Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 Y_RNA.529-201ENST00000384586 119 ntBASIC1.28□□□□□ -2.2
C9orf40Q8IXQ3 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.28□□□□□ -2.2
C9orf40Q8IXQ3 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.28□□□□□ -2.2
C9orf40Q8IXQ3 MTCO2P27-201ENST00000420740 428 ntBASIC1.28□□□□□ -2.2
C9orf40Q8IXQ3 MRPS18CP6-201ENST00000423587 223 ntBASIC1.28□□□□□ -2.2
C9orf40Q8IXQ3 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.28□□□□□ -2.2
C9orf40Q8IXQ3 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.28□□□□□ -2.2
C9orf40Q8IXQ3 Y_RNA.632-201ENST00000459189 102 ntBASIC1.28□□□□□ -2.2
C9orf40Q8IXQ3 RNU7-169P-201ENST00000459456 61 ntBASIC1.28□□□□□ -2.2
C9orf40Q8IXQ3 RPS27P22-201ENST00000478056 241 ntBASIC1.28□□□□□ -2.2
C9orf40Q8IXQ3 AC010469.2-201ENST00000496412 480 ntBASIC1.28□□□□□ -2.2
C9orf40Q8IXQ3 AC010598.1-201ENST00000510378 103 ntBASIC1.28□□□□□ -2.2
C9orf40Q8IXQ3 AL117351.2-201ENST00000513571 157 ntBASIC1.28□□□□□ -2.2
C9orf40Q8IXQ3 RNU7-99P-201ENST00000516271 62 ntBASIC1.28□□□□□ -2.2
C9orf40Q8IXQ3 RNA5SP61-201ENST00000516453 100 ntBASIC1.28□□□□□ -2.2
C9orf40Q8IXQ3 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.28□□□□□ -2.2
C9orf40Q8IXQ3 MIR4709-201ENST00000577272 72 ntBASIC1.28□□□□□ -2.2
C9orf40Q8IXQ3 MIR4421-201ENST00000578133 69 ntBASIC1.28□□□□□ -2.2
C9orf40Q8IXQ3 SNORA77B-201ENST00000578179 125 ntBASIC1.28□□□□□ -2.2
C9orf40Q8IXQ3 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.28□□□□□ -2.2
C9orf40Q8IXQ3 MIR4438-201ENST00000585271 93 ntBASIC1.28□□□□□ -2.2
C9orf40Q8IXQ3 AC084781.2-201ENST00000615568 161 ntBASIC1.28□□□□□ -2.2
C9orf40Q8IXQ3 AC006435.5-201ENST00000624486 112 ntBASIC1.28□□□□□ -2.2
C9orf40Q8IXQ3 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.28□□□□□ -2.21
C9orf40Q8IXQ3 WWP1P1-201ENST00000466609 2769 ntBASIC1.27□□□□□ -2.21
C9orf40Q8IXQ3 RNU6-490P-201ENST00000362985 107 ntBASIC1.27□□□□□ -2.21
C9orf40Q8IXQ3 RNY3P11-201ENST00000364153 102 ntBASIC1.27□□□□□ -2.21
C9orf40Q8IXQ3 Y_RNA.263-201ENST00000364659 114 ntBASIC1.27□□□□□ -2.21
C9orf40Q8IXQ3 RNU6-338P-201ENST00000383888 105 ntBASIC1.27□□□□□ -2.21
C9orf40Q8IXQ3 MIR559-201ENST00000385188 96 ntBASIC1.27□□□□□ -2.21
C9orf40Q8IXQ3 RPL21P1-201ENST00000399532 476 ntBASIC1.27□□□□□ -2.21
C9orf40Q8IXQ3 RNA5SP475-201ENST00000410568 110 ntBASIC1.27□□□□□ -2.21
C9orf40Q8IXQ3 Y_RNA.605-201ENST00000410577 105 ntBASIC1.27□□□□□ -2.21
C9orf40Q8IXQ3 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.27□□□□□ -2.21
C9orf40Q8IXQ3 RAB28P5-201ENST00000427490 651 ntBASIC1.27□□□□□ -2.21
C9orf40Q8IXQ3 CEP57L1P1-201ENST00000430943 1201 ntBASIC1.27□□□□□ -2.21
C9orf40Q8IXQ3 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.27□□□□□ -2.21
C9orf40Q8IXQ3 AL606517.2-201ENST00000442855 241 ntBASIC1.27□□□□□ -2.21
C9orf40Q8IXQ3 MRPS10P1-201ENST00000448483 130 ntBASIC1.27□□□□□ -2.21
C9orf40Q8IXQ3 Y_RNA.638-201ENST00000459374 113 ntBASIC1.27□□□□□ -2.21
C9orf40Q8IXQ3 RNU7-34P-201ENST00000459394 64 ntBASIC1.27□□□□□ -2.21
C9orf40Q8IXQ3 RPS26P45-201ENST00000471748 340 ntBASIC1.27□□□□□ -2.21
C9orf40Q8IXQ3 RNU7-128P-201ENST00000517247 62 ntBASIC1.27□□□□□ -2.21
C9orf40Q8IXQ3 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.27□□□□□ -2.21
C9orf40Q8IXQ3 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.27□□□□□ -2.21
C9orf40Q8IXQ3 AC023157.2-201ENST00000540596 141 ntBASIC1.27□□□□□ -2.21
C9orf40Q8IXQ3 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.27□□□□□ -2.21
C9orf40Q8IXQ3 AC095038.3-201ENST00000634439 195 ntBASIC1.27□□□□□ -2.21
C9orf40Q8IXQ3 MIR3674-201ENST00000636576 68 ntBASIC1.27□□□□□ -2.21
C9orf40Q8IXQ3 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
C9orf40Q8IXQ3 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
C9orf40Q8IXQ3 MIR410-201ENST00000362222 80 ntBASIC1.26□□□□□ -2.21
C9orf40Q8IXQ3 Y_RNA.67-201ENST00000362870 100 ntBASIC1.26□□□□□ -2.21
C9orf40Q8IXQ3 RNU6-1040P-201ENST00000383974 107 ntBASIC1.26□□□□□ -2.21
C9orf40Q8IXQ3 SNORA20B-201ENST00000384220 132 ntBASIC1.26□□□□□ -2.21
C9orf40Q8IXQ3 AL355796.1-201ENST00000406706 323 ntBASIC1.26□□□□□ -2.21
C9orf40Q8IXQ3 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.26□□□□□ -2.21
C9orf40Q8IXQ3 AC099799.1-201ENST00000439809 192 ntBASIC1.26□□□□□ -2.21
C9orf40Q8IXQ3 RPS27P1-201ENST00000450552 247 ntBASIC1.26□□□□□ -2.21
C9orf40Q8IXQ3 HSPE1P24-201ENST00000450782 238 ntBASIC1.26□□□□□ -2.21
C9orf40Q8IXQ3 AC009474.2-201ENST00000451383 136 ntBASIC1.26□□□□□ -2.21
C9orf40Q8IXQ3 AC027575.1-201ENST00000481064 460 ntBASIC1.26□□□□□ -2.21
C9orf40Q8IXQ3 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC1.26□□□□□ -2.21
C9orf40Q8IXQ3 RNU6-699P-201ENST00000517081 110 ntBASIC1.26□□□□□ -2.21
C9orf40Q8IXQ3 AP002001.1-203ENST00000534002 267 ntBASIC1.26□□□□□ -2.21
C9orf40Q8IXQ3 MIR3684-201ENST00000579779 74 ntBASIC1.26□□□□□ -2.21
C9orf40Q8IXQ3 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.26□□□□□ -2.21
C9orf40Q8IXQ3 AC022217.4-201ENST00000604389 163 ntBASIC1.26□□□□□ -2.21
C9orf40Q8IXQ3 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.26□□□□□ -2.21
C9orf40Q8IXQ3 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
C9orf40Q8IXQ3 RNU6-203P-201ENST00000384038 104 ntBASIC1.25□□□□□ -2.21
C9orf40Q8IXQ3 RNU6-950P-201ENST00000384651 107 ntBASIC1.25□□□□□ -2.21
C9orf40Q8IXQ3 RNU6-955P-201ENST00000410497 104 ntBASIC1.25□□□□□ -2.21
C9orf40Q8IXQ3 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.25□□□□□ -2.21
C9orf40Q8IXQ3 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.25□□□□□ -2.21
C9orf40Q8IXQ3 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.25□□□□□ -2.21
C9orf40Q8IXQ3 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC1.25□□□□□ -2.21
C9orf40Q8IXQ3 SNORD19B-201ENST00000459623 84 ntBASIC1.25□□□□□ -2.21
C9orf40Q8IXQ3 RNU6-408P-201ENST00000515910 100 ntBASIC1.25□□□□□ -2.21
C9orf40Q8IXQ3 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.25□□□□□ -2.21
C9orf40Q8IXQ3 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.25□□□□□ -2.21
C9orf40Q8IXQ3 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC1.25□□□□□ -2.21
C9orf40Q8IXQ3 AC093027.1-201ENST00000546698 429 ntBASIC1.25□□□□□ -2.21
C9orf40Q8IXQ3 AP001094.1-201ENST00000579805 193 ntBASIC1.25□□□□□ -2.21
C9orf40Q8IXQ3 AL929325.1-201ENST00000603096 117 ntBASIC1.25□□□□□ -2.21
C9orf40Q8IXQ3 U2.1-201ENST00000618978 145 ntBASIC1.25□□□□□ -2.21
C9orf40Q8IXQ3 MIR8063-201ENST00000621930 81 ntBASIC1.25□□□□□ -2.21
C9orf40Q8IXQ3 AC112487.2-201ENST00000637950 304 ntBASIC1.25□□□□□ -2.21
C9orf40Q8IXQ3 ICE2P2-201ENST00000483823 2787 ntBASIC1.25□□□□□ -2.21
C9orf40Q8IXQ3 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.25□□□□□ -2.21
C9orf40Q8IXQ3 SNORA7.1-201ENST00000363750 139 ntBASIC1.24□□□□□ -2.21
C9orf40Q8IXQ3 Y_RNA.187-201ENST00000363918 113 ntBASIC1.24□□□□□ -2.21
C9orf40Q8IXQ3 RNU6-454P-201ENST00000364292 107 ntBASIC1.24□□□□□ -2.21
C9orf40Q8IXQ3 RNU6-407P-201ENST00000365280 104 ntBASIC1.24□□□□□ -2.21
C9orf40Q8IXQ3 RNU6-926P-201ENST00000384075 107 ntBASIC1.24□□□□□ -2.21
C9orf40Q8IXQ3 RNU6-1310P-201ENST00000384153 107 ntBASIC1.24□□□□□ -2.21
C9orf40Q8IXQ3 MIR628-201ENST00000385229 95 ntBASIC1.24□□□□□ -2.21
C9orf40Q8IXQ3 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.24□□□□□ -2.21
C9orf40Q8IXQ3 AC010154.1-201ENST00000425857 269 ntBASIC1.24□□□□□ -2.21
C9orf40Q8IXQ3 AC245047.3-201ENST00000429428 127 ntBASIC1.24□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 198.3 ms