Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 AC022493.2-201ENST00000506122 481 ntBASIC1.42□□□□□ -2.18
CASC4Q6P4E1 AC097462.1-201ENST00000514125 324 ntBASIC1.42□□□□□ -2.18
CASC4Q6P4E1 MIR3124-201ENST00000582636 67 ntBASIC1.42□□□□□ -2.18
CASC4Q6P4E1 AL645939.4-201ENST00000604495 135 ntBASIC1.42□□□□□ -2.18
CASC4Q6P4E1 AL355073.2-201ENST00000612106 557 ntBASIC1.42□□□□□ -2.18
CASC4Q6P4E1 AC040896.1-201ENST00000613819 479 ntBASIC1.42□□□□□ -2.18
CASC4Q6P4E1 AC087588.2-201ENST00000617667 426 ntBASIC1.42□□□□□ -2.18
CASC4Q6P4E1 AL121890.5-201ENST00000620848 304 ntBASIC1.42□□□□□ -2.18
CASC4Q6P4E1 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.42□□□□□ -2.18
CASC4Q6P4E1 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.42□□□□□ -2.18
CASC4Q6P4E1 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
CASC4Q6P4E1 Y_RNA.577-201ENST00000384794 101 ntBASIC1.41□□□□□ -2.18
CASC4Q6P4E1 MTCO3P19-201ENST00000415864 321 ntBASIC1.41□□□□□ -2.18
CASC4Q6P4E1 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.41□□□□□ -2.18
CASC4Q6P4E1 AC114482.1-201ENST00000418010 247 ntBASIC1.41□□□□□ -2.18
CASC4Q6P4E1 RPL30P13-201ENST00000418873 348 ntBASIC1.41□□□□□ -2.18
CASC4Q6P4E1 RAB28P5-201ENST00000427490 651 ntBASIC1.41□□□□□ -2.18
CASC4Q6P4E1 AL135790.2-201ENST00000437701 267 ntBASIC1.41□□□□□ -2.18
CASC4Q6P4E1 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.41□□□□□ -2.18
CASC4Q6P4E1 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.41□□□□□ -2.18
CASC4Q6P4E1 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.41□□□□□ -2.18
CASC4Q6P4E1 SUB1P3-201ENST00000564581 315 ntBASIC1.41□□□□□ -2.18
CASC4Q6P4E1 MIR5690-201ENST00000583739 73 ntBASIC1.41□□□□□ -2.18
CASC4Q6P4E1 AC080078.3-201ENST00000605407 463 ntBASIC1.41□□□□□ -2.18
CASC4Q6P4E1 AL365434.2-201ENST00000607979 234 ntBASIC1.41□□□□□ -2.18
CASC4Q6P4E1 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.41□□□□□ -2.18
CASC4Q6P4E1 AC018630.2-201ENST00000534866 2403 ntBASIC1.41□□□□□ -2.18
CASC4Q6P4E1 U8.1-201ENST00000362843 134 ntBASIC1.4□□□□□ -2.19
CASC4Q6P4E1 RNU4-13P-201ENST00000364019 141 ntBASIC1.4□□□□□ -2.19
CASC4Q6P4E1 RNU6-454P-201ENST00000364292 107 ntBASIC1.4□□□□□ -2.19
CASC4Q6P4E1 MTCYBP4-201ENST00000401524 249 ntBASIC1.4□□□□□ -2.19
CASC4Q6P4E1 RNU6-1156P-201ENST00000410365 100 ntBASIC1.4□□□□□ -2.19
CASC4Q6P4E1 SNORD12B-201ENST00000410433 91 ntBASIC1.4□□□□□ -2.19
CASC4Q6P4E1 AC018865.2-201ENST00000423631 129 ntBASIC1.4□□□□□ -2.19
CASC4Q6P4E1 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC1.4□□□□□ -2.19
CASC4Q6P4E1 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.4□□□□□ -2.19
CASC4Q6P4E1 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC1.4□□□□□ -2.19
CASC4Q6P4E1 MTCO3P10-201ENST00000455912 772 ntBASIC1.4□□□□□ -2.19
CASC4Q6P4E1 RNU7-94P-201ENST00000459576 63 ntBASIC1.4□□□□□ -2.19
CASC4Q6P4E1 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC1.4□□□□□ -2.19
CASC4Q6P4E1 RNU6-559P-201ENST00000516151 98 ntBASIC1.4□□□□□ -2.19
CASC4Q6P4E1 RNU7-172P-201ENST00000517125 64 ntBASIC1.4□□□□□ -2.19
CASC4Q6P4E1 MIR3684-201ENST00000579779 74 ntBASIC1.4□□□□□ -2.19
CASC4Q6P4E1 AC113139.1-201ENST00000605049 239 ntBASIC1.4□□□□□ -2.19
CASC4Q6P4E1 AL078604.3-201ENST00000615580 211 ntBASIC1.4□□□□□ -2.19
CASC4Q6P4E1 U6.115-201ENST00000636045 103 ntBASIC1.4□□□□□ -2.19
CASC4Q6P4E1 MIR3674-201ENST00000636576 68 ntBASIC1.4□□□□□ -2.19
CASC4Q6P4E1 SNORA27.1-201ENST00000362604 124 ntBASIC1.39□□□□□ -2.19
CASC4Q6P4E1 RNU6-407P-201ENST00000365280 104 ntBASIC1.39□□□□□ -2.19
CASC4Q6P4E1 RNA5SP259-201ENST00000365541 109 ntBASIC1.39□□□□□ -2.19
CASC4Q6P4E1 SNORA69.1-201ENST00000390904 137 ntBASIC1.39□□□□□ -2.19
CASC4Q6P4E1 Y_RNA.592-201ENST00000410274 109 ntBASIC1.39□□□□□ -2.19
CASC4Q6P4E1 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.39□□□□□ -2.19
CASC4Q6P4E1 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.39□□□□□ -2.19
CASC4Q6P4E1 AC105758.1-201ENST00000506038 399 ntBASIC1.39□□□□□ -2.19
CASC4Q6P4E1 RNA5SP20-201ENST00000515976 84 ntBASIC1.39□□□□□ -2.19
CASC4Q6P4E1 RNU6-264P-201ENST00000517134 104 ntBASIC1.39□□□□□ -2.19
CASC4Q6P4E1 MIR2355-201ENST00000517199 87 ntBASIC1.39□□□□□ -2.19
CASC4Q6P4E1 SUMO2P16-201ENST00000519475 264 ntBASIC1.39□□□□□ -2.19
CASC4Q6P4E1 AL021879.1-201ENST00000611756 288 ntBASIC1.39□□□□□ -2.19
CASC4Q6P4E1 MIR6079-201ENST00000635807 62 ntBASIC1.39□□□□□ -2.19
CASC4Q6P4E1 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.39□□□□□ -2.19
CASC4Q6P4E1 SNORD26-201ENST00000384147 75 ntBASIC1.38□□□□□ -2.19
CASC4Q6P4E1 RNU6-1065P-201ENST00000384513 106 ntBASIC1.38□□□□□ -2.19
CASC4Q6P4E1 MIR625-201ENST00000385047 85 ntBASIC1.38□□□□□ -2.19
CASC4Q6P4E1 MTND4P28-201ENST00000426217 387 ntBASIC1.38□□□□□ -2.19
CASC4Q6P4E1 PGBD4P5-201ENST00000445958 426 ntBASIC1.38□□□□□ -2.19
CASC4Q6P4E1 RPL30P15-201ENST00000457129 321 ntBASIC1.38□□□□□ -2.19
CASC4Q6P4E1 RNU1-92P-201ENST00000517017 135 ntBASIC1.38□□□□□ -2.19
CASC4Q6P4E1 MIR26B-201ENST00000362251 77 ntBASIC1.37□□□□□ -2.19
CASC4Q6P4E1 MIR150-201ENST00000385048 84 ntBASIC1.37□□□□□ -2.19
CASC4Q6P4E1 AL034345.1-201ENST00000407768 123 ntBASIC1.37□□□□□ -2.19
CASC4Q6P4E1 RNA5SP475-201ENST00000410568 110 ntBASIC1.37□□□□□ -2.19
CASC4Q6P4E1 SNX2P2-201ENST00000424553 323 ntBASIC1.37□□□□□ -2.19
CASC4Q6P4E1 STAG3L5P-204ENST00000443759 179 ntBASIC1.37□□□□□ -2.19
CASC4Q6P4E1 Y_RNA.653-201ENST00000459091 95 ntBASIC1.37□□□□□ -2.19
CASC4Q6P4E1 RNU6-470P-201ENST00000515954 104 ntBASIC1.37□□□□□ -2.19
CASC4Q6P4E1 RNU6-237P-201ENST00000515985 71 ntBASIC1.37□□□□□ -2.19
CASC4Q6P4E1 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.37□□□□□ -2.19
CASC4Q6P4E1 AC008269.2-201ENST00000561915 1105 ntBASIC1.37□□□□□ -2.19
CASC4Q6P4E1 AC005828.6-201ENST00000606610 232 ntBASIC1.37□□□□□ -2.19
CASC4Q6P4E1 AL512598.1-201ENST00000610158 273 ntBASIC1.37□□□□□ -2.19
CASC4Q6P4E1 MIR7974-201ENST00000615835 79 ntBASIC1.37□□□□□ -2.19
CASC4Q6P4E1 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
CASC4Q6P4E1 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
CASC4Q6P4E1 Y_RNA.124-201ENST00000363339 93 ntBASIC1.36□□□□□ -2.19
CASC4Q6P4E1 Y_RNA.142-201ENST00000363491 102 ntBASIC1.36□□□□□ -2.19
CASC4Q6P4E1 RNY3P11-201ENST00000364153 102 ntBASIC1.36□□□□□ -2.19
CASC4Q6P4E1 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.36□□□□□ -2.19
CASC4Q6P4E1 MIR758-201ENST00000390227 88 ntBASIC1.36□□□□□ -2.19
CASC4Q6P4E1 MRPS18CP6-201ENST00000423587 223 ntBASIC1.36□□□□□ -2.19
CASC4Q6P4E1 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC1.36□□□□□ -2.19
CASC4Q6P4E1 AL137792.2-201ENST00000443484 235 ntBASIC1.36□□□□□ -2.19
CASC4Q6P4E1 AC091021.1-201ENST00000468051 388 ntBASIC1.36□□□□□ -2.19
CASC4Q6P4E1 RNU6-408P-201ENST00000515910 100 ntBASIC1.36□□□□□ -2.19
CASC4Q6P4E1 RNU6-277P-201ENST00000516272 106 ntBASIC1.36□□□□□ -2.19
CASC4Q6P4E1 AC005730.3-201ENST00000583067 366 ntBASIC1.36□□□□□ -2.19
CASC4Q6P4E1 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.36□□□□□ -2.19
CASC4Q6P4E1 MTND4LP32-201ENST00000636111 270 ntBASIC1.36□□□□□ -2.19
CASC4Q6P4E1 ZNF209P-201ENST00000593450 2304 ntBASIC1.35□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 116.4 ms