Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 RPL23AP7-203ENST00000449021 469 ntBASIC3.28□□□□□ -1.88
CHMP4BP1P59074 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC3.28□□□□□ -1.88
CHMP4BP1P59074 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.28□□□□□ -1.88
CHMP4BP1P59074 RNU6-561P-201ENST00000516222 102 ntBASIC3.28□□□□□ -1.88
CHMP4BP1P59074 RNU6-1337P-201ENST00000516525 95 ntBASIC3.28□□□□□ -1.88
CHMP4BP1P59074 RNU6-965P-201ENST00000516721 96 ntBASIC3.28□□□□□ -1.88
CHMP4BP1P59074 AC109329.2-201ENST00000519658 482 ntBASIC3.28□□□□□ -1.88
CHMP4BP1P59074 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC3.28□□□□□ -1.88
CHMP4BP1P59074 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
CHMP4BP1P59074 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
CHMP4BP1P59074 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
CHMP4BP1P59074 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CHMP4BP1P59074 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC3.27□□□□□ -1.89
CHMP4BP1P59074 RNU6-899P-201ENST00000363947 107 ntBASIC3.27□□□□□ -1.89
CHMP4BP1P59074 Y_RNA.215-201ENST00000364204 112 ntBASIC3.27□□□□□ -1.89
CHMP4BP1P59074 RNU6-449P-201ENST00000383914 107 ntBASIC3.27□□□□□ -1.89
CHMP4BP1P59074 Y_RNA.400-201ENST00000383963 111 ntBASIC3.27□□□□□ -1.89
CHMP4BP1P59074 MIR561-201ENST00000385216 97 ntBASIC3.27□□□□□ -1.89
CHMP4BP1P59074 RNU6-710P-201ENST00000410424 105 ntBASIC3.27□□□□□ -1.89
CHMP4BP1P59074 RNU6-383P-201ENST00000410864 94 ntBASIC3.27□□□□□ -1.89
CHMP4BP1P59074 AC016909.1-201ENST00000415916 166 ntBASIC3.27□□□□□ -1.89
CHMP4BP1P59074 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.27□□□□□ -1.89
CHMP4BP1P59074 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC3.27□□□□□ -1.89
CHMP4BP1P59074 AC108938.1-201ENST00000451204 136 ntBASIC3.27□□□□□ -1.89
CHMP4BP1P59074 AC245047.8-201ENST00000456455 284 ntBASIC3.27□□□□□ -1.89
CHMP4BP1P59074 SNORD65B-201ENST00000459126 73 ntBASIC3.27□□□□□ -1.89
CHMP4BP1P59074 SRIP1-201ENST00000489235 288 ntBASIC3.27□□□□□ -1.89
CHMP4BP1P59074 Y_RNA.797-201ENST00000515977 94 ntBASIC3.27□□□□□ -1.89
CHMP4BP1P59074 RN7SKP164-201ENST00000516138 266 ntBASIC3.27□□□□□ -1.89
CHMP4BP1P59074 RNU6-426P-201ENST00000516464 97 ntBASIC3.27□□□□□ -1.89
CHMP4BP1P59074 SNORA31.26-201ENST00000517250 137 ntBASIC3.27□□□□□ -1.89
CHMP4BP1P59074 AC022616.8-201ENST00000533569 253 ntBASIC3.27□□□□□ -1.89
CHMP4BP1P59074 MIR4744-201ENST00000581563 82 ntBASIC3.27□□□□□ -1.89
CHMP4BP1P59074 MIR6733-201ENST00000635723 61 ntBASIC3.27□□□□□ -1.89
CHMP4BP1P59074 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CHMP4BP1P59074 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
CHMP4BP1P59074 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
CHMP4BP1P59074 AC073325.2-201ENST00000339545 159 ntBASIC3.26□□□□□ -1.89
CHMP4BP1P59074 RNU6-975P-201ENST00000384296 105 ntBASIC3.26□□□□□ -1.89
CHMP4BP1P59074 SNORA8.3-201ENST00000384679 139 ntBASIC3.26□□□□□ -1.89
CHMP4BP1P59074 Y_RNA.568-201ENST00000384742 113 ntBASIC3.26□□□□□ -1.89
CHMP4BP1P59074 MIR196B-201ENST00000384852 84 ntBASIC3.26□□□□□ -1.89
CHMP4BP1P59074 MIR569-201ENST00000385228 96 ntBASIC3.26□□□□□ -1.89
CHMP4BP1P59074 SNORD88.1-201ENST00000408684 91 ntBASIC3.26□□□□□ -1.89
CHMP4BP1P59074 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.26□□□□□ -1.89
CHMP4BP1P59074 AC117454.1-201ENST00000491120 168 ntBASIC3.26□□□□□ -1.89
CHMP4BP1P59074 RNU7-121P-201ENST00000516604 62 ntBASIC3.26□□□□□ -1.89
CHMP4BP1P59074 AC027419.1-201ENST00000522976 328 ntBASIC3.26□□□□□ -1.89
CHMP4BP1P59074 PRELID2P1-201ENST00000552837 301 ntBASIC3.26□□□□□ -1.89
CHMP4BP1P59074 MIR3124-201ENST00000582636 67 ntBASIC3.26□□□□□ -1.89
CHMP4BP1P59074 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
CHMP4BP1P59074 RNU6-151P-201ENST00000364158 107 ntBASIC3.25□□□□□ -1.89
CHMP4BP1P59074 SNORD56.5-201ENST00000364281 72 ntBASIC3.25□□□□□ -1.89
CHMP4BP1P59074 RNU2-52P-201ENST00000410680 190 ntBASIC3.25□□□□□ -1.89
CHMP4BP1P59074 RNU6-57P-201ENST00000411348 103 ntBASIC3.25□□□□□ -1.89
CHMP4BP1P59074 AL162725.1-201ENST00000435405 301 ntBASIC3.25□□□□□ -1.89
CHMP4BP1P59074 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC3.25□□□□□ -1.89
CHMP4BP1P59074 RNU6-63P-201ENST00000516690 95 ntBASIC3.25□□□□□ -1.89
CHMP4BP1P59074 AC007536.1-201ENST00000533382 349 ntBASIC3.25□□□□□ -1.89
CHMP4BP1P59074 AC109810.1-201ENST00000534066 224 ntBASIC3.25□□□□□ -1.89
CHMP4BP1P59074 Y_RNA.802-201ENST00000614892 130 ntBASIC3.25□□□□□ -1.89
CHMP4BP1P59074 Six3os1_7.1-201ENST00000621512 201 ntBASIC3.25□□□□□ -1.89
CHMP4BP1P59074 snoZ196.1-201ENST00000625269 89 ntBASIC3.25□□□□□ -1.89
CHMP4BP1P59074 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CHMP4BP1P59074 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
CHMP4BP1P59074 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
CHMP4BP1P59074 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.24□□□□□ -1.89
CHMP4BP1P59074 SNORA27.1-201ENST00000362604 124 ntBASIC3.24□□□□□ -1.89
CHMP4BP1P59074 RNU6-1205P-201ENST00000363625 106 ntBASIC3.24□□□□□ -1.89
CHMP4BP1P59074 Y_RNA.229-201ENST00000364347 113 ntBASIC3.24□□□□□ -1.89
CHMP4BP1P59074 RNU6-418P-201ENST00000384035 107 ntBASIC3.24□□□□□ -1.89
CHMP4BP1P59074 MIR873-201ENST00000401120 77 ntBASIC3.24□□□□□ -1.89
CHMP4BP1P59074 AL590004.2-201ENST00000404787 371 ntBASIC3.24□□□□□ -1.89
CHMP4BP1P59074 RNU2-48P-201ENST00000410694 191 ntBASIC3.24□□□□□ -1.89
CHMP4BP1P59074 RNA5SP184-201ENST00000411071 108 ntBASIC3.24□□□□□ -1.89
CHMP4BP1P59074 CR769767.1-201ENST00000436337 346 ntBASIC3.24□□□□□ -1.89
CHMP4BP1P59074 RNU6-221P-201ENST00000459541 99 ntBASIC3.24□□□□□ -1.89
CHMP4BP1P59074 RN7SL429P-201ENST00000479090 223 ntBASIC3.24□□□□□ -1.89
CHMP4BP1P59074 RN7SL489P-201ENST00000486185 223 ntBASIC3.24□□□□□ -1.89
CHMP4BP1P59074 RN7SL327P-201ENST00000488659 223 ntBASIC3.24□□□□□ -1.89
CHMP4BP1P59074 RNU6-1007P-201ENST00000516586 107 ntBASIC3.24□□□□□ -1.89
CHMP4BP1P59074 AC079600.2-201ENST00000550076 130 ntBASIC3.24□□□□□ -1.89
CHMP4BP1P59074 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CHMP4BP1P59074 AP001485.1-201ENST00000604799 199 ntBASIC3.24□□□□□ -1.89
CHMP4BP1P59074 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC3.24□□□□□ -1.89
CHMP4BP1P59074 RN7SL853P-201ENST00000617250 223 ntBASIC3.24□□□□□ -1.89
CHMP4BP1P59074 Y_RNA.778-201ENST00000620203 90 ntBASIC3.24□□□□□ -1.89
CHMP4BP1P59074 MTND1P7-201ENST00000632801 297 ntBASIC3.24□□□□□ -1.89
CHMP4BP1P59074 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.23□□□□□ -1.89
CHMP4BP1P59074 AL356292.1-201ENST00000283110 373 ntBASIC3.23□□□□□ -1.89
CHMP4BP1P59074 Y_RNA.497-201ENST00000384447 98 ntBASIC3.23□□□□□ -1.89
CHMP4BP1P59074 MIR526A2-201ENST00000390198 65 ntBASIC3.23□□□□□ -1.89
CHMP4BP1P59074 SNORA40.19-201ENST00000390846 128 ntBASIC3.23□□□□□ -1.89
CHMP4BP1P59074 RNU6-239P-201ENST00000390990 99 ntBASIC3.23□□□□□ -1.89
CHMP4BP1P59074 EBAG9P1-201ENST00000418955 543 ntBASIC3.23□□□□□ -1.89
CHMP4BP1P59074 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC3.23□□□□□ -1.89
CHMP4BP1P59074 RPS29P6-201ENST00000438196 145 ntBASIC3.23□□□□□ -1.89
CHMP4BP1P59074 AC016925.1-201ENST00000458303 298 ntBASIC3.23□□□□□ -1.89
CHMP4BP1P59074 AC005840.1-201ENST00000498412 377 ntBASIC3.23□□□□□ -1.89
CHMP4BP1P59074 RNU7-115P-201ENST00000516433 55 ntBASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms