Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 HMGN1P13-201ENST00000505795 138 ntBASIC1.5□□□□□ -2.17
RFWD3Q6PCD5 AC022254.1-201ENST00000567857 235 ntBASIC1.5□□□□□ -2.17
RFWD3Q6PCD5 AC006600.1-201ENST00000572529 153 ntBASIC1.5□□□□□ -2.17
RFWD3Q6PCD5 MIR3198-2-201ENST00000577868 80 ntBASIC1.5□□□□□ -2.17
RFWD3Q6PCD5 MIR5094-201ENST00000578766 85 ntBASIC1.5□□□□□ -2.17
RFWD3Q6PCD5 AC092447.9-201ENST00000603395 144 ntBASIC1.5□□□□□ -2.17
RFWD3Q6PCD5 AC016925.2-201ENST00000605108 242 ntBASIC1.5□□□□□ -2.17
RFWD3Q6PCD5 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.5□□□□□ -2.17
RFWD3Q6PCD5 AL138825.1-201ENST00000618587 192 ntBASIC1.5□□□□□ -2.17
RFWD3Q6PCD5 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.5□□□□□ -2.17
RFWD3Q6PCD5 uc_338.22-201ENST00000622722 187 ntBASIC1.5□□□□□ -2.17
RFWD3Q6PCD5 AL160413.1-201ENST00000622780 310 ntBASIC1.5□□□□□ -2.17
RFWD3Q6PCD5 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
RFWD3Q6PCD5 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.5□□□□□ -2.17
RFWD3Q6PCD5 Y_RNA.27-201ENST00000362540 103 ntBASIC1.49□□□□□ -2.17
RFWD3Q6PCD5 RNU6-1266P-201ENST00000362794 105 ntBASIC1.49□□□□□ -2.17
RFWD3Q6PCD5 RNA5SP100-201ENST00000410903 110 ntBASIC1.49□□□□□ -2.17
RFWD3Q6PCD5 RNA5SP59-201ENST00000410922 110 ntBASIC1.49□□□□□ -2.17
RFWD3Q6PCD5 AC009310.1-201ENST00000414414 451 ntBASIC1.49□□□□□ -2.17
RFWD3Q6PCD5 MTCO3P19-201ENST00000415864 321 ntBASIC1.49□□□□□ -2.17
RFWD3Q6PCD5 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.49□□□□□ -2.17
RFWD3Q6PCD5 AL137792.2-201ENST00000443484 235 ntBASIC1.49□□□□□ -2.17
RFWD3Q6PCD5 RNU6-625P-201ENST00000459412 107 ntBASIC1.49□□□□□ -2.17
RFWD3Q6PCD5 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.49□□□□□ -2.17
RFWD3Q6PCD5 RNU1-92P-201ENST00000517017 135 ntBASIC1.49□□□□□ -2.17
RFWD3Q6PCD5 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.49□□□□□ -2.17
RFWD3Q6PCD5 SNORA44.1-201ENST00000517031 108 ntBASIC1.49□□□□□ -2.17
RFWD3Q6PCD5 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.49□□□□□ -2.17
RFWD3Q6PCD5 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC1.49□□□□□ -2.17
RFWD3Q6PCD5 AC069114.2-201ENST00000604699 304 ntBASIC1.49□□□□□ -2.17
RFWD3Q6PCD5 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.49□□□□□ -2.17
RFWD3Q6PCD5 MIR7974-201ENST00000615835 79 ntBASIC1.49□□□□□ -2.17
RFWD3Q6PCD5 AC090971.5-201ENST00000621102 293 ntBASIC1.49□□□□□ -2.17
RFWD3Q6PCD5 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.49□□□□□ -2.17
RFWD3Q6PCD5 ZNF209P-201ENST00000593450 2304 ntBASIC1.48□□□□□ -2.17
RFWD3Q6PCD5 MIR369-201ENST00000362155 70 ntBASIC1.48□□□□□ -2.17
RFWD3Q6PCD5 MIR515-2-201ENST00000384883 83 ntBASIC1.48□□□□□ -2.17
RFWD3Q6PCD5 MIR515-1-201ENST00000384884 83 ntBASIC1.48□□□□□ -2.17
RFWD3Q6PCD5 SNORD78.2-201ENST00000391076 69 ntBASIC1.48□□□□□ -2.17
RFWD3Q6PCD5 RN7SKP51-201ENST00000410781 304 ntBASIC1.48□□□□□ -2.17
RFWD3Q6PCD5 RAB28P5-201ENST00000427490 651 ntBASIC1.48□□□□□ -2.17
RFWD3Q6PCD5 FCF1P4-201ENST00000448326 183 ntBASIC1.48□□□□□ -2.17
RFWD3Q6PCD5 RNU4-77P-201ENST00000516692 156 ntBASIC1.48□□□□□ -2.17
RFWD3Q6PCD5 AL161670.1-201ENST00000554348 137 ntBASIC1.48□□□□□ -2.17
RFWD3Q6PCD5 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.48□□□□□ -2.17
RFWD3Q6PCD5 MIR3684-201ENST00000579779 74 ntBASIC1.48□□□□□ -2.17
RFWD3Q6PCD5 snoU13.31-201ENST00000607291 104 ntBASIC1.48□□□□□ -2.17
RFWD3Q6PCD5 AL606534.2-204ENST00000635008 178 ntBASIC1.48□□□□□ -2.17
RFWD3Q6PCD5 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.48□□□□□ -2.17
RFWD3Q6PCD5 MTND4P29-201ENST00000503122 1372 ntBASIC1.47□□□□□ -2.17
RFWD3Q6PCD5 RNU6-1019P-201ENST00000364424 107 ntBASIC1.47□□□□□ -2.17
RFWD3Q6PCD5 Y_RNA.287-201ENST00000364853 94 ntBASIC1.47□□□□□ -2.17
RFWD3Q6PCD5 SNORA72.2-201ENST00000365028 127 ntBASIC1.47□□□□□ -2.17
RFWD3Q6PCD5 RNY1P14-201ENST00000384426 108 ntBASIC1.47□□□□□ -2.17
RFWD3Q6PCD5 RNU6-417P-201ENST00000384712 107 ntBASIC1.47□□□□□ -2.17
RFWD3Q6PCD5 RNA5SP475-201ENST00000410568 110 ntBASIC1.47□□□□□ -2.17
RFWD3Q6PCD5 RPL23AP36-201ENST00000413895 458 ntBASIC1.47□□□□□ -2.17
RFWD3Q6PCD5 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.47□□□□□ -2.17
RFWD3Q6PCD5 SNORA40.14-201ENST00000516543 86 ntBASIC1.47□□□□□ -2.17
RFWD3Q6PCD5 RNU6-1012P-201ENST00000516606 109 ntBASIC1.47□□□□□ -2.17
RFWD3Q6PCD5 AC023442.1-201ENST00000531247 422 ntBASIC1.47□□□□□ -2.17
RFWD3Q6PCD5 MIR4498-201ENST00000577599 66 ntBASIC1.47□□□□□ -2.17
RFWD3Q6PCD5 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.47□□□□□ -2.17
RFWD3Q6PCD5 AC022432.1-201ENST00000595739 310 ntBASIC1.47□□□□□ -2.17
RFWD3Q6PCD5 AC010900.2-201ENST00000604508 210 ntBASIC1.47□□□□□ -2.17
RFWD3Q6PCD5 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.47□□□□□ -2.17
RFWD3Q6PCD5 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.47□□□□□ -2.17
RFWD3Q6PCD5 MIR3674-201ENST00000636576 68 ntBASIC1.47□□□□□ -2.17
RFWD3Q6PCD5 WWP1P1-201ENST00000466609 2769 ntBASIC1.46□□□□□ -2.18
RFWD3Q6PCD5 RNU6-112P-201ENST00000363599 104 ntBASIC1.46□□□□□ -2.18
RFWD3Q6PCD5 RNU6-926P-201ENST00000384075 107 ntBASIC1.46□□□□□ -2.18
RFWD3Q6PCD5 RNU6-1310P-201ENST00000384153 107 ntBASIC1.46□□□□□ -2.18
RFWD3Q6PCD5 MRPL35P1-201ENST00000404272 572 ntBASIC1.46□□□□□ -2.18
RFWD3Q6PCD5 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.46□□□□□ -2.18
RFWD3Q6PCD5 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.46□□□□□ -2.18
RFWD3Q6PCD5 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.46□□□□□ -2.18
RFWD3Q6PCD5 AL160004.2-201ENST00000432935 350 ntBASIC1.46□□□□□ -2.18
RFWD3Q6PCD5 AC245047.4-201ENST00000433189 144 ntBASIC1.46□□□□□ -2.18
RFWD3Q6PCD5 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.46□□□□□ -2.18
RFWD3Q6PCD5 SNRPGP13-201ENST00000442212 177 ntBASIC1.46□□□□□ -2.18
RFWD3Q6PCD5 AC009474.2-201ENST00000451383 136 ntBASIC1.46□□□□□ -2.18
RFWD3Q6PCD5 SNORD65B-201ENST00000459126 73 ntBASIC1.46□□□□□ -2.18
RFWD3Q6PCD5 RPL26P26-201ENST00000480251 434 ntBASIC1.46□□□□□ -2.18
RFWD3Q6PCD5 AC010409.1-201ENST00000487382 476 ntBASIC1.46□□□□□ -2.18
RFWD3Q6PCD5 AC108729.3-201ENST00000513484 108 ntBASIC1.46□□□□□ -2.18
RFWD3Q6PCD5 RNU6-408P-201ENST00000515910 100 ntBASIC1.46□□□□□ -2.18
RFWD3Q6PCD5 AC024995.1-201ENST00000523014 93 ntBASIC1.46□□□□□ -2.18
RFWD3Q6PCD5 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.46□□□□□ -2.18
RFWD3Q6PCD5 AL137100.2-201ENST00000555786 315 ntBASIC1.46□□□□□ -2.18
RFWD3Q6PCD5 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.46□□□□□ -2.18
RFWD3Q6PCD5 SNORD58B-201ENST00000607313 66 ntBASIC1.46□□□□□ -2.18
RFWD3Q6PCD5 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.46□□□□□ -2.18
RFWD3Q6PCD5 AC006157.1-201ENST00000611750 366 ntBASIC1.46□□□□□ -2.18
RFWD3Q6PCD5 AC006435.5-201ENST00000624486 112 ntBASIC1.46□□□□□ -2.18
RFWD3Q6PCD5 U6.92-201ENST00000636464 89 ntBASIC1.46□□□□□ -2.18
RFWD3Q6PCD5 AC010615.1-201ENST00000594254 1764 ntBASIC1.46□□□□□ -2.18
RFWD3Q6PCD5 AP000648.3-201ENST00000623539 4507 ntBASIC1.46□□□□□ -2.18
RFWD3Q6PCD5 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
RFWD3Q6PCD5 RNU6-961P-201ENST00000363893 105 ntBASIC1.45□□□□□ -2.18
RFWD3Q6PCD5 Y_RNA.813-201ENST00000364639 102 ntBASIC1.45□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 231.6 ms