Protein–RNA interactions for Protein: Q08722

CD47, Leukocyte surface antigen CD47, humanhuman

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD47Q08722 SNORD116.3-201ENST00000517176 78 ntBASIC1.34□□□□□ -2.19
CD47Q08722 AC006600.1-201ENST00000572529 153 ntBASIC1.34□□□□□ -2.19
CD47Q08722 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.34□□□□□ -2.19
CD47Q08722 AC092447.9-201ENST00000603395 144 ntBASIC1.34□□□□□ -2.19
CD47Q08722 AL080274.1-201ENST00000605565 220 ntBASIC1.34□□□□□ -2.19
CD47Q08722 SNORD58B-201ENST00000607313 66 ntBASIC1.34□□□□□ -2.19
CD47Q08722 U6.92-201ENST00000636464 89 ntBASIC1.34□□□□□ -2.19
CD47Q08722 Y_RNA.31-201ENST00000362574 102 ntBASIC1.33□□□□□ -2.2
CD47Q08722 Y_RNA.813-201ENST00000364639 102 ntBASIC1.33□□□□□ -2.2
CD47Q08722 RNY1P14-201ENST00000384426 108 ntBASIC1.33□□□□□ -2.2
CD47Q08722 RNY3P4-201ENST00000384428 101 ntBASIC1.33□□□□□ -2.2
CD47Q08722 CEP57L1P1-201ENST00000430943 1201 ntBASIC1.33□□□□□ -2.2
CD47Q08722 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.33□□□□□ -2.2
CD47Q08722 RPS29P23-201ENST00000458635 123 ntBASIC1.33□□□□□ -2.2
CD47Q08722 RNU6-1146P-201ENST00000516282 102 ntBASIC1.33□□□□□ -2.2
CD47Q08722 RNU6-1012P-201ENST00000516606 109 ntBASIC1.33□□□□□ -2.2
CD47Q08722 MIR2355-201ENST00000517199 87 ntBASIC1.33□□□□□ -2.2
CD47Q08722 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.33□□□□□ -2.2
CD47Q08722 AC022217.4-201ENST00000604389 163 ntBASIC1.33□□□□□ -2.2
CD47Q08722 AC007485.1-201ENST00000616755 206 ntBASIC1.33□□□□□ -2.2
CD47Q08722 U6.73-201ENST00000619194 103 ntBASIC1.33□□□□□ -2.2
CD47Q08722 uc_338.22-201ENST00000622722 187 ntBASIC1.33□□□□□ -2.2
CD47Q08722 U6.115-201ENST00000636045 103 ntBASIC1.33□□□□□ -2.2
CD47Q08722 MIR3674-201ENST00000636576 68 ntBASIC1.33□□□□□ -2.2
CD47Q08722 MIR410-201ENST00000362222 80 ntBASIC1.32□□□□□ -2.2
CD47Q08722 Y_RNA.101-201ENST00000363154 102 ntBASIC1.32□□□□□ -2.2
CD47Q08722 Y_RNA.124-201ENST00000363339 93 ntBASIC1.32□□□□□ -2.2
CD47Q08722 Y_RNA.197-201ENST00000364004 102 ntBASIC1.32□□□□□ -2.2
CD47Q08722 Y_RNA.252-201ENST00000364556 101 ntBASIC1.32□□□□□ -2.2
CD47Q08722 SNORD42.2-201ENST00000365570 69 ntBASIC1.32□□□□□ -2.2
CD47Q08722 RNU2-7P-201ENST00000410794 178 ntBASIC1.32□□□□□ -2.2
CD47Q08722 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.32□□□□□ -2.2
CD47Q08722 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.32□□□□□ -2.2
CD47Q08722 AL354695.1-201ENST00000427935 228 ntBASIC1.32□□□□□ -2.2
CD47Q08722 AL137792.2-201ENST00000443484 235 ntBASIC1.32□□□□□ -2.2
CD47Q08722 CYCSP23-201ENST00000519781 313 ntBASIC1.32□□□□□ -2.2
CD47Q08722 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.32□□□□□ -2.2
CD47Q08722 AC023442.1-201ENST00000531247 422 ntBASIC1.32□□□□□ -2.2
CD47Q08722 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.32□□□□□ -2.2
CD47Q08722 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.32□□□□□ -2.2
CD47Q08722 AC015720.1-201ENST00000565251 277 ntBASIC1.32□□□□□ -2.2
CD47Q08722 MIR4659A-201ENST00000580269 81 ntBASIC1.32□□□□□ -2.2
CD47Q08722 MIR5188-201ENST00000583467 113 ntBASIC1.32□□□□□ -2.2
CD47Q08722 AC022432.1-201ENST00000595739 310 ntBASIC1.32□□□□□ -2.2
CD47Q08722 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.32□□□□□ -2.2
CD47Q08722 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
CD47Q08722 MIR424-201ENST00000362227 98 ntBASIC1.31□□□□□ -2.2
CD47Q08722 MIR126-201ENST00000362291 85 ntBASIC1.31□□□□□ -2.2
CD47Q08722 Y_RNA.61-201ENST00000362835 102 ntBASIC1.31□□□□□ -2.2
CD47Q08722 RNU6-203P-201ENST00000384038 104 ntBASIC1.31□□□□□ -2.2
CD47Q08722 RNA5SP323-201ENST00000391094 133 ntBASIC1.31□□□□□ -2.2
CD47Q08722 EBAG9P1-201ENST00000418955 543 ntBASIC1.31□□□□□ -2.2
CD47Q08722 AC010154.1-201ENST00000425857 269 ntBASIC1.31□□□□□ -2.2
CD47Q08722 MTND1P14-201ENST00000427400 950 ntBASIC1.31□□□□□ -2.2
CD47Q08722 HSPE1P24-201ENST00000450782 238 ntBASIC1.31□□□□□ -2.2
CD47Q08722 RPS26P45-201ENST00000471748 340 ntBASIC1.31□□□□□ -2.2
CD47Q08722 RPS27P22-201ENST00000478056 241 ntBASIC1.31□□□□□ -2.2
CD47Q08722 SNORA31.10-201ENST00000516482 106 ntBASIC1.31□□□□□ -2.2
CD47Q08722 SNORA31.24-201ENST00000517232 57 ntBASIC1.31□□□□□ -2.2
CD47Q08722 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
CD47Q08722 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.31□□□□□ -2.2
CD47Q08722 MIR4438-201ENST00000585271 93 ntBASIC1.31□□□□□ -2.2
CD47Q08722 VN1R91P-201ENST00000594377 169 ntBASIC1.31□□□□□ -2.2
CD47Q08722 AC004467.1-201ENST00000615678 330 ntBASIC1.31□□□□□ -2.2
CD47Q08722 RNU6-661P-201ENST00000362409 107 ntBASIC1.3□□□□□ -2.2
CD47Q08722 RNU6-1266P-201ENST00000362794 105 ntBASIC1.3□□□□□ -2.2
CD47Q08722 RNU6-20P-201ENST00000384106 107 ntBASIC1.3□□□□□ -2.2
CD47Q08722 MIR628-201ENST00000385229 95 ntBASIC1.3□□□□□ -2.2
CD47Q08722 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
CD47Q08722 SNORA12.1-201ENST00000390873 148 ntBASIC1.3□□□□□ -2.2
CD47Q08722 RPL21P1-201ENST00000399532 476 ntBASIC1.3□□□□□ -2.2
CD47Q08722 RNA5SP475-201ENST00000410568 110 ntBASIC1.3□□□□□ -2.2
CD47Q08722 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.3□□□□□ -2.2
CD47Q08722 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.3□□□□□ -2.2
CD47Q08722 MRPS10P1-201ENST00000448483 130 ntBASIC1.3□□□□□ -2.2
CD47Q08722 AC010598.1-201ENST00000510378 103 ntBASIC1.3□□□□□ -2.2
CD47Q08722 RNU6-976P-201ENST00000516086 111 ntBASIC1.3□□□□□ -2.2
CD47Q08722 RNU6-911P-201ENST00000516523 104 ntBASIC1.3□□□□□ -2.2
CD47Q08722 RNU1-142P-201ENST00000516682 145 ntBASIC1.3□□□□□ -2.2
CD47Q08722 SNORA44.1-201ENST00000517031 108 ntBASIC1.3□□□□□ -2.2
CD47Q08722 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.3□□□□□ -2.2
CD47Q08722 AL137100.2-201ENST00000555786 315 ntBASIC1.3□□□□□ -2.2
CD47Q08722 SNORA77B-201ENST00000578179 125 ntBASIC1.3□□□□□ -2.2
CD47Q08722 AC006157.1-201ENST00000611750 366 ntBASIC1.3□□□□□ -2.2
CD47Q08722 AL359075.3-201ENST00000613288 217 ntBASIC1.3□□□□□ -2.2
CD47Q08722 AC240442.1-201ENST00000616055 283 ntBASIC1.3□□□□□ -2.2
CD47Q08722 AC091812.1-201ENST00000432235 1948 ntBASIC1.29□□□□□ -2.2
CD47Q08722 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.29□□□□□ -2.2
CD47Q08722 Y_RNA.27-201ENST00000362540 103 ntBASIC1.29□□□□□ -2.2
CD47Q08722 SNORA27.1-201ENST00000362604 124 ntBASIC1.29□□□□□ -2.2
CD47Q08722 Y_RNA.112-201ENST00000363250 102 ntBASIC1.29□□□□□ -2.2
CD47Q08722 RNU6-626P-201ENST00000363354 107 ntBASIC1.29□□□□□ -2.2
CD47Q08722 RNU6-60P-201ENST00000364792 103 ntBASIC1.29□□□□□ -2.2
CD47Q08722 RNU6-407P-201ENST00000365280 104 ntBASIC1.29□□□□□ -2.2
CD47Q08722 Y_RNA.395-201ENST00000383945 109 ntBASIC1.29□□□□□ -2.2
CD47Q08722 RNU6-474P-201ENST00000384243 107 ntBASIC1.29□□□□□ -2.2
CD47Q08722 Y_RNA.535-201ENST00000384612 99 ntBASIC1.29□□□□□ -2.2
CD47Q08722 SNORD78.2-201ENST00000391076 69 ntBASIC1.29□□□□□ -2.2
CD47Q08722 AC022028.1-201ENST00000412054 408 ntBASIC1.29□□□□□ -2.2
CD47Q08722 PMCHL1-202ENST00000423102 261 ntBASIC1.29□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 147.4 ms