Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.21□□□□□ -2.06
RAE1P78406 AL031274.2-201ENST00000599419 203 ntBASIC2.21□□□□□ -2.06
RAE1P78406 AL162424.1-201ENST00000602325 221 ntBASIC2.21□□□□□ -2.06
RAE1P78406 Z82195.2-201ENST00000612348 18351 ntBASIC2.21□□□□□ -2.06
RAE1P78406 AC022202.1-201ENST00000613515 211 ntBASIC2.21□□□□□ -2.06
RAE1P78406 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.21□□□□□ -2.06
RAE1P78406 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.21□□□□□ -2.06
RAE1P78406 CENPCP1-201ENST00000533085 2578 ntBASIC2.21□□□□□ -2.06
RAE1P78406 ZNF271P-202ENST00000465539 1970 ntBASIC2.21□□□□□ -2.06
RAE1P78406 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.21□□□□□ -2.06
RAE1P78406 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.2□□□□□ -2.06
RAE1P78406 Y_RNA.82-201ENST00000363000 102 ntBASIC2.2□□□□□ -2.06
RAE1P78406 Y_RNA.92-201ENST00000363043 102 ntBASIC2.2□□□□□ -2.06
RAE1P78406 Y_RNA.235-201ENST00000364412 102 ntBASIC2.2□□□□□ -2.06
RAE1P78406 SNORD114-30-201ENST00000364448 72 ntBASIC2.2□□□□□ -2.06
RAE1P78406 RNU6-740P-201ENST00000364734 105 ntBASIC2.2□□□□□ -2.06
RAE1P78406 Y_RNA.306-201ENST00000365015 102 ntBASIC2.2□□□□□ -2.06
RAE1P78406 Y_RNA.312-201ENST00000365089 102 ntBASIC2.2□□□□□ -2.06
RAE1P78406 Y_RNA.322-201ENST00000365151 102 ntBASIC2.2□□□□□ -2.06
RAE1P78406 RNU6-407P-201ENST00000365280 104 ntBASIC2.2□□□□□ -2.06
RAE1P78406 Y_RNA.368-201ENST00000365547 113 ntBASIC2.2□□□□□ -2.06
RAE1P78406 RNU6ATAC19P-201ENST00000408096 110 ntBASIC2.2□□□□□ -2.06
RAE1P78406 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.2□□□□□ -2.06
RAE1P78406 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.2□□□□□ -2.06
RAE1P78406 AL513328.1-201ENST00000446460 224 ntBASIC2.2□□□□□ -2.06
RAE1P78406 Y_RNA.650-201ENST00000459002 102 ntBASIC2.2□□□□□ -2.06
RAE1P78406 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC2.2□□□□□ -2.06
RAE1P78406 RNU4-71P-201ENST00000516258 113 ntBASIC2.2□□□□□ -2.06
RAE1P78406 Y_RNA.777-201ENST00000516982 102 ntBASIC2.2□□□□□ -2.06
RAE1P78406 RNU6-111P-201ENST00000517179 105 ntBASIC2.2□□□□□ -2.06
RAE1P78406 AC009127.3-201ENST00000570531 403 ntBASIC2.2□□□□□ -2.06
RAE1P78406 MIR3162-201ENST00000581818 82 ntBASIC2.2□□□□□ -2.06
RAE1P78406 MIR5007-201ENST00000583098 95 ntBASIC2.2□□□□□ -2.06
RAE1P78406 Y_RNA.771-201ENST00000598668 102 ntBASIC2.2□□□□□ -2.06
RAE1P78406 AC006023.1-201ENST00000603944 259 ntBASIC2.2□□□□□ -2.06
RAE1P78406 AC141273.2-201ENST00000618989 130 ntBASIC2.2□□□□□ -2.06
RAE1P78406 Y_RNA.789-201ENST00000622480 102 ntBASIC2.2□□□□□ -2.06
RAE1P78406 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
RAE1P78406 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.19□□□□□ -2.06
RAE1P78406 RNU6-1272P-201ENST00000362776 107 ntBASIC2.19□□□□□ -2.06
RAE1P78406 RNU6-23P-201ENST00000363283 107 ntBASIC2.19□□□□□ -2.06
RAE1P78406 RNA5SP493-201ENST00000364115 91 ntBASIC2.19□□□□□ -2.06
RAE1P78406 RNY1-201ENST00000364228 113 ntBASIC2.19□□□□□ -2.06
RAE1P78406 RNU6-1318P-201ENST00000365389 103 ntBASIC2.19□□□□□ -2.06
RAE1P78406 RNU1-52P-201ENST00000384190 164 ntBASIC2.19□□□□□ -2.06
RAE1P78406 Y_RNA.456-201ENST00000384232 111 ntBASIC2.19□□□□□ -2.06
RAE1P78406 MIR1253-201ENST00000408273 105 ntBASIC2.19□□□□□ -2.06
RAE1P78406 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.19□□□□□ -2.06
RAE1P78406 RNU6-855P-201ENST00000410395 104 ntBASIC2.19□□□□□ -2.06
RAE1P78406 AC010154.1-201ENST00000425857 269 ntBASIC2.19□□□□□ -2.06
RAE1P78406 HMGN2P34-201ENST00000437647 269 ntBASIC2.19□□□□□ -2.06
RAE1P78406 AL135790.2-201ENST00000437701 267 ntBASIC2.19□□□□□ -2.06
RAE1P78406 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.19□□□□□ -2.06
RAE1P78406 RNA5SP20-201ENST00000515976 84 ntBASIC2.19□□□□□ -2.06
RAE1P78406 RNU6-794P-201ENST00000517261 64 ntBASIC2.19□□□□□ -2.06
RAE1P78406 AC027419.1-201ENST00000522976 328 ntBASIC2.19□□□□□ -2.06
RAE1P78406 AL137100.2-201ENST00000555786 315 ntBASIC2.19□□□□□ -2.06
RAE1P78406 MIR3169-201ENST00000578032 83 ntBASIC2.19□□□□□ -2.06
RAE1P78406 MIR4446-201ENST00000578505 67 ntBASIC2.19□□□□□ -2.06
RAE1P78406 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.19□□□□□ -2.06
RAE1P78406 AC090425.1-201ENST00000610007 140 ntBASIC2.19□□□□□ -2.06
RAE1P78406 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC2.19□□□□□ -2.06
RAE1P78406 AL078604.3-201ENST00000615580 211 ntBASIC2.19□□□□□ -2.06
RAE1P78406 AC078938.1-201ENST00000620993 318 ntBASIC2.19□□□□□ -2.06
RAE1P78406 MIR6766-201ENST00000622641 72 ntBASIC2.19□□□□□ -2.06
RAE1P78406 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.19□□□□□ -2.06
RAE1P78406 CTSLP2-204ENST00000629029 392 ntBASIC2.19□□□□□ -2.06
RAE1P78406 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.19□□□□□ -2.06
RAE1P78406 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.19□□□□□ -2.06
RAE1P78406 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
RAE1P78406 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.18□□□□□ -2.06
RAE1P78406 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
RAE1P78406 RNU1-58P-201ENST00000362413 163 ntBASIC2.18□□□□□ -2.06
RAE1P78406 SNORD115-3-201ENST00000363100 82 ntBASIC2.18□□□□□ -2.06
RAE1P78406 Y_RNA.257-201ENST00000364596 102 ntBASIC2.18□□□□□ -2.06
RAE1P78406 SNORA67.1-201ENST00000364749 141 ntBASIC2.18□□□□□ -2.06
RAE1P78406 RNU6-338P-201ENST00000383888 105 ntBASIC2.18□□□□□ -2.06
RAE1P78406 RNU6-662P-201ENST00000384253 104 ntBASIC2.18□□□□□ -2.06
RAE1P78406 RNU6-1289P-201ENST00000384431 106 ntBASIC2.18□□□□□ -2.06
RAE1P78406 SNORA67.4-201ENST00000384688 142 ntBASIC2.18□□□□□ -2.06
RAE1P78406 SNORA40.19-201ENST00000390846 128 ntBASIC2.18□□□□□ -2.06
RAE1P78406 AC108059.2-201ENST00000434626 151 ntBASIC2.18□□□□□ -2.06
RAE1P78406 ATP5J2P3-201ENST00000451550 258 ntBASIC2.18□□□□□ -2.06
RAE1P78406 AL139109.1-201ENST00000455491 297 ntBASIC2.18□□□□□ -2.06
RAE1P78406 SNORD2.1-201ENST00000458762 69 ntBASIC2.18□□□□□ -2.06
RAE1P78406 RPS27P22-201ENST00000478056 241 ntBASIC2.18□□□□□ -2.06
RAE1P78406 RNU6-1041P-201ENST00000516254 102 ntBASIC2.18□□□□□ -2.06
RAE1P78406 MIR4643-201ENST00000577473 78 ntBASIC2.18□□□□□ -2.06
RAE1P78406 MIR4282-201ENST00000583613 67 ntBASIC2.18□□□□□ -2.06
RAE1P78406 MIR4438-201ENST00000585271 93 ntBASIC2.18□□□□□ -2.06
RAE1P78406 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC2.18□□□□□ -2.06
RAE1P78406 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.18□□□□□ -2.06
RAE1P78406 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.18□□□□□ -2.06
RAE1P78406 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
RAE1P78406 RNA5SP289-201ENST00000362332 137 ntBASIC2.17□□□□□ -2.06
RAE1P78406 Y_RNA.287-201ENST00000364853 94 ntBASIC2.17□□□□□ -2.06
RAE1P78406 Y_RNA.310-201ENST00000365063 113 ntBASIC2.17□□□□□ -2.06
RAE1P78406 MIR634-201ENST00000385208 97 ntBASIC2.17□□□□□ -2.06
RAE1P78406 Y_RNA.590-201ENST00000410140 107 ntBASIC2.17□□□□□ -2.06
RAE1P78406 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 154.8 ms