 OR2A41P-201ENST00000473586 105 ntBASIC1.33□□□□□ -2.2
CCDC89Q8N998 RN7SL429P-201ENST00000479090 223 ntBASIC1.33□□□□□ -2.2
CCDC89Q8N998 RN7SL489P-201ENST00000486185 223 ntBASIC1.33□□□□□ -2.2
CCDC89Q8N998 RPS23P4-201ENST00000487908 423 ntBASIC1.33□□□□□ -2.2
CCDC89Q8N998 RN7SL327P-201ENST00000488659 223 ntBASIC1.33□□□□□ -2.2
CCDC89Q8N998 AC022493.2-201ENST00000506122 481 ntBASIC1.33□□□□□ -2.2
CCDC89Q8N998 SNORA31.2-201ENST00000516019 134 ntBASIC1.33□□□□□ -2.2
CCDC89Q8N998 RNU6-1291P-201ENST00000516591 104 ntBASIC1.33□□□□□ -2.2
CCDC89Q8N998 RNU7-30P-201ENST00000516835 62 ntBASIC1.33□□□□□ -2.2
CCDC89Q8N998 MIR4303-201ENST00000581299 66 ntBASIC1.33□□□□□ -2.2
CCDC89Q8N998 AC068790.6-201ENST00000602558 258 ntBASIC1.33□□□□□ -2.2
CCDC89Q8N998 RN7SL853P-201ENST00000617250 223 ntBASIC1.33□□□□□ -2.2
CCDC89Q8N998 AC005592.1-201ENST00000566527 1640 ntBASIC1.33□□□□□ -2.2
CCDC89Q8N998 AC091812.1-201ENST00000432235 1948 ntBASIC1.32□□□□□ -2.2
CCDC89Q8N998 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
CCDC89Q8N998 RNU6-454P-201ENST00000364292 107 ntBASIC1.32□□□□□ -2.2
CCDC89Q8N998 RNU6-767P-201ENST00000384132 107 ntBASIC1.32□□□□□ -2.2
CCDC89Q8N998 SNORD12B-201ENST00000410433 91 ntBASIC1.32□□□□□ -2.2
CCDC89Q8N998 RNU5A-5P-201ENST00000411054 116 ntBASIC1.32□□□□□ -2.2
CCDC89Q8N998 MIR2053-201ENST00000459295 91 ntBASIC1.32□□□□□ -2.2
CCDC89Q8N998 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.32□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms