Protein–RNA interactions for Protein: P51957

NEK4, Serine/threonine-protein kinase Nek4, humanhuman

Predictions only

Length 841 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4P51957 RNA5SP20-201ENST00000515976 84 ntBASIC2.76□□□□□ -1.97
NEK4P51957 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.76□□□□□ -1.97
NEK4P51957 AC027419.1-201ENST00000522976 328 ntBASIC2.76□□□□□ -1.97
NEK4P51957 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.76□□□□□ -1.97
NEK4P51957 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.76□□□□□ -1.97
NEK4P51957 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
NEK4P51957 AC005336.3-201ENST00000623833 2679 ntBASIC2.75□□□□□ -1.97
NEK4P51957 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
NEK4P51957 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.75□□□□□ -1.97
NEK4P51957 CENPCP1-201ENST00000533085 2578 ntBASIC2.75□□□□□ -1.97
NEK4P51957 Y_RNA.82-201ENST00000363000 102 ntBASIC2.75□□□□□ -1.97
NEK4P51957 Y_RNA.92-201ENST00000363043 102 ntBASIC2.75□□□□□ -1.97
NEK4P51957 RNA5SP493-201ENST00000364115 91 ntBASIC2.75□□□□□ -1.97
NEK4P51957 Y_RNA.235-201ENST00000364412 102 ntBASIC2.75□□□□□ -1.97
NEK4P51957 Y_RNA.257-201ENST00000364596 102 ntBASIC2.75□□□□□ -1.97
NEK4P51957 Y_RNA.306-201ENST00000365015 102 ntBASIC2.75□□□□□ -1.97
NEK4P51957 Y_RNA.312-201ENST00000365089 102 ntBASIC2.75□□□□□ -1.97
NEK4P51957 Y_RNA.322-201ENST00000365151 102 ntBASIC2.75□□□□□ -1.97
NEK4P51957 Y_RNA.368-201ENST00000365547 113 ntBASIC2.75□□□□□ -1.97
NEK4P51957 RNU6-1289P-201ENST00000384431 106 ntBASIC2.75□□□□□ -1.97
NEK4P51957 MIR29C-201ENST00000385231 88 ntBASIC2.75□□□□□ -1.97
NEK4P51957 RNU6ATAC19P-201ENST00000408096 110 ntBASIC2.75□□□□□ -1.97
NEK4P51957 HSPE1P13-201ENST00000451143 297 ntBASIC2.75□□□□□ -1.97
NEK4P51957 AL139109.1-201ENST00000455491 297 ntBASIC2.75□□□□□ -1.97
NEK4P51957 Y_RNA.650-201ENST00000459002 102 ntBASIC2.75□□□□□ -1.97
NEK4P51957 Y_RNA.777-201ENST00000516982 102 ntBASIC2.75□□□□□ -1.97
NEK4P51957 AC136628.3-201ENST00000521868 290 ntBASIC2.75□□□□□ -1.97
NEK4P51957 Y_RNA.771-201ENST00000598668 102 ntBASIC2.75□□□□□ -1.97
NEK4P51957 Y_RNA.789-201ENST00000622480 102 ntBASIC2.75□□□□□ -1.97
NEK4P51957 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
NEK4P51957 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
NEK4P51957 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.74□□□□□ -1.97
NEK4P51957 Y_RNA.65-201ENST00000362846 100 ntBASIC2.74□□□□□ -1.97
NEK4P51957 Y_RNA.117-201ENST00000363294 101 ntBASIC2.74□□□□□ -1.97
NEK4P51957 Y_RNA.122-201ENST00000363331 96 ntBASIC2.74□□□□□ -1.97
NEK4P51957 RNY1-201ENST00000364228 113 ntBASIC2.74□□□□□ -1.97
NEK4P51957 RNU6-407P-201ENST00000365280 104 ntBASIC2.74□□□□□ -1.97
NEK4P51957 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.74□□□□□ -1.97
NEK4P51957 RN7SL636P-201ENST00000497504 294 ntBASIC2.74□□□□□ -1.97
NEK4P51957 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.74□□□□□ -1.97
NEK4P51957 RNU4-71P-201ENST00000516258 113 ntBASIC2.74□□□□□ -1.97
NEK4P51957 RNU6-1146P-201ENST00000516282 102 ntBASIC2.74□□□□□ -1.97
NEK4P51957 SNORA31.15-201ENST00000516771 132 ntBASIC2.74□□□□□ -1.97
NEK4P51957 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.74□□□□□ -1.97
NEK4P51957 MIR3169-201ENST00000578032 83 ntBASIC2.74□□□□□ -1.97
NEK4P51957 MIR4282-201ENST00000583613 67 ntBASIC2.74□□□□□ -1.97
NEK4P51957 AL031274.2-201ENST00000599419 203 ntBASIC2.74□□□□□ -1.97
NEK4P51957 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC2.74□□□□□ -1.97
NEK4P51957 AL353149.1-201ENST00000610667 244 ntBASIC2.74□□□□□ -1.97
NEK4P51957 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.74□□□□□ -1.97
NEK4P51957 ZNF720P1-201ENST00000562403 1939 ntBASIC2.74□□□□□ -1.97
NEK4P51957 snoU2-30.2-201ENST00000362805 70 ntBASIC2.73□□□□□ -1.97
NEK4P51957 Y_RNA.76-201ENST00000362931 109 ntBASIC2.73□□□□□ -1.97
NEK4P51957 RNU6-801P-201ENST00000364087 105 ntBASIC2.73□□□□□ -1.97
NEK4P51957 Y_RNA.269-201ENST00000364685 89 ntBASIC2.73□□□□□ -1.97
NEK4P51957 Y_RNA.287-201ENST00000364853 94 ntBASIC2.73□□□□□ -1.97
NEK4P51957 Y_RNA.310-201ENST00000365063 113 ntBASIC2.73□□□□□ -1.97
NEK4P51957 Y_RNA.456-201ENST00000384232 111 ntBASIC2.73□□□□□ -1.97
NEK4P51957 MIR1253-201ENST00000408273 105 ntBASIC2.73□□□□□ -1.97
NEK4P51957 RNU6-855P-201ENST00000410395 104 ntBASIC2.73□□□□□ -1.97
NEK4P51957 RNU6-651P-201ENST00000411040 105 ntBASIC2.73□□□□□ -1.97
NEK4P51957 RNU2-14P-201ENST00000411053 191 ntBASIC2.73□□□□□ -1.97
NEK4P51957 AC018634.1-201ENST00000437554 401 ntBASIC2.73□□□□□ -1.97
NEK4P51957 HMGN2P34-201ENST00000437647 269 ntBASIC2.73□□□□□ -1.97
NEK4P51957 AC234781.5-201ENST00000508429 271 ntBASIC2.73□□□□□ -1.97
NEK4P51957 RNU6-1041P-201ENST00000516254 102 ntBASIC2.73□□□□□ -1.97
NEK4P51957 RNU6-1337P-201ENST00000516525 95 ntBASIC2.73□□□□□ -1.97
NEK4P51957 AC009127.3-201ENST00000570531 403 ntBASIC2.73□□□□□ -1.97
NEK4P51957 MIR6766-201ENST00000622641 72 ntBASIC2.73□□□□□ -1.97
NEK4P51957 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
NEK4P51957 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.73□□□□□ -1.97
NEK4P51957 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
NEK4P51957 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.72□□□□□ -1.97
NEK4P51957 RNU6-1272P-201ENST00000362776 107 ntBASIC2.72□□□□□ -1.97
NEK4P51957 SNORD115-3-201ENST00000363100 82 ntBASIC2.72□□□□□ -1.97
NEK4P51957 SNORA5B-201ENST00000363786 132 ntBASIC2.72□□□□□ -1.97
NEK4P51957 Y_RNA.341-201ENST00000365341 102 ntBASIC2.72□□□□□ -1.97
NEK4P51957 MIR634-201ENST00000385208 97 ntBASIC2.72□□□□□ -1.97
NEK4P51957 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.72□□□□□ -1.97
NEK4P51957 SNORD2.1-201ENST00000458762 69 ntBASIC2.72□□□□□ -1.97
NEK4P51957 RPS27P22-201ENST00000478056 241 ntBASIC2.72□□□□□ -1.97
NEK4P51957 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.72□□□□□ -1.97
NEK4P51957 SNORA31.11-201ENST00000516528 139 ntBASIC2.72□□□□□ -1.97
NEK4P51957 AL137100.2-201ENST00000555786 315 ntBASIC2.72□□□□□ -1.97
NEK4P51957 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.72□□□□□ -1.97
NEK4P51957 MIR5007-201ENST00000583098 95 ntBASIC2.72□□□□□ -1.97
NEK4P51957 AL078604.3-201ENST00000615580 211 ntBASIC2.72□□□□□ -1.97
NEK4P51957 U6.73-201ENST00000619194 103 ntBASIC2.72□□□□□ -1.97
NEK4P51957 snoU18.1-201ENST00000629629 71 ntBASIC2.72□□□□□ -1.97
NEK4P51957 MIR338-201ENST00000636369 67 ntBASIC2.72□□□□□ -1.97
NEK4P51957 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
NEK4P51957 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
NEK4P51957 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.71□□□□□ -1.98
NEK4P51957 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.71□□□□□ -1.98
NEK4P51957 Y_RNA.172-201ENST00000363765 102 ntBASIC2.71□□□□□ -1.98
NEK4P51957 AL117342.1-201ENST00000404861 406 ntBASIC2.71□□□□□ -1.98
NEK4P51957 Y_RNA.590-201ENST00000410140 107 ntBASIC2.71□□□□□ -1.98
NEK4P51957 ATP5J2P3-201ENST00000451550 258 ntBASIC2.71□□□□□ -1.98
NEK4P51957 Y_RNA.637-201ENST00000459424 114 ntBASIC2.71□□□□□ -1.98
NEK4P51957 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms