Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 MTCO1P5-201ENST00000433573 344 ntBASIC-0.85□□□□□ -2.55
UBA52P62987 AL353572.1-201ENST00000442490 417 ntBASIC-0.85□□□□□ -2.55
UBA52P62987 MRPS10P1-201ENST00000448483 130 ntBASIC-0.85□□□□□ -2.55
UBA52P62987 RNU7-102P-201ENST00000458948 62 ntBASIC-0.85□□□□□ -2.55
UBA52P62987 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC-0.85□□□□□ -2.55
UBA52P62987 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC-0.85□□□□□ -2.55
UBA52P62987 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC-0.85□□□□□ -2.55
UBA52P62987 RNU6-504P-201ENST00000516568 104 ntBASIC-0.85□□□□□ -2.55
UBA52P62987 RNU6-551P-201ENST00000516661 103 ntBASIC-0.85□□□□□ -2.55
UBA52P62987 MIR4432-201ENST00000581823 84 ntBASIC-0.85□□□□□ -2.55
UBA52P62987 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.85□□□□□ -2.55
UBA52P62987 AC012467.1-201ENST00000607740 256 ntBASIC-0.85□□□□□ -2.55
UBA52P62987 SNORD38B-202ENST00000625943 69 ntBASIC-0.85□□□□□ -2.55
UBA52P62987 SNORD114-11-201ENST00000363738 75 ntBASIC-0.86□□□□□ -2.55
UBA52P62987 RNA5SP117-201ENST00000365294 118 ntBASIC-0.86□□□□□ -2.55
UBA52P62987 RNU6-396P-201ENST00000365369 105 ntBASIC-0.86□□□□□ -2.55
UBA52P62987 USP9YP25-201ENST00000457708 443 ntBASIC-0.86□□□□□ -2.55
UBA52P62987 AC114755.3-201ENST00000481111 251 ntBASIC-0.86□□□□□ -2.55
UBA52P62987 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC-0.86□□□□□ -2.55
UBA52P62987 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC-0.86□□□□□ -2.55
UBA52P62987 AC008521.1-201ENST00000587471 187 ntBASIC-0.86□□□□□ -2.55
UBA52P62987 AC068792.1-201ENST00000621354 417 ntBASIC-0.86□□□□□ -2.55
UBA52P62987 AC097460.3-201ENST00000623099 442 ntBASIC-0.86□□□□□ -2.55
UBA52P62987 AC106754.1-201ENST00000562632 1513 ntBASIC-0.86□□□□□ -2.55
UBA52P62987 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC-0.87□□□□□ -2.55
UBA52P62987 Y_RNA.267-201ENST00000364679 109 ntBASIC-0.87□□□□□ -2.55
UBA52P62987 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC-0.87□□□□□ -2.55
UBA52P62987 MTCO2P23-201ENST00000425216 680 ntBASIC-0.87□□□□□ -2.55
UBA52P62987 EXOSC3P1-201ENST00000448649 500 ntBASIC-0.87□□□□□ -2.55
UBA52P62987 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC-0.87□□□□□ -2.55
UBA52P62987 U8.21-201ENST00000459536 136 ntBASIC-0.87□□□□□ -2.55
UBA52P62987 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC-0.87□□□□□ -2.55
UBA52P62987 MIR544B-201ENST00000582372 78 ntBASIC-0.87□□□□□ -2.55
UBA52P62987 AC006380.1-201ENST00000603598 186 ntBASIC-0.87□□□□□ -2.55
UBA52P62987 OR4H6P-202ENST00000603819 340 ntBASIC-0.87□□□□□ -2.55
UBA52P62987 AP002802.2-201ENST00000605877 235 ntBASIC-0.87□□□□□ -2.55
UBA52P62987 RNU6-462P-201ENST00000362659 105 ntBASIC-0.88□□□□□ -2.55
UBA52P62987 AC117470.1-201ENST00000381974 330 ntBASIC-0.88□□□□□ -2.55
UBA52P62987 RNU6-468P-201ENST00000384003 109 ntBASIC-0.88□□□□□ -2.55
UBA52P62987 MIR136-201ENST00000385207 82 ntBASIC-0.88□□□□□ -2.55
UBA52P62987 RNU6-205P-201ENST00000390858 107 ntBASIC-0.88□□□□□ -2.55
UBA52P62987 SNORA26.5-201ENST00000391215 123 ntBASIC-0.88□□□□□ -2.55
UBA52P62987 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC-0.88□□□□□ -2.55
UBA52P62987 SNORD123-201ENST00000459473 70 ntBASIC-0.88□□□□□ -2.55
UBA52P62987 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC-0.88□□□□□ -2.55
UBA52P62987 RNU2-60P-201ENST00000517290 128 ntBASIC-0.88□□□□□ -2.55
UBA52P62987 AC107934.1-201ENST00000522215 217 ntBASIC-0.88□□□□□ -2.55
UBA52P62987 RPL21P9-201ENST00000556149 474 ntBASIC-0.88□□□□□ -2.55
UBA52P62987 AC090617.3-201ENST00000573670 475 ntBASIC-0.88□□□□□ -2.55
UBA52P62987 MIR4752-201ENST00000579672 72 ntBASIC-0.88□□□□□ -2.55
UBA52P62987 SNORD92-201ENST00000585078 85 ntBASIC-0.88□□□□□ -2.55
UBA52P62987 MTATP6P2-201ENST00000603319 678 ntBASIC-0.88□□□□□ -2.55
UBA52P62987 AP000907.4-201ENST00000604143 237 ntBASIC-0.88□□□□□ -2.55
UBA52P62987 AC091965.4-201ENST00000607691 587 ntBASIC-0.88□□□□□ -2.55
UBA52P62987 UGP2-231ENST00000627474 264 ntTSL 5 BASIC-0.88□□□□□ -2.55
UBA52P62987 AL162726.3-218ENST00000636401 95 ntBASIC-0.88□□□□□ -2.55
UBA52P62987 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC-0.88□□□□□ -2.55
UBA52P62987 AC073343.1-201ENST00000328239 651 ntBASIC-0.89□□□□□ -2.55
UBA52P62987 Y_RNA.46-201ENST00000362695 102 ntBASIC-0.89□□□□□ -2.55
UBA52P62987 RNU4-21P-201ENST00000362802 126 ntBASIC-0.89□□□□□ -2.55
UBA52P62987 RNU5E-10P-201ENST00000363506 118 ntBASIC-0.89□□□□□ -2.55
UBA52P62987 SNORA24.1-201ENST00000384401 135 ntBASIC-0.89□□□□□ -2.55
UBA52P62987 MIR562-201ENST00000384894 95 ntBASIC-0.89□□□□□ -2.55
UBA52P62987 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC-0.89□□□□□ -2.55
UBA52P62987 AC243428.1-201ENST00000421099 264 ntBASIC-0.89□□□□□ -2.55
UBA52P62987 AL512326.2-201ENST00000426359 151 ntBASIC-0.89□□□□□ -2.55
UBA52P62987 SUMO1P3-201ENST00000439961 304 ntBASIC-0.89□□□□□ -2.55
UBA52P62987 MTND1P26-201ENST00000440488 538 ntBASIC-0.89□□□□□ -2.55
UBA52P62987 RNU7-182P-201ENST00000459009 62 ntBASIC-0.89□□□□□ -2.55
UBA52P62987 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC-0.89□□□□□ -2.55
UBA52P62987 Y_RNA.654-201ENST00000497848 106 ntBASIC-0.89□□□□□ -2.55
UBA52P62987 AC097462.1-201ENST00000514125 324 ntBASIC-0.89□□□□□ -2.55
UBA52P62987 RNU7-51P-201ENST00000516560 62 ntBASIC-0.89□□□□□ -2.55
UBA52P62987 AC068587.5-201ENST00000528506 175 ntBASIC-0.89□□□□□ -2.55
UBA52P62987 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC-0.89□□□□□ -2.55
UBA52P62987 AC123904.2-201ENST00000548059 300 ntBASIC-0.89□□□□□ -2.55
UBA52P62987 MTND1P8-201ENST00000571424 950 ntBASIC-0.89□□□□□ -2.55
UBA52P62987 MIR548AD-201ENST00000584780 82 ntBASIC-0.89□□□□□ -2.55
UBA52P62987 AC245297.2-201ENST00000610119 565 ntBASIC-0.89□□□□□ -2.55
UBA52P62987 AC139792.3-201ENST00000623525 224 ntBASIC-0.89□□□□□ -2.55
UBA52P62987 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC-0.89□□□□□ -2.55
UBA52P62987 RNU6-480P-201ENST00000384332 107 ntBASIC-0.9□□□□□ -2.55
UBA52P62987 MIR15B-201ENST00000385045 98 ntBASIC-0.9□□□□□ -2.55
UBA52P62987 BTBD7P2-201ENST00000441962 620 ntBASIC-0.9□□□□□ -2.55
UBA52P62987 RNU6-344P-201ENST00000516635 111 ntBASIC-0.9□□□□□ -2.55
UBA52P62987 RNU6-448P-201ENST00000517052 107 ntBASIC-0.9□□□□□ -2.55
UBA52P62987 AC022616.3-201ENST00000523940 148 ntBASIC-0.9□□□□□ -2.55
UBA52P62987 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-0.9□□□□□ -2.55
UBA52P62987 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC-0.9□□□□□ -2.55
UBA52P62987 AC005776.1-201ENST00000603164 290 ntBASIC-0.9□□□□□ -2.55
UBA52P62987 AL442067.1-201ENST00000613261 223 ntBASIC-0.9□□□□□ -2.55
UBA52P62987 MIR6514-201ENST00000622549 70 ntBASIC-0.9□□□□□ -2.55
UBA52P62987 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC-0.91□□□□□ -2.56
UBA52P62987 MIR655-201ENST00000362159 97 ntBASIC-0.91□□□□□ -2.56
UBA52P62987 MIR148A-201ENST00000362215 68 ntBASIC-0.91□□□□□ -2.56
UBA52P62987 RNU4-32P-201ENST00000363404 141 ntBASIC-0.91□□□□□ -2.56
UBA52P62987 Y_RNA.416-201ENST00000384014 113 ntBASIC-0.91□□□□□ -2.56
UBA52P62987 FGFR1OP2P1-201ENST00000395943 500 ntBASIC-0.91□□□□□ -2.56
UBA52P62987 RNU2-8P-201ENST00000410727 190 ntBASIC-0.91□□□□□ -2.56
UBA52P62987 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC-0.91□□□□□ -2.56
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms