Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 RNU7-128P-201ENST00000517247 62 ntBASIC1.93□□□□□ -2.1
LRRTM4Q86VH4 RN7SKP295-201ENST00000517264 153 ntBASIC1.93□□□□□ -2.1
LRRTM4Q86VH4 RPL21P9-201ENST00000556149 474 ntBASIC1.93□□□□□ -2.1
LRRTM4Q86VH4 MIR4709-201ENST00000577272 72 ntBASIC1.93□□□□□ -2.1
LRRTM4Q86VH4 MIR5089-201ENST00000580047 84 ntBASIC1.93□□□□□ -2.1
LRRTM4Q86VH4 AL121655.1-201ENST00000605811 308 ntBASIC1.93□□□□□ -2.1
LRRTM4Q86VH4 SNORD58B-201ENST00000607313 66 ntBASIC1.93□□□□□ -2.1
LRRTM4Q86VH4 U6.108-201ENST00000637764 58 ntBASIC1.93□□□□□ -2.1
LRRTM4Q86VH4 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.93□□□□□ -2.1
LRRTM4Q86VH4 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
LRRTM4Q86VH4 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.93□□□□□ -2.1
LRRTM4Q86VH4 RNU1-22P-201ENST00000363334 158 ntBASIC1.92□□□□□ -2.1
LRRTM4Q86VH4 RNU4-50P-201ENST00000364361 141 ntBASIC1.92□□□□□ -2.1
LRRTM4Q86VH4 RNU6-20P-201ENST00000384106 107 ntBASIC1.92□□□□□ -2.1
LRRTM4Q86VH4 MCFD2P1-201ENST00000417812 300 ntBASIC1.92□□□□□ -2.1
LRRTM4Q86VH4 AC005002.2-201ENST00000438228 269 ntBASIC1.92□□□□□ -2.1
LRRTM4Q86VH4 HMGN2P23-201ENST00000456759 269 ntBASIC1.92□□□□□ -2.1
LRRTM4Q86VH4 RNU7-34P-201ENST00000459394 64 ntBASIC1.92□□□□□ -2.1
LRRTM4Q86VH4 AC093852.1-201ENST00000503587 266 ntBASIC1.92□□□□□ -2.1
LRRTM4Q86VH4 AC008834.1-201ENST00000511612 175 ntBASIC1.92□□□□□ -2.1
LRRTM4Q86VH4 RNA5SP20-201ENST00000515976 84 ntBASIC1.92□□□□□ -2.1
LRRTM4Q86VH4 Y_RNA.713-201ENST00000517013 96 ntBASIC1.92□□□□□ -2.1
LRRTM4Q86VH4 RNU2-12P-201ENST00000517216 168 ntBASIC1.92□□□□□ -2.1
LRRTM4Q86VH4 AC073413.2-201ENST00000604332 360 ntBASIC1.92□□□□□ -2.1
LRRTM4Q86VH4 AC005828.6-201ENST00000606610 232 ntBASIC1.92□□□□□ -2.1
LRRTM4Q86VH4 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC1.92□□□□□ -2.1
LRRTM4Q86VH4 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.92□□□□□ -2.1
LRRTM4Q86VH4 SNORD114-7-201ENST00000362520 77 ntBASIC1.91□□□□□ -2.1
LRRTM4Q86VH4 RNU6-626P-201ENST00000363354 107 ntBASIC1.91□□□□□ -2.1
LRRTM4Q86VH4 Y_RNA.243-201ENST00000364481 109 ntBASIC1.91□□□□□ -2.1
LRRTM4Q86VH4 Y_RNA.813-201ENST00000364639 102 ntBASIC1.91□□□□□ -2.1
LRRTM4Q86VH4 RNA5SP109-201ENST00000391010 116 ntBASIC1.91□□□□□ -2.1
LRRTM4Q86VH4 RNU2-40P-201ENST00000410833 196 ntBASIC1.91□□□□□ -2.1
LRRTM4Q86VH4 AC245047.3-201ENST00000429428 127 ntBASIC1.91□□□□□ -2.1
LRRTM4Q86VH4 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.91□□□□□ -2.1
LRRTM4Q86VH4 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.91□□□□□ -2.1
LRRTM4Q86VH4 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.91□□□□□ -2.1
LRRTM4Q86VH4 AC010205.1-201ENST00000616668 449 ntBASIC1.91□□□□□ -2.1
LRRTM4Q86VH4 AC007485.1-201ENST00000616755 206 ntBASIC1.91□□□□□ -2.1
LRRTM4Q86VH4 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
LRRTM4Q86VH4 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
LRRTM4Q86VH4 AC006026.1-201ENST00000444025 1803 ntBASIC1.91□□□□□ -2.1
LRRTM4Q86VH4 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.91□□□□□ -2.1
LRRTM4Q86VH4 AC005592.1-201ENST00000566527 1640 ntBASIC1.91□□□□□ -2.1
LRRTM4Q86VH4 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.9□□□□□ -2.1
LRRTM4Q86VH4 Y_RNA.424-201ENST00000384063 103 ntBASIC1.9□□□□□ -2.11
LRRTM4Q86VH4 RNU6-376P-201ENST00000384731 106 ntBASIC1.9□□□□□ -2.11
LRRTM4Q86VH4 MIR562-201ENST00000384894 95 ntBASIC1.9□□□□□ -2.11
LRRTM4Q86VH4 MIR1302-11-201ENST00000408051 138 ntBASIC1.9□□□□□ -2.11
LRRTM4Q86VH4 MIR1302-9-201ENST00000408365 138 ntBASIC1.9□□□□□ -2.11
LRRTM4Q86VH4 MIR1302-10-201ENST00000408734 138 ntBASIC1.9□□□□□ -2.11
LRRTM4Q86VH4 RNU2-54P-201ENST00000410299 190 ntBASIC1.9□□□□□ -2.11
LRRTM4Q86VH4 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.9□□□□□ -2.11
LRRTM4Q86VH4 AL445685.2-201ENST00000422551 342 ntBASIC1.9□□□□□ -2.11
LRRTM4Q86VH4 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.9□□□□□ -2.11
LRRTM4Q86VH4 JTBP1-201ENST00000441314 247 ntBASIC1.9□□□□□ -2.11
LRRTM4Q86VH4 Y_RNA.631-201ENST00000459607 101 ntBASIC1.9□□□□□ -2.11
LRRTM4Q86VH4 RPS26P55-201ENST00000471178 356 ntBASIC1.9□□□□□ -2.11
LRRTM4Q86VH4 SNORA25.10-201ENST00000515926 124 ntBASIC1.9□□□□□ -2.11
LRRTM4Q86VH4 MIR1302-2-201ENST00000607096 138 ntBASIC1.9□□□□□ -2.11
LRRTM4Q86VH4 AC018630.2-201ENST00000534866 2403 ntBASIC1.9□□□□□ -2.11
LRRTM4Q86VH4 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
LRRTM4Q86VH4 SNORD115-30-201ENST00000364117 82 ntBASIC1.89□□□□□ -2.11
LRRTM4Q86VH4 RNA5SP138-201ENST00000365098 114 ntBASIC1.89□□□□□ -2.11
LRRTM4Q86VH4 SNORD14.1-201ENST00000365609 90 ntBASIC1.89□□□□□ -2.11
LRRTM4Q86VH4 RPL21P1-201ENST00000399532 476 ntBASIC1.89□□□□□ -2.11
LRRTM4Q86VH4 MRPL42P3-201ENST00000401492 326 ntBASIC1.89□□□□□ -2.11
LRRTM4Q86VH4 AL390729.2-201ENST00000416137 156 ntBASIC1.89□□□□□ -2.11
LRRTM4Q86VH4 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.89□□□□□ -2.11
LRRTM4Q86VH4 MTND4P19-201ENST00000446659 478 ntBASIC1.89□□□□□ -2.11
LRRTM4Q86VH4 RNU6-155P-201ENST00000516347 100 ntBASIC1.89□□□□□ -2.11
LRRTM4Q86VH4 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.89□□□□□ -2.11
LRRTM4Q86VH4 RNU6-988P-201ENST00000519081 107 ntBASIC1.89□□□□□ -2.11
LRRTM4Q86VH4 AC040926.1-201ENST00000530195 238 ntBASIC1.89□□□□□ -2.11
LRRTM4Q86VH4 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.89□□□□□ -2.11
LRRTM4Q86VH4 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.89□□□□□ -2.11
LRRTM4Q86VH4 SNRPGP19-201ENST00000603826 189 ntBASIC1.89□□□□□ -2.11
LRRTM4Q86VH4 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.89□□□□□ -2.11
LRRTM4Q86VH4 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
LRRTM4Q86VH4 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.89□□□□□ -2.11
LRRTM4Q86VH4 AC100821.1-201ENST00000523153 2479 ntBASIC1.88□□□□□ -2.11
LRRTM4Q86VH4 MIR424-201ENST00000362227 98 ntBASIC1.88□□□□□ -2.11
LRRTM4Q86VH4 SNORA4.2-201ENST00000365313 147 ntBASIC1.88□□□□□ -2.11
LRRTM4Q86VH4 MIR583-201ENST00000384846 75 ntBASIC1.88□□□□□ -2.11
LRRTM4Q86VH4 RNU6-308P-201ENST00000390957 107 ntBASIC1.88□□□□□ -2.11
LRRTM4Q86VH4 MIR1289-2-201ENST00000408360 111 ntBASIC1.88□□□□□ -2.11
LRRTM4Q86VH4 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.88□□□□□ -2.11
LRRTM4Q86VH4 MTCO2P12-201ENST00000427426 682 ntBASIC1.88□□□□□ -2.11
LRRTM4Q86VH4 U8.20-201ENST00000459445 131 ntBASIC1.88□□□□□ -2.11
LRRTM4Q86VH4 RNA5SP182-201ENST00000516064 82 ntBASIC1.88□□□□□ -2.11
LRRTM4Q86VH4 AC055872.1-201ENST00000570978 278 ntBASIC1.88□□□□□ -2.11
LRRTM4Q86VH4 AC022217.4-201ENST00000604389 163 ntBASIC1.88□□□□□ -2.11
LRRTM4Q86VH4 uc_338.20-201ENST00000621563 178 ntBASIC1.88□□□□□ -2.11
LRRTM4Q86VH4 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.88□□□□□ -2.11
LRRTM4Q86VH4 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
LRRTM4Q86VH4 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
LRRTM4Q86VH4 Y_RNA.80-201ENST00000362996 102 ntBASIC1.87□□□□□ -2.11
LRRTM4Q86VH4 Y_RNA.124-201ENST00000363339 93 ntBASIC1.87□□□□□ -2.11
LRRTM4Q86VH4 Y_RNA.128-201ENST00000363391 112 ntBASIC1.87□□□□□ -2.11
LRRTM4Q86VH4 RNU6-324P-201ENST00000363957 106 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms