Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.49□□□□□ -2.01
CLRN1P58418 Y_RNA.182-201ENST00000363880 111 ntBASIC2.49□□□□□ -2.01
CLRN1P58418 MIR1253-201ENST00000408273 105 ntBASIC2.49□□□□□ -2.01
CLRN1P58418 RNA5SP511-201ENST00000410487 115 ntBASIC2.49□□□□□ -2.01
CLRN1P58418 RNA5SP344-201ENST00000411081 104 ntBASIC2.49□□□□□ -2.01
CLRN1P58418 SRIP3-201ENST00000413200 219 ntBASIC2.49□□□□□ -2.01
CLRN1P58418 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.49□□□□□ -2.01
CLRN1P58418 AC009238.1-201ENST00000442165 424 ntBASIC2.49□□□□□ -2.01
CLRN1P58418 UBBP3-201ENST00000445497 241 ntBASIC2.49□□□□□ -2.01
CLRN1P58418 AC009237.6-201ENST00000446969 424 ntBASIC2.49□□□□□ -2.01
CLRN1P58418 RPL36AP21-201ENST00000490372 323 ntBASIC2.49□□□□□ -2.01
CLRN1P58418 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.49□□□□□ -2.01
CLRN1P58418 MIR3605-201ENST00000583214 100 ntBASIC2.49□□□□□ -2.01
CLRN1P58418 MIR4438-201ENST00000585271 93 ntBASIC2.49□□□□□ -2.01
CLRN1P58418 AC005972.2-201ENST00000604690 348 ntBASIC2.49□□□□□ -2.01
CLRN1P58418 AC104465.1-201ENST00000611365 139 ntBASIC2.49□□□□□ -2.01
CLRN1P58418 AC021753.1-201ENST00000635724 168 ntBASIC2.49□□□□□ -2.01
CLRN1P58418 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
CLRN1P58418 Y_RNA.121-201ENST00000363309 113 ntBASIC2.48□□□□□ -2.01
CLRN1P58418 RNU1-22P-201ENST00000363334 158 ntBASIC2.48□□□□□ -2.01
CLRN1P58418 RNU6-117P-201ENST00000365415 107 ntBASIC2.48□□□□□ -2.01
CLRN1P58418 RNU6-969P-201ENST00000383900 105 ntBASIC2.48□□□□□ -2.01
CLRN1P58418 RNU6-144P-201ENST00000383951 107 ntBASIC2.48□□□□□ -2.01
CLRN1P58418 Y_RNA.412-201ENST00000384001 104 ntBASIC2.48□□□□□ -2.01
CLRN1P58418 RNU6-1323P-201ENST00000384025 107 ntBASIC2.48□□□□□ -2.01
CLRN1P58418 RNU6-136P-201ENST00000384663 107 ntBASIC2.48□□□□□ -2.01
CLRN1P58418 MIR526A2-201ENST00000390198 65 ntBASIC2.48□□□□□ -2.01
CLRN1P58418 SNORA36B-201ENST00000410438 131 ntBASIC2.48□□□□□ -2.01
CLRN1P58418 RNU4-61P-201ENST00000411243 107 ntBASIC2.48□□□□□ -2.01
CLRN1P58418 RNA5SP492-201ENST00000411330 114 ntBASIC2.48□□□□□ -2.01
CLRN1P58418 AL135786.1-201ENST00000415892 214 ntBASIC2.48□□□□□ -2.01
CLRN1P58418 AC010154.1-201ENST00000425857 269 ntBASIC2.48□□□□□ -2.01
CLRN1P58418 RPS29P6-201ENST00000438196 145 ntBASIC2.48□□□□□ -2.01
CLRN1P58418 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC2.48□□□□□ -2.01
CLRN1P58418 AC091021.1-201ENST00000468051 388 ntBASIC2.48□□□□□ -2.01
CLRN1P58418 AC003982.1-202ENST00000469928 248 ntBASIC2.48□□□□□ -2.01
CLRN1P58418 RN7SKP164-201ENST00000516138 266 ntBASIC2.48□□□□□ -2.01
CLRN1P58418 NDUFA5P6-201ENST00000542110 379 ntBASIC2.48□□□□□ -2.01
CLRN1P58418 POLR3GP1-201ENST00000594073 261 ntBASIC2.48□□□□□ -2.01
CLRN1P58418 AP003357.1-201ENST00000604497 148 ntBASIC2.48□□□□□ -2.01
CLRN1P58418 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.48□□□□□ -2.01
CLRN1P58418 AL449363.1-201ENST00000617815 186 ntBASIC2.48□□□□□ -2.01
CLRN1P58418 U4atac.1-201ENST00000618345 95 ntBASIC2.48□□□□□ -2.01
CLRN1P58418 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
CLRN1P58418 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.48□□□□□ -2.01
CLRN1P58418 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.48□□□□□ -2.01
CLRN1P58418 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
CLRN1P58418 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.47□□□□□ -2.01
CLRN1P58418 RNU6-746P-201ENST00000384112 109 ntBASIC2.47□□□□□ -2.01
CLRN1P58418 RNU6-804P-201ENST00000384286 107 ntBASIC2.47□□□□□ -2.01
CLRN1P58418 RNU5E-9P-201ENST00000411164 104 ntBASIC2.47□□□□□ -2.01
CLRN1P58418 Z92545.1-201ENST00000411782 234 ntBASIC2.47□□□□□ -2.01
CLRN1P58418 HMGN2P34-201ENST00000437647 269 ntBASIC2.47□□□□□ -2.01
CLRN1P58418 RPS27AP9-201ENST00000477681 438 ntBASIC2.47□□□□□ -2.01
CLRN1P58418 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.47□□□□□ -2.01
CLRN1P58418 AC097462.1-201ENST00000514125 324 ntBASIC2.47□□□□□ -2.01
CLRN1P58418 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.47□□□□□ -2.01
CLRN1P58418 AC015720.1-201ENST00000565251 277 ntBASIC2.47□□□□□ -2.01
CLRN1P58418 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.47□□□□□ -2.01
CLRN1P58418 AC093732.2-201ENST00000607950 274 ntBASIC2.47□□□□□ -2.01
CLRN1P58418 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
CLRN1P58418 MIR367-201ENST00000362299 68 ntBASIC2.46□□□□□ -2.02
CLRN1P58418 Y_RNA.8-201ENST00000362353 102 ntBASIC2.46□□□□□ -2.02
CLRN1P58418 Y_RNA.75-201ENST00000362927 97 ntBASIC2.46□□□□□ -2.02
CLRN1P58418 Y_RNA.99-201ENST00000363138 105 ntBASIC2.46□□□□□ -2.02
CLRN1P58418 SNORD114-6-201ENST00000364393 72 ntBASIC2.46□□□□□ -2.02
CLRN1P58418 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.46□□□□□ -2.02
CLRN1P58418 RNU6-1072P-201ENST00000384703 107 ntBASIC2.46□□□□□ -2.02
CLRN1P58418 RNU6-443P-201ENST00000384780 107 ntBASIC2.46□□□□□ -2.02
CLRN1P58418 MIR1262-201ENST00000408276 93 ntBASIC2.46□□□□□ -2.02
CLRN1P58418 RNU6-394P-201ENST00000410735 107 ntBASIC2.46□□□□□ -2.02
CLRN1P58418 RNU6-383P-201ENST00000410864 94 ntBASIC2.46□□□□□ -2.02
CLRN1P58418 RNU6-1135P-201ENST00000411083 103 ntBASIC2.46□□□□□ -2.02
CLRN1P58418 AL139132.1-201ENST00000431587 344 ntBASIC2.46□□□□□ -2.02
CLRN1P58418 AL162725.1-201ENST00000435405 301 ntBASIC2.46□□□□□ -2.02
CLRN1P58418 AC011406.1-201ENST00000512440 370 ntBASIC2.46□□□□□ -2.02
CLRN1P58418 SCARNA8-201ENST00000515924 131 ntBASIC2.46□□□□□ -2.02
CLRN1P58418 Y_RNA.797-201ENST00000515977 94 ntBASIC2.46□□□□□ -2.02
CLRN1P58418 RNU6-453P-201ENST00000516819 85 ntBASIC2.46□□□□□ -2.02
CLRN1P58418 RNU7-116P-201ENST00000516940 62 ntBASIC2.46□□□□□ -2.02
CLRN1P58418 RNU7-172P-201ENST00000517125 64 ntBASIC2.46□□□□□ -2.02
CLRN1P58418 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC2.46□□□□□ -2.02
CLRN1P58418 AC127455.1-201ENST00000565496 145 ntBASIC2.46□□□□□ -2.02
CLRN1P58418 MIR4724-201ENST00000579485 89 ntBASIC2.46□□□□□ -2.02
CLRN1P58418 MIR3133-201ENST00000583157 78 ntBASIC2.46□□□□□ -2.02
CLRN1P58418 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
CLRN1P58418 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
CLRN1P58418 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
CLRN1P58418 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
CLRN1P58418 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
CLRN1P58418 Y_RNA.170-201ENST00000363746 110 ntBASIC2.45□□□□□ -2.02
CLRN1P58418 RNU4-13P-201ENST00000364019 141 ntBASIC2.45□□□□□ -2.02
CLRN1P58418 SNORD56.5-201ENST00000364281 72 ntBASIC2.45□□□□□ -2.02
CLRN1P58418 RNU6-312P-201ENST00000364629 107 ntBASIC2.45□□□□□ -2.02
CLRN1P58418 Y_RNA.506-201ENST00000384494 102 ntBASIC2.45□□□□□ -2.02
CLRN1P58418 RNU6-417P-201ENST00000384712 107 ntBASIC2.45□□□□□ -2.02
CLRN1P58418 MIR634-201ENST00000385208 97 ntBASIC2.45□□□□□ -2.02
CLRN1P58418 MIR181B1-201ENST00000385240 110 ntBASIC2.45□□□□□ -2.02
CLRN1P58418 AC087499.2-201ENST00000432861 149 ntBASIC2.45□□□□□ -2.02
CLRN1P58418 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 224.9 ms