Protein–RNA interactions for Protein: Q494X3

ZNF404, Zinc finger protein 404, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF404Q494X3 AP002004.2-201ENST00000531656 154 ntBASIC0.52□□□□□ -2.33
ZNF404Q494X3 ZNF519P2-201ENST00000557032 169 ntBASIC0.52□□□□□ -2.33
ZNF404Q494X3 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC0.52□□□□□ -2.33
ZNF404Q494X3 AL117336.2-201ENST00000602435 335 ntBASIC0.52□□□□□ -2.33
ZNF404Q494X3 PRELID3BP2-201ENST00000605362 201 ntBASIC0.52□□□□□ -2.33
ZNF404Q494X3 AC104465.1-201ENST00000611365 139 ntBASIC0.52□□□□□ -2.33
ZNF404Q494X3 AC010999.1-201ENST00000611856 324 ntBASIC0.52□□□□□ -2.33
ZNF404Q494X3 AC022709.1-201ENST00000615967 87 ntBASIC0.52□□□□□ -2.33
ZNF404Q494X3 AC090582.1-201ENST00000636321 199 ntBASIC0.52□□□□□ -2.33
ZNF404Q494X3 AC068137.3-201ENST00000639191 341 ntBASIC0.52□□□□□ -2.33
ZNF404Q494X3 AL442644.1-201ENST00000454390 3105 ntBASIC0.51□□□□□ -2.33
ZNF404Q494X3 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.51□□□□□ -2.33
ZNF404Q494X3 SNORA1B-201ENST00000362535 133 ntBASIC0.51□□□□□ -2.33
ZNF404Q494X3 RNU4-12P-201ENST00000365233 139 ntBASIC0.51□□□□□ -2.33
ZNF404Q494X3 Y_RNA.354-201ENST00000365448 111 ntBASIC0.51□□□□□ -2.33
ZNF404Q494X3 Y_RNA.373-201ENST00000365600 103 ntBASIC0.51□□□□□ -2.33
ZNF404Q494X3 MIR10B-201ENST00000385011 110 ntBASIC0.51□□□□□ -2.33
ZNF404Q494X3 RNA5SP482-201ENST00000391269 118 ntBASIC0.51□□□□□ -2.33
ZNF404Q494X3 RNU6-1068P-201ENST00000410958 103 ntBASIC0.51□□□□□ -2.33
ZNF404Q494X3 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.51□□□□□ -2.33
ZNF404Q494X3 ELL2P3-201ENST00000457883 1602 ntBASIC0.51□□□□□ -2.33
ZNF404Q494X3 snoU13.18-201ENST00000459483 104 ntBASIC0.51□□□□□ -2.33
ZNF404Q494X3 AC107401.1-201ENST00000503426 685 ntBASIC0.51□□□□□ -2.33
ZNF404Q494X3 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.51□□□□□ -2.33
ZNF404Q494X3 MTND1P15-201ENST00000579262 949 ntBASIC0.51□□□□□ -2.33
ZNF404Q494X3 AL353765.1-201ENST00000605514 183 ntBASIC0.51□□□□□ -2.33
ZNF404Q494X3 AL391903.3-201ENST00000612158 163 ntBASIC0.51□□□□□ -2.33
ZNF404Q494X3 RNU1-133P-201ENST00000364867 167 ntBASIC0.5□□□□□ -2.33
ZNF404Q494X3 SNORA20B-201ENST00000384220 132 ntBASIC0.5□□□□□ -2.33
ZNF404Q494X3 RNU6-376P-201ENST00000384731 106 ntBASIC0.5□□□□□ -2.33
ZNF404Q494X3 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC0.5□□□□□ -2.33
ZNF404Q494X3 SEPT14P3-201ENST00000439401 183 ntBASIC0.5□□□□□ -2.33
ZNF404Q494X3 AL732372.2-207ENST00000445840 183 ntBASIC0.5□□□□□ -2.33
ZNF404Q494X3 AL157398.1-201ENST00000452981 186 ntBASIC0.5□□□□□ -2.33
ZNF404Q494X3 SEPT14P2-201ENST00000453405 183 ntBASIC0.5□□□□□ -2.33
ZNF404Q494X3 AC018710.1-201ENST00000506509 158 ntBASIC0.5□□□□□ -2.33
ZNF404Q494X3 SEPT14P4-201ENST00000513445 186 ntBASIC0.5□□□□□ -2.33
ZNF404Q494X3 Y_RNA.683-201ENST00000516508 93 ntBASIC0.5□□□□□ -2.33
ZNF404Q494X3 FO082796.1-201ENST00000523795 183 ntBASIC0.5□□□□□ -2.33
ZNF404Q494X3 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.5□□□□□ -2.33
ZNF404Q494X3 AC091178.2-201ENST00000584401 117 ntBASIC0.5□□□□□ -2.33
ZNF404Q494X3 AC019193.3-201ENST00000609144 554 ntBASIC0.5□□□□□ -2.33
ZNF404Q494X3 AL138726.1-201ENST00000614873 333 ntBASIC0.5□□□□□ -2.33
ZNF404Q494X3 DLEU2_5.1-201ENST00000615567 84 ntBASIC0.5□□□□□ -2.33
ZNF404Q494X3 AC078883.4-201ENST00000623218 367 ntBASIC0.5□□□□□ -2.33
ZNF404Q494X3 MIRLET7C-201ENST00000362160 84 ntBASIC0.49□□□□□ -2.33
ZNF404Q494X3 Y_RNA.77-201ENST00000362962 107 ntBASIC0.49□□□□□ -2.33
ZNF404Q494X3 RNU6-407P-201ENST00000365280 104 ntBASIC0.49□□□□□ -2.33
ZNF404Q494X3 RNU6-110P-201ENST00000384508 104 ntBASIC0.49□□□□□ -2.33
ZNF404Q494X3 DEFB108C-201ENST00000400154 252 ntBASIC0.49□□□□□ -2.33
ZNF404Q494X3 AL035398.1-201ENST00000430869 322 ntBASIC0.49□□□□□ -2.33
ZNF404Q494X3 MTATP6P13-201ENST00000438531 667 ntBASIC0.49□□□□□ -2.33
ZNF404Q494X3 COX6CP6-201ENST00000490840 228 ntBASIC0.49□□□□□ -2.33
ZNF404Q494X3 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC0.49□□□□□ -2.33
ZNF404Q494X3 RNU7-175P-201ENST00000515915 61 ntBASIC0.49□□□□□ -2.33
ZNF404Q494X3 RNU6-1291P-201ENST00000516591 104 ntBASIC0.49□□□□□ -2.33
ZNF404Q494X3 Y_RNA.693-201ENST00000516641 110 ntBASIC0.49□□□□□ -2.33
ZNF404Q494X3 OSBPL9P5-201ENST00000542581 171 ntBASIC0.49□□□□□ -2.33
ZNF404Q494X3 MIR5696-201ENST00000578474 85 ntBASIC0.49□□□□□ -2.33
ZNF404Q494X3 AC010525.2-201ENST00000590920 195 ntBASIC0.49□□□□□ -2.33
ZNF404Q494X3 AC124303.1-201ENST00000605703 360 ntBASIC0.49□□□□□ -2.33
ZNF404Q494X3 AC063944.3-201ENST00000609969 533 ntBASIC0.49□□□□□ -2.33
ZNF404Q494X3 AC023934.1-201ENST00000574529 2389 ntBASIC0.49□□□□□ -2.33
ZNF404Q494X3 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
ZNF404Q494X3 MTND5P26-201ENST00000426018 1752 ntBASIC0.48□□□□□ -2.33
ZNF404Q494X3 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
ZNF404Q494X3 RNU6-1042P-201ENST00000384204 107 ntBASIC0.48□□□□□ -2.33
ZNF404Q494X3 SNORD116-8-201ENST00000384365 95 ntBASIC0.48□□□□□ -2.33
ZNF404Q494X3 MIR526A1-201ENST00000384897 85 ntBASIC0.48□□□□□ -2.33
ZNF404Q494X3 MTCO3P40-201ENST00000392516 676 ntBASIC0.48□□□□□ -2.33
ZNF404Q494X3 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC0.48□□□□□ -2.33
ZNF404Q494X3 AC243428.1-201ENST00000421099 264 ntBASIC0.48□□□□□ -2.33
ZNF404Q494X3 AC018865.2-201ENST00000423631 129 ntBASIC0.48□□□□□ -2.33
ZNF404Q494X3 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.48□□□□□ -2.33
ZNF404Q494X3 RNA5SP20-201ENST00000515976 84 ntBASIC0.48□□□□□ -2.33
ZNF404Q494X3 AC022868.1-201ENST00000517767 391 ntBASIC0.48□□□□□ -2.33
ZNF404Q494X3 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC0.48□□□□□ -2.33
ZNF404Q494X3 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.48□□□□□ -2.33
ZNF404Q494X3 AL512360.1-201ENST00000555346 234 ntBASIC0.48□□□□□ -2.33
ZNF404Q494X3 AC012557.2-201ENST00000605919 418 ntBASIC0.48□□□□□ -2.33
ZNF404Q494X3 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.48□□□□□ -2.33
ZNF404Q494X3 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.48□□□□□ -2.33
ZNF404Q494X3 RNU6-1119P-201ENST00000384349 108 ntBASIC0.47□□□□□ -2.33
ZNF404Q494X3 MIR891A-201ENST00000401237 79 ntBASIC0.47□□□□□ -2.33
ZNF404Q494X3 Y_RNA.615-201ENST00000410769 117 ntBASIC0.47□□□□□ -2.33
ZNF404Q494X3 snoU13.25-201ENST00000458945 104 ntBASIC0.47□□□□□ -2.33
ZNF404Q494X3 RNU6-1278P-201ENST00000516130 107 ntBASIC0.47□□□□□ -2.33
ZNF404Q494X3 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.47□□□□□ -2.33
ZNF404Q494X3 MIR3684-201ENST00000579779 74 ntBASIC0.47□□□□□ -2.33
ZNF404Q494X3 AC092954.2-201ENST00000609103 430 ntBASIC0.47□□□□□ -2.33
ZNF404Q494X3 DISC2.1-201ENST00000612827 205 ntBASIC0.47□□□□□ -2.33
ZNF404Q494X3 AL359880.1-201ENST00000621879 266 ntBASIC0.47□□□□□ -2.33
ZNF404Q494X3 AC068700.1-201ENST00000565862 3754 ntBASIC0.46□□□□□ -2.34
ZNF404Q494X3 RNA5SP347-201ENST00000362445 119 ntBASIC0.46□□□□□ -2.34
ZNF404Q494X3 SNORA27.1-201ENST00000362604 124 ntBASIC0.46□□□□□ -2.34
ZNF404Q494X3 Y_RNA.330-201ENST00000365230 109 ntBASIC0.46□□□□□ -2.34
ZNF404Q494X3 Y_RNA.530-201ENST00000384587 101 ntBASIC0.46□□□□□ -2.34
ZNF404Q494X3 MTCYBP4-201ENST00000401524 249 ntBASIC0.46□□□□□ -2.34
ZNF404Q494X3 MTND3P23-201ENST00000431980 347 ntBASIC0.46□□□□□ -2.34
ZNF404Q494X3 AC233266.1-201ENST00000454518 96 ntBASIC0.46□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 151.2 ms