Protein–RNA interactions for Protein: Q3LFD5

USP41, Putative ubiquitin carboxyl-terminal hydrolase 41, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP41Q3LFD5 AC084768.2-201ENST00000622736 221 ntBASIC1.97□□□□□ -2.09
USP41Q3LFD5 ZNF702P-202ENST00000434269 1966 ntBASIC1.97□□□□□ -2.09
USP41Q3LFD5 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.96□□□□□ -2.09
USP41Q3LFD5 AC117470.1-201ENST00000381974 330 ntBASIC1.96□□□□□ -2.1
USP41Q3LFD5 RNU6-417P-201ENST00000384712 107 ntBASIC1.96□□□□□ -2.1
USP41Q3LFD5 RNA5SP489-201ENST00000410986 109 ntBASIC1.96□□□□□ -2.1
USP41Q3LFD5 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.96□□□□□ -2.1
USP41Q3LFD5 U8.20-201ENST00000459445 131 ntBASIC1.96□□□□□ -2.1
USP41Q3LFD5 RNVU1-2-201ENST00000516326 135 ntBASIC1.96□□□□□ -2.1
USP41Q3LFD5 AC027419.1-201ENST00000522976 328 ntBASIC1.96□□□□□ -2.1
USP41Q3LFD5 AP003072.1-201ENST00000531740 145 ntBASIC1.96□□□□□ -2.1
USP41Q3LFD5 AC055872.1-201ENST00000570978 278 ntBASIC1.96□□□□□ -2.1
USP41Q3LFD5 MIR3683-201ENST00000580847 82 ntBASIC1.96□□□□□ -2.1
USP41Q3LFD5 AC005176.2-201ENST00000596933 147 ntBASIC1.96□□□□□ -2.1
USP41Q3LFD5 AC004467.1-201ENST00000615678 330 ntBASIC1.96□□□□□ -2.1
USP41Q3LFD5 AC022513.1-201ENST00000624512 117 ntBASIC1.96□□□□□ -2.1
USP41Q3LFD5 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.96□□□□□ -2.1
USP41Q3LFD5 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
USP41Q3LFD5 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
USP41Q3LFD5 snoU2-30.2-201ENST00000362805 70 ntBASIC1.95□□□□□ -2.1
USP41Q3LFD5 Y_RNA.158-201ENST00000363651 101 ntBASIC1.95□□□□□ -2.1
USP41Q3LFD5 RNU1-96P-201ENST00000364163 162 ntBASIC1.95□□□□□ -2.1
USP41Q3LFD5 SNORA33.2-201ENST00000365413 134 ntBASIC1.95□□□□□ -2.1
USP41Q3LFD5 Y_RNA.527-201ENST00000384573 102 ntBASIC1.95□□□□□ -2.1
USP41Q3LFD5 RNU6-823P-201ENST00000391042 103 ntBASIC1.95□□□□□ -2.1
USP41Q3LFD5 RPEP5-201ENST00000441137 268 ntBASIC1.95□□□□□ -2.1
USP41Q3LFD5 RNU6-1146P-201ENST00000516282 102 ntBASIC1.95□□□□□ -2.1
USP41Q3LFD5 Y_RNA.721-201ENST00000517207 102 ntBASIC1.95□□□□□ -2.1
USP41Q3LFD5 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.95□□□□□ -2.1
USP41Q3LFD5 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.95□□□□□ -2.1
USP41Q3LFD5 MIR5094-201ENST00000578766 85 ntBASIC1.95□□□□□ -2.1
USP41Q3LFD5 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.95□□□□□ -2.1
USP41Q3LFD5 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC1.95□□□□□ -2.1
USP41Q3LFD5 AC091932.3-201ENST00000624223 323 ntBASIC1.95□□□□□ -2.1
USP41Q3LFD5 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
USP41Q3LFD5 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.94□□□□□ -2.1
USP41Q3LFD5 MIR410-201ENST00000362222 80 ntBASIC1.94□□□□□ -2.1
USP41Q3LFD5 SNORA63-201ENST00000363450 132 ntBASIC1.94□□□□□ -2.1
USP41Q3LFD5 RNU6-454P-201ENST00000364292 107 ntBASIC1.94□□□□□ -2.1
USP41Q3LFD5 RNA5SP190-201ENST00000365222 118 ntBASIC1.94□□□□□ -2.1
USP41Q3LFD5 Y_RNA.439-201ENST00000384119 94 ntBASIC1.94□□□□□ -2.1
USP41Q3LFD5 AL158823.1-201ENST00000418441 478 ntBASIC1.94□□□□□ -2.1
USP41Q3LFD5 AC099677.2-201ENST00000436385 175 ntBASIC1.94□□□□□ -2.1
USP41Q3LFD5 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.94□□□□□ -2.1
USP41Q3LFD5 RPL23AP3-201ENST00000453844 468 ntBASIC1.94□□□□□ -2.1
USP41Q3LFD5 SNORD65B-201ENST00000459126 73 ntBASIC1.94□□□□□ -2.1
USP41Q3LFD5 RNA5SP233-201ENST00000459153 113 ntBASIC1.94□□□□□ -2.1
USP41Q3LFD5 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.94□□□□□ -2.1
USP41Q3LFD5 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
USP41Q3LFD5 RNU6-397P-201ENST00000516226 104 ntBASIC1.94□□□□□ -2.1
USP41Q3LFD5 AC022616.4-201ENST00000522985 181 ntBASIC1.94□□□□□ -2.1
USP41Q3LFD5 MIR4287-201ENST00000579398 78 ntBASIC1.94□□□□□ -2.1
USP41Q3LFD5 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.94□□□□□ -2.1
USP41Q3LFD5 AC010205.1-201ENST00000616668 449 ntBASIC1.94□□□□□ -2.1
USP41Q3LFD5 U1.36-201ENST00000620684 176 ntBASIC1.94□□□□□ -2.1
USP41Q3LFD5 SDR42E1P4-201ENST00000620894 481 ntBASIC1.94□□□□□ -2.1
USP41Q3LFD5 MIR338-201ENST00000636369 67 ntBASIC1.94□□□□□ -2.1
USP41Q3LFD5 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.94□□□□□ -2.1
USP41Q3LFD5 Y_RNA.287-201ENST00000364853 94 ntBASIC1.93□□□□□ -2.1
USP41Q3LFD5 RNU6-639P-201ENST00000384074 107 ntBASIC1.93□□□□□ -2.1
USP41Q3LFD5 SNORA48.1-201ENST00000390879 135 ntBASIC1.93□□□□□ -2.1
USP41Q3LFD5 AL627390.1-201ENST00000396055 340 ntBASIC1.93□□□□□ -2.1
USP41Q3LFD5 AL117342.1-201ENST00000404861 406 ntBASIC1.93□□□□□ -2.1
USP41Q3LFD5 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.93□□□□□ -2.1
USP41Q3LFD5 RNA5SP57-201ENST00000459463 123 ntBASIC1.93□□□□□ -2.1
USP41Q3LFD5 RPS29P11-201ENST00000496507 171 ntBASIC1.93□□□□□ -2.1
USP41Q3LFD5 RNU6-250P-201ENST00000516958 103 ntBASIC1.93□□□□□ -2.1
USP41Q3LFD5 Y_RNA.715-201ENST00000517082 110 ntBASIC1.93□□□□□ -2.1
USP41Q3LFD5 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.93□□□□□ -2.1
USP41Q3LFD5 MIR4680-201ENST00000580906 66 ntBASIC1.93□□□□□ -2.1
USP41Q3LFD5 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.93□□□□□ -2.1
USP41Q3LFD5 AL021879.1-201ENST00000611756 288 ntBASIC1.93□□□□□ -2.1
USP41Q3LFD5 PART1_1.1-201ENST00000611761 217 ntBASIC1.93□□□□□ -2.1
USP41Q3LFD5 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
USP41Q3LFD5 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
USP41Q3LFD5 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.93□□□□□ -2.1
USP41Q3LFD5 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
USP41Q3LFD5 Y_RNA.143-201ENST00000363520 106 ntBASIC1.92□□□□□ -2.1
USP41Q3LFD5 Y_RNA.551-201ENST00000384661 102 ntBASIC1.92□□□□□ -2.1
USP41Q3LFD5 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.92□□□□□ -2.1
USP41Q3LFD5 AC108667.1-201ENST00000428618 249 ntBASIC1.92□□□□□ -2.1
USP41Q3LFD5 AC005002.2-201ENST00000438228 269 ntBASIC1.92□□□□□ -2.1
USP41Q3LFD5 RNU6-1137P-201ENST00000517073 99 ntBASIC1.92□□□□□ -2.1
USP41Q3LFD5 AC005034.5-201ENST00000604219 466 ntBASIC1.92□□□□□ -2.1
USP41Q3LFD5 AL353149.1-201ENST00000610667 244 ntBASIC1.92□□□□□ -2.1
USP41Q3LFD5 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.92□□□□□ -2.1
USP41Q3LFD5 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.92□□□□□ -2.1
USP41Q3LFD5 Y_RNA.101-201ENST00000363154 102 ntBASIC1.91□□□□□ -2.1
USP41Q3LFD5 Y_RNA.326-201ENST00000365176 113 ntBASIC1.91□□□□□ -2.1
USP41Q3LFD5 SNORA20B-201ENST00000384220 132 ntBASIC1.91□□□□□ -2.1
USP41Q3LFD5 Y_RNA.455-201ENST00000384230 98 ntBASIC1.91□□□□□ -2.1
USP41Q3LFD5 RNA5SP467-201ENST00000391274 118 ntBASIC1.91□□□□□ -2.1
USP41Q3LFD5 MIR1252-201ENST00000408861 65 ntBASIC1.91□□□□□ -2.1
USP41Q3LFD5 RNU6-130P-201ENST00000411112 103 ntBASIC1.91□□□□□ -2.1
USP41Q3LFD5 HMGN2P19-201ENST00000425149 265 ntBASIC1.91□□□□□ -2.1
USP41Q3LFD5 CST2P1-201ENST00000425770 87 ntBASIC1.91□□□□□ -2.1
USP41Q3LFD5 SNORD13-201ENST00000459299 104 ntBASIC1.91□□□□□ -2.1
USP41Q3LFD5 AC010598.1-201ENST00000510378 103 ntBASIC1.91□□□□□ -2.1
USP41Q3LFD5 Y_RNA.713-201ENST00000517013 96 ntBASIC1.91□□□□□ -2.1
USP41Q3LFD5 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms