Protein–RNA interactions for Protein: Q6PEY1

TMEM88, Transmembrane protein 88, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88Q6PEY1 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.08□□□□□ -2.08
TMEM88Q6PEY1 AC006435.5-201ENST00000624486 112 ntBASIC2.08□□□□□ -2.08
TMEM88Q6PEY1 CENPCP1-201ENST00000533085 2578 ntBASIC2.08□□□□□ -2.08
TMEM88Q6PEY1 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
TMEM88Q6PEY1 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
TMEM88Q6PEY1 Y_RNA.136-201ENST00000363444 102 ntBASIC2.07□□□□□ -2.08
TMEM88Q6PEY1 SNORA9.2-201ENST00000365361 133 ntBASIC2.07□□□□□ -2.08
TMEM88Q6PEY1 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.07□□□□□ -2.08
TMEM88Q6PEY1 SNORD116-13-201ENST00000384408 92 ntBASIC2.07□□□□□ -2.08
TMEM88Q6PEY1 RNA5SP501-201ENST00000410990 112 ntBASIC2.07□□□□□ -2.08
TMEM88Q6PEY1 EBAG9P1-201ENST00000418955 543 ntBASIC2.07□□□□□ -2.08
TMEM88Q6PEY1 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.07□□□□□ -2.08
TMEM88Q6PEY1 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.07□□□□□ -2.08
TMEM88Q6PEY1 TRBV12-1-201ENST00000479785 344 ntBASIC2.07□□□□□ -2.08
TMEM88Q6PEY1 AC097462.1-201ENST00000514125 324 ntBASIC2.07□□□□□ -2.08
TMEM88Q6PEY1 RNU2-19P-201ENST00000517288 84 ntBASIC2.07□□□□□ -2.08
TMEM88Q6PEY1 MIR5694-201ENST00000581190 76 ntBASIC2.07□□□□□ -2.08
TMEM88Q6PEY1 MIR7106-201ENST00000612419 65 ntBASIC2.07□□□□□ -2.08
TMEM88Q6PEY1 AC008555.8-201ENST00000623602 2168 ntBASIC2.07□□□□□ -2.08
TMEM88Q6PEY1 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
TMEM88Q6PEY1 MIR335-201ENST00000362173 94 ntBASIC2.06□□□□□ -2.08
TMEM88Q6PEY1 RNA5SP276-201ENST00000362580 94 ntBASIC2.06□□□□□ -2.08
TMEM88Q6PEY1 RNU1-22P-201ENST00000363334 158 ntBASIC2.06□□□□□ -2.08
TMEM88Q6PEY1 RNU6-1048P-201ENST00000364054 107 ntBASIC2.06□□□□□ -2.08
TMEM88Q6PEY1 Y_RNA.341-201ENST00000365341 102 ntBASIC2.06□□□□□ -2.08
TMEM88Q6PEY1 RNU1-51P-201ENST00000365345 176 ntBASIC2.06□□□□□ -2.08
TMEM88Q6PEY1 SNORA8-201ENST00000384574 139 ntBASIC2.06□□□□□ -2.08
TMEM88Q6PEY1 RPL39P38-201ENST00000467018 153 ntBASIC2.06□□□□□ -2.08
TMEM88Q6PEY1 AC055731.1-201ENST00000474387 401 ntBASIC2.06□□□□□ -2.08
TMEM88Q6PEY1 Y_RNA.673-201ENST00000516306 88 ntBASIC2.06□□□□□ -2.08
TMEM88Q6PEY1 Y_RNA.680-201ENST00000516441 93 ntBASIC2.06□□□□□ -2.08
TMEM88Q6PEY1 RNU1-142P-201ENST00000516682 145 ntBASIC2.06□□□□□ -2.08
TMEM88Q6PEY1 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.06□□□□□ -2.08
TMEM88Q6PEY1 AC073413.2-201ENST00000604332 360 ntBASIC2.06□□□□□ -2.08
TMEM88Q6PEY1 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.06□□□□□ -2.08
TMEM88Q6PEY1 SCARNA15.3-201ENST00000626315 122 ntBASIC2.06□□□□□ -2.08
TMEM88Q6PEY1 SCARNA4.1-201ENST00000628597 123 ntBASIC2.06□□□□□ -2.08
TMEM88Q6PEY1 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.06□□□□□ -2.08
TMEM88Q6PEY1 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
TMEM88Q6PEY1 AC007336.1-201ENST00000576365 3828 ntBASIC2.05□□□□□ -2.08
TMEM88Q6PEY1 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
TMEM88Q6PEY1 SNORD27-201ENST00000363981 72 ntBASIC2.05□□□□□ -2.08
TMEM88Q6PEY1 SNORA16B-201ENST00000364674 135 ntBASIC2.05□□□□□ -2.08
TMEM88Q6PEY1 Y_RNA.277-201ENST00000364754 102 ntBASIC2.05□□□□□ -2.08
TMEM88Q6PEY1 RNU6-851P-201ENST00000384565 107 ntBASIC2.05□□□□□ -2.08
TMEM88Q6PEY1 RNU6-376P-201ENST00000384731 106 ntBASIC2.05□□□□□ -2.08
TMEM88Q6PEY1 AL603910.2-201ENST00000407268 136 ntBASIC2.05□□□□□ -2.08
TMEM88Q6PEY1 RNU6-710P-201ENST00000410424 105 ntBASIC2.05□□□□□ -2.08
TMEM88Q6PEY1 RNA5SP511-201ENST00000410487 115 ntBASIC2.05□□□□□ -2.08
TMEM88Q6PEY1 CST2P1-201ENST00000425770 87 ntBASIC2.05□□□□□ -2.08
TMEM88Q6PEY1 AL163195.1-201ENST00000496941 348 ntBASIC2.05□□□□□ -2.08
TMEM88Q6PEY1 MTND1P19-201ENST00000511780 315 ntBASIC2.05□□□□□ -2.08
TMEM88Q6PEY1 MIR3128-201ENST00000581957 66 ntBASIC2.05□□□□□ -2.08
TMEM88Q6PEY1 AL359075.3-201ENST00000613288 217 ntBASIC2.05□□□□□ -2.08
TMEM88Q6PEY1 U6.108-201ENST00000637764 58 ntBASIC2.05□□□□□ -2.08
TMEM88Q6PEY1 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
TMEM88Q6PEY1 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.05□□□□□ -2.08
TMEM88Q6PEY1 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC2.04□□□□□ -2.08
TMEM88Q6PEY1 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.04□□□□□ -2.08
TMEM88Q6PEY1 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.04□□□□□ -2.08
TMEM88Q6PEY1 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
TMEM88Q6PEY1 Y_RNA.44-201ENST00000362676 108 ntBASIC2.04□□□□□ -2.08
TMEM88Q6PEY1 Y_RNA.117-201ENST00000363294 101 ntBASIC2.04□□□□□ -2.08
TMEM88Q6PEY1 Y_RNA.350-201ENST00000365409 98 ntBASIC2.04□□□□□ -2.08
TMEM88Q6PEY1 Y_RNA.401-201ENST00000383965 117 ntBASIC2.04□□□□□ -2.08
TMEM88Q6PEY1 Y_RNA.447-201ENST00000384184 113 ntBASIC2.04□□□□□ -2.08
TMEM88Q6PEY1 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
TMEM88Q6PEY1 SNORA11.4-201ENST00000408823 129 ntBASIC2.04□□□□□ -2.08
TMEM88Q6PEY1 RNU2-14P-201ENST00000411053 191 ntBASIC2.04□□□□□ -2.08
TMEM88Q6PEY1 AL139132.1-201ENST00000431587 344 ntBASIC2.04□□□□□ -2.08
TMEM88Q6PEY1 AC107083.1-201ENST00000439643 279 ntBASIC2.04□□□□□ -2.08
TMEM88Q6PEY1 MTND4LP30-201ENST00000454092 297 ntBASIC2.04□□□□□ -2.08
TMEM88Q6PEY1 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.04□□□□□ -2.08
TMEM88Q6PEY1 RNU7-128P-201ENST00000517247 62 ntBASIC2.04□□□□□ -2.08
TMEM88Q6PEY1 MIR5092-201ENST00000583139 88 ntBASIC2.04□□□□□ -2.08
TMEM88Q6PEY1 MIR4635-201ENST00000583759 79 ntBASIC2.04□□□□□ -2.08
TMEM88Q6PEY1 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC2.04□□□□□ -2.08
TMEM88Q6PEY1 U2.14-201ENST00000615943 113 ntBASIC2.04□□□□□ -2.08
TMEM88Q6PEY1 AC134026.1-201ENST00000623249 2239 ntBASIC2.04□□□□□ -2.08
TMEM88Q6PEY1 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.04□□□□□ -2.08
TMEM88Q6PEY1 SNORD114-7-201ENST00000362520 77 ntBASIC2.03□□□□□ -2.08
TMEM88Q6PEY1 SNORA5B-201ENST00000363786 132 ntBASIC2.03□□□□□ -2.08
TMEM88Q6PEY1 SNORA80A-201ENST00000363922 136 ntBASIC2.03□□□□□ -2.08
TMEM88Q6PEY1 RNU6-801P-201ENST00000364087 105 ntBASIC2.03□□□□□ -2.08
TMEM88Q6PEY1 RNU6-740P-201ENST00000364734 105 ntBASIC2.03□□□□□ -2.08
TMEM88Q6PEY1 RNU6-117P-201ENST00000365415 107 ntBASIC2.03□□□□□ -2.08
TMEM88Q6PEY1 MIR17-201ENST00000385012 84 ntBASIC2.03□□□□□ -2.08
TMEM88Q6PEY1 RNU6-651P-201ENST00000411040 105 ntBASIC2.03□□□□□ -2.08
TMEM88Q6PEY1 RPS15AP28-201ENST00000435088 386 ntBASIC2.03□□□□□ -2.08
TMEM88Q6PEY1 HSPE1P21-201ENST00000438283 308 ntBASIC2.03□□□□□ -2.08
TMEM88Q6PEY1 RPS20P10-201ENST00000451209 253 ntBASIC2.03□□□□□ -2.08
TMEM88Q6PEY1 RNU7-99P-201ENST00000516271 62 ntBASIC2.03□□□□□ -2.08
TMEM88Q6PEY1 SNORA27.4-201ENST00000516650 95 ntBASIC2.03□□□□□ -2.08
TMEM88Q6PEY1 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.03□□□□□ -2.08
TMEM88Q6PEY1 AC069114.2-201ENST00000604699 304 ntBASIC2.03□□□□□ -2.08
TMEM88Q6PEY1 AC004832.4-201ENST00000608952 331 ntBASIC2.03□□□□□ -2.08
TMEM88Q6PEY1 AC068647.2-201ENST00000637380 353 ntBASIC2.03□□□□□ -2.08
TMEM88Q6PEY1 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
TMEM88Q6PEY1 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.09
TMEM88Q6PEY1 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms