Protein–RNA interactions for Protein: Q07654

TFF3, Trefoil factor 3, humanhuman

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3Q07654 RNU6-1315P-201ENST00000517187 99 ntBASIC-1.97□□□□□ -2.72
TFF3Q07654 AL355375.2-201ENST00000574825 175 ntBASIC-1.97□□□□□ -2.72
TFF3Q07654 MIR4753-201ENST00000585119 83 ntBASIC-1.97□□□□□ -2.72
TFF3Q07654 AL158042.1-201ENST00000605338 460 ntBASIC-1.97□□□□□ -2.72
TFF3Q07654 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC-1.97□□□□□ -2.72
TFF3Q07654 AC004223.4-201ENST00000612426 332 ntBASIC-1.97□□□□□ -2.72
TFF3Q07654 MIR6129-201ENST00000616087 109 ntBASIC-1.97□□□□□ -2.72
TFF3Q07654 AC112204.3-201ENST00000623822 332 ntBASIC-1.97□□□□□ -2.72
TFF3Q07654 MIR452-201ENST00000385020 85 ntBASIC-1.98□□□□□ -2.73
TFF3Q07654 MIR16-1-201ENST00000385271 89 ntBASIC-1.98□□□□□ -2.73
TFF3Q07654 AC243428.1-201ENST00000421099 264 ntBASIC-1.98□□□□□ -2.73
TFF3Q07654 MTCO2P5-201ENST00000422621 426 ntBASIC-1.98□□□□□ -2.73
TFF3Q07654 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC-1.98□□□□□ -2.73
TFF3Q07654 RNU7-156P-201ENST00000517214 74 ntBASIC-1.98□□□□□ -2.73
TFF3Q07654 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC-1.98□□□□□ -2.73
TFF3Q07654 MIR4770-201ENST00000579149 58 ntBASIC-1.98□□□□□ -2.73
TFF3Q07654 AC011458.1-201ENST00000604034 617 ntBASIC-1.98□□□□□ -2.73
TFF3Q07654 AL359999.1-201ENST00000604513 294 ntBASIC-1.98□□□□□ -2.73
TFF3Q07654 AP000942.4-201ENST00000604811 241 ntBASIC-1.98□□□□□ -2.73
TFF3Q07654 AC009994.1-201ENST00000606889 253 ntBASIC-1.98□□□□□ -2.73
TFF3Q07654 AC124016.2-201ENST00000610058 665 ntBASIC-1.98□□□□□ -2.73
TFF3Q07654 AL596211.1-201ENST00000569873 2277 ntBASIC-1.99□□□□□ -2.73
TFF3Q07654 Y_RNA.1-201ENST00000352915 104 ntBASIC-1.99□□□□□ -2.73
TFF3Q07654 RNU6-28P-201ENST00000362378 107 ntBASIC-1.99□□□□□ -2.73
TFF3Q07654 AL359634.1-202ENST00000404721 284 ntBASIC-1.99□□□□□ -2.73
TFF3Q07654 SSR1P2-201ENST00000415208 787 ntBASIC-1.99□□□□□ -2.73
TFF3Q07654 ZNF736P7Y-201ENST00000425158 820 ntBASIC-1.99□□□□□ -2.73
TFF3Q07654 RNU6-287P-201ENST00000516230 98 ntBASIC-1.99□□□□□ -2.73
TFF3Q07654 RNU7-99P-201ENST00000516271 62 ntBASIC-1.99□□□□□ -2.73
TFF3Q07654 AP001033.2-201ENST00000609701 1003 ntBASIC-1.99□□□□□ -2.73
TFF3Q07654 MIR6851-201ENST00000617060 67 ntBASIC-1.99□□□□□ -2.73
TFF3Q07654 Y_RNA.117-201ENST00000363294 101 ntBASIC-2□□□□□ -2.73
TFF3Q07654 Y_RNA.125-201ENST00000363371 111 ntBASIC-2□□□□□ -2.73
TFF3Q07654 RNU6-1066P-201ENST00000363573 105 ntBASIC-2□□□□□ -2.73
TFF3Q07654 RNU6-1244P-201ENST00000363614 108 ntBASIC-2□□□□□ -2.73
TFF3Q07654 RNU6-721P-201ENST00000410155 105 ntBASIC-2□□□□□ -2.73
TFF3Q07654 RNU6-1199P-201ENST00000411249 104 ntBASIC-2□□□□□ -2.73
TFF3Q07654 AC098592.1-201ENST00000419352 333 ntBASIC-2□□□□□ -2.73
TFF3Q07654 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC-2□□□□□ -2.73
TFF3Q07654 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC-2□□□□□ -2.73
TFF3Q07654 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC-2□□□□□ -2.73
TFF3Q07654 snoU13.16-201ENST00000459350 104 ntBASIC-2□□□□□ -2.73
TFF3Q07654 AC112206.4-201ENST00000515142 405 ntBASIC-2□□□□□ -2.73
TFF3Q07654 RNU6-983P-201ENST00000516004 103 ntBASIC-2□□□□□ -2.73
TFF3Q07654 RNU6-714P-201ENST00000516963 103 ntBASIC-2□□□□□ -2.73
TFF3Q07654 AP001189.2-201ENST00000527320 189 ntBASIC-2□□□□□ -2.73
TFF3Q07654 AC104073.3-201ENST00000610942 955 ntBASIC-2□□□□□ -2.73
TFF3Q07654 AC105081.1-201ENST00000617727 106 ntBASIC-2□□□□□ -2.73
TFF3Q07654 RNY4P7-201ENST00000364600 96 ntBASIC-2.01□□□□□ -2.73
TFF3Q07654 SNORA22B-201ENST00000383876 138 ntBASIC-2.01□□□□□ -2.73
TFF3Q07654 MIR525-201ENST00000384978 85 ntBASIC-2.01□□□□□ -2.73
TFF3Q07654 MIR15B-201ENST00000385045 98 ntBASIC-2.01□□□□□ -2.73
TFF3Q07654 MIR549A-201ENST00000385268 96 ntBASIC-2.01□□□□□ -2.73
TFF3Q07654 TMSB4XP6-201ENST00000415187 135 ntBASIC-2.01□□□□□ -2.73
TFF3Q07654 XACT-201ENST00000468762 497 ntTSL 5 BASIC-2.01□□□□□ -2.73
TFF3Q07654 RPL23AP75-201ENST00000491601 451 ntBASIC-2.01□□□□□ -2.73
TFF3Q07654 AL512347.1-201ENST00000566420 503 ntBASIC-2.01□□□□□ -2.73
TFF3Q07654 MIR3923-201ENST00000579521 83 ntBASIC-2.01□□□□□ -2.73
TFF3Q07654 MIR4264-201ENST00000583520 66 ntBASIC-2.01□□□□□ -2.73
TFF3Q07654 Z99497.2-201ENST00000603634 310 ntBASIC-2.01□□□□□ -2.73
TFF3Q07654 AP000753.3-201ENST00000604083 169 ntBASIC-2.01□□□□□ -2.73
TFF3Q07654 CDR1-202ENST00000625883 1485 ntBASIC-2.01□□□□□ -2.73
TFF3Q07654 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC-2.02□□□□□ -2.73
TFF3Q07654 Y_RNA.33-201ENST00000362591 102 ntBASIC-2.02□□□□□ -2.73
TFF3Q07654 Y_RNA.174-201ENST00000363781 105 ntBASIC-2.02□□□□□ -2.73
TFF3Q07654 Y_RNA.365-201ENST00000365537 102 ntBASIC-2.02□□□□□ -2.73
TFF3Q07654 RNU6-167P-201ENST00000384292 106 ntBASIC-2.02□□□□□ -2.73
TFF3Q07654 Y_RNA.534-201ENST00000384599 112 ntBASIC-2.02□□□□□ -2.73
TFF3Q07654 RNU6-455P-201ENST00000384681 107 ntBASIC-2.02□□□□□ -2.73
TFF3Q07654 RNU6-817P-201ENST00000391083 104 ntBASIC-2.02□□□□□ -2.73
TFF3Q07654 Y_RNA.623-201ENST00000411128 95 ntBASIC-2.02□□□□□ -2.73
TFF3Q07654 CALM2P2-201ENST00000428512 440 ntBASIC-2.02□□□□□ -2.73
TFF3Q07654 RNU6-123P-201ENST00000516163 102 ntBASIC-2.02□□□□□ -2.73
TFF3Q07654 RNA5SP135-201ENST00000517019 125 ntBASIC-2.02□□□□□ -2.73
TFF3Q07654 MRPS18CP4-201ENST00000535821 231 ntBASIC-2.02□□□□□ -2.73
TFF3Q07654 MIR1273C-201ENST00000578669 77 ntBASIC-2.02□□□□□ -2.73
TFF3Q07654 Y_RNA.225-201ENST00000364326 97 ntBASIC-2.03□□□□□ -2.73
TFF3Q07654 RNU6-1336P-201ENST00000383886 109 ntBASIC-2.03□□□□□ -2.73
TFF3Q07654 UBE2V1P11-201ENST00000411559 285 ntBASIC-2.03□□□□□ -2.73
TFF3Q07654 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC-2.03□□□□□ -2.73
TFF3Q07654 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC-2.03□□□□□ -2.73
TFF3Q07654 NDUFB1P2-201ENST00000449477 176 ntBASIC-2.03□□□□□ -2.73
TFF3Q07654 AC010486.3-201ENST00000511602 785 ntBASIC-2.03□□□□□ -2.73
TFF3Q07654 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC-2.03□□□□□ -2.73
TFF3Q07654 MIR4280-201ENST00000582178 76 ntBASIC-2.03□□□□□ -2.73
TFF3Q07654 AC027279.3-201ENST00000625055 122 ntBASIC-2.03□□□□□ -2.73
TFF3Q07654 RNU6-562P-201ENST00000362731 107 ntBASIC-2.04□□□□□ -2.74
TFF3Q07654 RNU6-873P-201ENST00000363833 107 ntBASIC-2.04□□□□□ -2.74
TFF3Q07654 RNU6-395P-201ENST00000365662 106 ntBASIC-2.04□□□□□ -2.74
TFF3Q07654 MIR544A-201ENST00000384855 91 ntBASIC-2.04□□□□□ -2.74
TFF3Q07654 AC114491.1-201ENST00000416095 246 ntBASIC-2.04□□□□□ -2.74
TFF3Q07654 AC079781.2-201ENST00000446424 169 ntBASIC-2.04□□□□□ -2.74
TFF3Q07654 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC-2.04□□□□□ -2.74
TFF3Q07654 SNORD116-30-201ENST00000516468 85 ntBASIC-2.04□□□□□ -2.74
TFF3Q07654 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC-2.04□□□□□ -2.74
TFF3Q07654 AC005592.1-201ENST00000566527 1640 ntBASIC-2.04□□□□□ -2.74
TFF3Q07654 AC091946.2-201ENST00000606105 291 ntBASIC-2.04□□□□□ -2.74
TFF3Q07654 AC010205.1-201ENST00000616668 449 ntBASIC-2.04□□□□□ -2.74
TFF3Q07654 AL445584.3-201ENST00000617173 78 ntBASIC-2.04□□□□□ -2.74
TFF3Q07654 Y_RNA.263-201ENST00000364659 114 ntBASIC-2.05□□□□□ -2.74
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms