Protein–RNA interactions for Protein: Q00341

HDLBP, Vigilin, humanhuman

Known RBP Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBPQ00341 AC073349.3-201ENST00000617616 186 ntBASIC3.17□□□□□ -1.9
HDLBPQ00341 U2.3-201ENST00000617785 191 ntBASIC3.17□□□□□ -1.9
HDLBPQ00341 U2.19-201ENST00000618602 191 ntBASIC3.17□□□□□ -1.9
HDLBPQ00341 RNU2-1-201ENST00000618664 191 ntBASIC3.17□□□□□ -1.9
HDLBPQ00341 U2.6-201ENST00000619225 191 ntBASIC3.17□□□□□ -1.9
HDLBPQ00341 U2.5-201ENST00000619465 191 ntBASIC3.17□□□□□ -1.9
HDLBPQ00341 U2.10-201ENST00000620268 191 ntBASIC3.17□□□□□ -1.9
HDLBPQ00341 AC108206.1-201ENST00000570186 4159 ntBASIC3.17□□□□□ -1.9
HDLBPQ00341 AC131280.1-202ENST00000624067 4211 ntBASIC3.16□□□□□ -1.9
HDLBPQ00341 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC3.16□□□□□ -1.9
HDLBPQ00341 RNU6-1272P-201ENST00000362776 107 ntBASIC3.16□□□□□ -1.9
HDLBPQ00341 snoU2-30.2-201ENST00000362805 70 ntBASIC3.16□□□□□ -1.9
HDLBPQ00341 Y_RNA.287-201ENST00000364853 94 ntBASIC3.16□□□□□ -1.9
HDLBPQ00341 MIR515-2-201ENST00000384883 83 ntBASIC3.16□□□□□ -1.9
HDLBPQ00341 MIR515-1-201ENST00000384884 83 ntBASIC3.16□□□□□ -1.9
HDLBPQ00341 AC060773.1-201ENST00000421698 310 ntBASIC3.16□□□□□ -1.9
HDLBPQ00341 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC3.16□□□□□ -1.9
HDLBPQ00341 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC3.16□□□□□ -1.9
HDLBPQ00341 ATP5J2P3-201ENST00000451550 258 ntBASIC3.16□□□□□ -1.9
HDLBPQ00341 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC3.16□□□□□ -1.9
HDLBPQ00341 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC3.16□□□□□ -1.9
HDLBPQ00341 RNU1-41P-201ENST00000516161 162 ntBASIC3.16□□□□□ -1.9
HDLBPQ00341 RNU1-48P-201ENST00000516400 162 ntBASIC3.16□□□□□ -1.9
HDLBPQ00341 AP005660.1-201ENST00000522972 293 ntBASIC3.16□□□□□ -1.9
HDLBPQ00341 AC027419.1-201ENST00000522976 328 ntBASIC3.16□□□□□ -1.9
HDLBPQ00341 MIR4282-201ENST00000583613 67 ntBASIC3.16□□□□□ -1.9
HDLBPQ00341 MIR4658-201ENST00000584344 65 ntBASIC3.16□□□□□ -1.9
HDLBPQ00341 AL031274.2-201ENST00000599419 203 ntBASIC3.16□□□□□ -1.9
HDLBPQ00341 RNU6-23P-201ENST00000363283 107 ntBASIC3.15□□□□□ -1.91
HDLBPQ00341 Y_RNA.122-201ENST00000363331 96 ntBASIC3.15□□□□□ -1.91
HDLBPQ00341 Y_RNA.269-201ENST00000364685 89 ntBASIC3.15□□□□□ -1.91
HDLBPQ00341 MIR181A2-201ENST00000384863 110 ntBASIC3.15□□□□□ -1.91
HDLBPQ00341 RPL36AP21-201ENST00000490372 323 ntBASIC3.15□□□□□ -1.91
HDLBPQ00341 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC3.15□□□□□ -1.91
HDLBPQ00341 RPS29P21-201ENST00000496272 170 ntBASIC3.15□□□□□ -1.91
HDLBPQ00341 TRAPPC2P7-201ENST00000509650 231 ntBASIC3.15□□□□□ -1.91
HDLBPQ00341 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC3.15□□□□□ -1.91
HDLBPQ00341 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC3.15□□□□□ -1.91
HDLBPQ00341 MIR4438-201ENST00000585271 93 ntBASIC3.15□□□□□ -1.91
HDLBPQ00341 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.15□□□□□ -1.91
HDLBPQ00341 AL442067.1-201ENST00000613261 223 ntBASIC3.15□□□□□ -1.91
HDLBPQ00341 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
HDLBPQ00341 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC3.14□□□□□ -1.91
HDLBPQ00341 MIR27B-201ENST00000385129 97 ntBASIC3.14□□□□□ -1.91
HDLBPQ00341 AL590004.2-201ENST00000404787 371 ntBASIC3.14□□□□□ -1.91
HDLBPQ00341 SNORD2.1-201ENST00000458762 69 ntBASIC3.14□□□□□ -1.91
HDLBPQ00341 Y_RNA.638-201ENST00000459374 113 ntBASIC3.14□□□□□ -1.91
HDLBPQ00341 Y_RNA.700-201ENST00000516806 100 ntBASIC3.14□□□□□ -1.91
HDLBPQ00341 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.14□□□□□ -1.91
HDLBPQ00341 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
HDLBPQ00341 Y_RNA.124-201ENST00000363339 93 ntBASIC3.13□□□□□ -1.91
HDLBPQ00341 Y_RNA.200-201ENST00000364018 102 ntBASIC3.13□□□□□ -1.91
HDLBPQ00341 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC3.13□□□□□ -1.91
HDLBPQ00341 BTF3P11-201ENST00000426582 477 ntBASIC3.13□□□□□ -1.91
HDLBPQ00341 AC018634.1-201ENST00000437554 401 ntBASIC3.13□□□□□ -1.91
HDLBPQ00341 AC010409.1-201ENST00000487382 476 ntBASIC3.13□□□□□ -1.91
HDLBPQ00341 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC3.13□□□□□ -1.91
HDLBPQ00341 RNU6-1337P-201ENST00000516525 95 ntBASIC3.13□□□□□ -1.91
HDLBPQ00341 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.13□□□□□ -1.91
HDLBPQ00341 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC3.13□□□□□ -1.91
HDLBPQ00341 MIR5194-201ENST00000582634 120 ntBASIC3.13□□□□□ -1.91
HDLBPQ00341 MIR3124-201ENST00000582636 67 ntBASIC3.13□□□□□ -1.91
HDLBPQ00341 AC007229.1-201ENST00000590455 412 ntBASIC3.13□□□□□ -1.91
HDLBPQ00341 U4.3-201ENST00000621047 82 ntBASIC3.13□□□□□ -1.91
HDLBPQ00341 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
HDLBPQ00341 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
HDLBPQ00341 RNU1-58P-201ENST00000362413 163 ntBASIC3.12□□□□□ -1.91
HDLBPQ00341 Y_RNA.117-201ENST00000363294 101 ntBASIC3.12□□□□□ -1.91
HDLBPQ00341 RNA5SP493-201ENST00000364115 91 ntBASIC3.12□□□□□ -1.91
HDLBPQ00341 RNU6-200P-201ENST00000364743 107 ntBASIC3.12□□□□□ -1.91
HDLBPQ00341 Y_RNA.310-201ENST00000365063 113 ntBASIC3.12□□□□□ -1.91
HDLBPQ00341 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC3.12□□□□□ -1.91
HDLBPQ00341 RPS15AP28-201ENST00000435088 386 ntBASIC3.12□□□□□ -1.91
HDLBPQ00341 TRBV12-1-201ENST00000479785 344 ntBASIC3.12□□□□□ -1.91
HDLBPQ00341 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC3.12□□□□□ -1.91
HDLBPQ00341 MIR4643-201ENST00000577473 78 ntBASIC3.12□□□□□ -1.91
HDLBPQ00341 SNORD53-201ENST00000579969 78 ntBASIC3.12□□□□□ -1.91
HDLBPQ00341 U6.73-201ENST00000619194 103 ntBASIC3.12□□□□□ -1.91
HDLBPQ00341 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
HDLBPQ00341 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
HDLBPQ00341 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
HDLBPQ00341 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
HDLBPQ00341 AC245060.5-201ENST00000610778 3293 ntBASIC3.11□□□□□ -1.91
HDLBPQ00341 SNORD115-3-201ENST00000363100 82 ntBASIC3.11□□□□□ -1.91
HDLBPQ00341 RNU6-899P-201ENST00000363947 107 ntBASIC3.11□□□□□ -1.91
HDLBPQ00341 SNORD114-6-201ENST00000364393 72 ntBASIC3.11□□□□□ -1.91
HDLBPQ00341 Y_RNA.292-201ENST00000364904 97 ntBASIC3.11□□□□□ -1.91
HDLBPQ00341 SNORA72.4-201ENST00000384174 132 ntBASIC3.11□□□□□ -1.91
HDLBPQ00341 SNORA70B-201ENST00000384210 135 ntBASIC3.11□□□□□ -1.91
HDLBPQ00341 MIR518C-201ENST00000384822 101 ntBASIC3.11□□□□□ -1.91
HDLBPQ00341 MIR1298-201ENST00000408783 112 ntBASIC3.11□□□□□ -1.91
HDLBPQ00341 SNORA11.4-201ENST00000408823 129 ntBASIC3.11□□□□□ -1.91
HDLBPQ00341 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC3.11□□□□□ -1.91
HDLBPQ00341 RPL39P40-201ENST00000445481 146 ntBASIC3.11□□□□□ -1.91
HDLBPQ00341 RPS20P10-201ENST00000451209 253 ntBASIC3.11□□□□□ -1.91
HDLBPQ00341 AC097462.1-201ENST00000514125 324 ntBASIC3.11□□□□□ -1.91
HDLBPQ00341 RNU6-1041P-201ENST00000516254 102 ntBASIC3.11□□□□□ -1.91
HDLBPQ00341 RNA5SP24-201ENST00000516478 95 ntBASIC3.11□□□□□ -1.91
HDLBPQ00341 RNU7-116P-201ENST00000516940 62 ntBASIC3.11□□□□□ -1.91
HDLBPQ00341 RNU7-172P-201ENST00000517125 64 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms