Protein–RNA interactions for Protein: P49674

CSNK1E, Casein kinase I isoform epsilon, humanhuman

Known RBP Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1EP49674 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC0.85□□□□□ -2.27
CSNK1EP49674 AC023157.2-201ENST00000540596 141 ntBASIC0.85□□□□□ -2.27
CSNK1EP49674 AC011712.1-201ENST00000588959 234 ntBASIC0.85□□□□□ -2.27
CSNK1EP49674 AC006435.5-201ENST00000624486 112 ntBASIC0.85□□□□□ -2.27
CSNK1EP49674 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC0.85□□□□□ -2.27
CSNK1EP49674 AC068137.4-201ENST00000638485 296 ntBASIC0.85□□□□□ -2.27
CSNK1EP49674 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.85□□□□□ -2.27
CSNK1EP49674 Y_RNA.184-201ENST00000363884 108 ntBASIC0.84□□□□□ -2.27
CSNK1EP49674 SNORD114-24-201ENST00000365029 72 ntBASIC0.84□□□□□ -2.27
CSNK1EP49674 Y_RNA.533-201ENST00000384596 114 ntBASIC0.84□□□□□ -2.27
CSNK1EP49674 Y_RNA.559-201ENST00000384686 107 ntBASIC0.84□□□□□ -2.27
CSNK1EP49674 RNU2-64P-201ENST00000411315 191 ntBASIC0.84□□□□□ -2.27
CSNK1EP49674 AC063976.4-201ENST00000421971 163 ntBASIC0.84□□□□□ -2.27
CSNK1EP49674 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC0.84□□□□□ -2.27
CSNK1EP49674 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC0.84□□□□□ -2.27
CSNK1EP49674 MTND2P38-201ENST00000522536 667 ntBASIC0.84□□□□□ -2.27
CSNK1EP49674 AC027419.1-201ENST00000522976 328 ntBASIC0.84□□□□□ -2.27
CSNK1EP49674 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC0.84□□□□□ -2.27
CSNK1EP49674 MIR4778-201ENST00000577635 80 ntBASIC0.84□□□□□ -2.27
CSNK1EP49674 MIR4714-201ENST00000580728 77 ntBASIC0.84□□□□□ -2.27
CSNK1EP49674 MIR3942-201ENST00000585264 109 ntBASIC0.84□□□□□ -2.27
CSNK1EP49674 7SK.7-201ENST00000603504 247 ntBASIC0.84□□□□□ -2.27
CSNK1EP49674 FAM71BP1-201ENST00000604431 523 ntBASIC0.84□□□□□ -2.27
CSNK1EP49674 GHRLOS.1-201ENST00000610995 70 ntBASIC0.84□□□□□ -2.27
CSNK1EP49674 AC024614.3-201ENST00000637860 256 ntBASIC0.84□□□□□ -2.27
CSNK1EP49674 RNU6-1090P-201ENST00000364065 94 ntBASIC0.83□□□□□ -2.28
CSNK1EP49674 RNU6-596P-201ENST00000365395 98 ntBASIC0.83□□□□□ -2.28
CSNK1EP49674 SNORD116-2-201ENST00000384274 95 ntBASIC0.83□□□□□ -2.28
CSNK1EP49674 RNY1P4-201ENST00000384595 115 ntBASIC0.83□□□□□ -2.28
CSNK1EP49674 SNORD116-6-201ENST00000384711 96 ntBASIC0.83□□□□□ -2.28
CSNK1EP49674 MIR200A-201ENST00000384875 90 ntBASIC0.83□□□□□ -2.28
CSNK1EP49674 MIR216A-201ENST00000385063 110 ntBASIC0.83□□□□□ -2.28
CSNK1EP49674 MIR653-201ENST00000385279 96 ntBASIC0.83□□□□□ -2.28
CSNK1EP49674 SNORD41-201ENST00000386967 70 ntBASIC0.83□□□□□ -2.28
CSNK1EP49674 RNU6-1054P-201ENST00000411293 104 ntBASIC0.83□□□□□ -2.28
CSNK1EP49674 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC0.83□□□□□ -2.28
CSNK1EP49674 AC048334.1-201ENST00000477975 159 ntBASIC0.83□□□□□ -2.28
CSNK1EP49674 RPS27P22-201ENST00000478056 241 ntBASIC0.83□□□□□ -2.28
CSNK1EP49674 AC010469.2-201ENST00000496412 480 ntBASIC0.83□□□□□ -2.28
CSNK1EP49674 AC105758.1-201ENST00000506038 399 ntBASIC0.83□□□□□ -2.28
CSNK1EP49674 RNU7-175P-201ENST00000515915 61 ntBASIC0.83□□□□□ -2.28
CSNK1EP49674 SNORA28-201ENST00000606769 126 ntBASIC0.83□□□□□ -2.28
CSNK1EP49674 AC010999.1-201ENST00000611856 324 ntBASIC0.83□□□□□ -2.28
CSNK1EP49674 RNU6-199P-201ENST00000362954 107 ntBASIC0.82□□□□□ -2.28
CSNK1EP49674 Y_RNA.405-201ENST00000383979 100 ntBASIC0.82□□□□□ -2.28
CSNK1EP49674 Y_RNA.451-201ENST00000384200 100 ntBASIC0.82□□□□□ -2.28
CSNK1EP49674 Y_RNA.524-201ENST00000384564 100 ntBASIC0.82□□□□□ -2.28
CSNK1EP49674 Y_RNA.561-201ENST00000384694 100 ntBASIC0.82□□□□□ -2.28
CSNK1EP49674 RNU6-910P-201ENST00000390844 107 ntBASIC0.82□□□□□ -2.28
CSNK1EP49674 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.82□□□□□ -2.28
CSNK1EP49674 AC010598.1-201ENST00000510378 103 ntBASIC0.82□□□□□ -2.28
CSNK1EP49674 AC097462.1-201ENST00000514125 324 ntBASIC0.82□□□□□ -2.28
CSNK1EP49674 RNU6-1114P-201ENST00000516022 107 ntBASIC0.82□□□□□ -2.28
CSNK1EP49674 RNU6-506P-201ENST00000516553 94 ntBASIC0.82□□□□□ -2.28
CSNK1EP49674 AL590705.4-201ENST00000532209 134 ntBASIC0.82□□□□□ -2.28
CSNK1EP49674 RN7SL793P-201ENST00000583259 296 ntBASIC0.82□□□□□ -2.28
CSNK1EP49674 AC108706.1-201ENST00000611053 297 ntBASIC0.82□□□□□ -2.28
CSNK1EP49674 AC090617.10-201ENST00000624308 134 ntBASIC0.82□□□□□ -2.28
CSNK1EP49674 MIR6079-201ENST00000635807 62 ntBASIC0.82□□□□□ -2.28
CSNK1EP49674 ZNF299P-201ENST00000406845 1804 ntBASIC0.82□□□□□ -2.28
CSNK1EP49674 Y_RNA.41-201ENST00000362646 102 ntBASIC0.81□□□□□ -2.28
CSNK1EP49674 RNU6-595P-201ENST00000363944 107 ntBASIC0.81□□□□□ -2.28
CSNK1EP49674 RNU6-424P-201ENST00000384367 105 ntBASIC0.81□□□□□ -2.28
CSNK1EP49674 MTCO3P19-201ENST00000415864 321 ntBASIC0.81□□□□□ -2.28
CSNK1EP49674 AC004941.2-201ENST00000427009 228 ntBASIC0.81□□□□□ -2.28
CSNK1EP49674 CALM2P4-201ENST00000430810 426 ntBASIC0.81□□□□□ -2.28
CSNK1EP49674 MTND3P23-201ENST00000431980 347 ntBASIC0.81□□□□□ -2.28
CSNK1EP49674 MTND3P21-201ENST00000433774 331 ntBASIC0.81□□□□□ -2.28
CSNK1EP49674 Y_RNA.683-201ENST00000516508 93 ntBASIC0.81□□□□□ -2.28
CSNK1EP49674 RNA5SP168-201ENST00000516642 112 ntBASIC0.81□□□□□ -2.28
CSNK1EP49674 AC109635.3-201ENST00000529536 185 ntBASIC0.81□□□□□ -2.28
CSNK1EP49674 AC090049.2-201ENST00000550377 109 ntBASIC0.81□□□□□ -2.28
CSNK1EP49674 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC0.81□□□□□ -2.28
CSNK1EP49674 AC080078.2-201ENST00000603766 501 ntBASIC0.81□□□□□ -2.28
CSNK1EP49674 AF250324.2-201ENST00000608299 610 ntBASIC0.81□□□□□ -2.28
CSNK1EP49674 AC103591.3-201ENST00000608684 209 ntBASIC0.81□□□□□ -2.28
CSNK1EP49674 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.8□□□□□ -2.28
CSNK1EP49674 RNU6-222P-201ENST00000362438 107 ntBASIC0.8□□□□□ -2.28
CSNK1EP49674 RNU6-281P-201ENST00000384212 103 ntBASIC0.8□□□□□ -2.28
CSNK1EP49674 Y_RNA.490-201ENST00000384413 102 ntBASIC0.8□□□□□ -2.28
CSNK1EP49674 RNU6-373P-201ENST00000411247 98 ntBASIC0.8□□□□□ -2.28
CSNK1EP49674 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.8□□□□□ -2.28
CSNK1EP49674 AC245047.7-201ENST00000440265 293 ntBASIC0.8□□□□□ -2.28
CSNK1EP49674 MTCO2P7-201ENST00000446518 666 ntBASIC0.8□□□□□ -2.28
CSNK1EP49674 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.8□□□□□ -2.28
CSNK1EP49674 PDCD5P2-201ENST00000507570 312 ntBASIC0.8□□□□□ -2.28
CSNK1EP49674 RNU6-864P-201ENST00000516256 108 ntBASIC0.8□□□□□ -2.28
CSNK1EP49674 RNU6-917P-201ENST00000516294 104 ntBASIC0.8□□□□□ -2.28
CSNK1EP49674 RNU6-107P-201ENST00000516643 102 ntBASIC0.8□□□□□ -2.28
CSNK1EP49674 RNU7-172P-201ENST00000517125 64 ntBASIC0.8□□□□□ -2.28
CSNK1EP49674 AC024909.2-201ENST00000553035 286 ntBASIC0.8□□□□□ -2.28
CSNK1EP49674 MIR4273-201ENST00000582824 84 ntBASIC0.8□□□□□ -2.28
CSNK1EP49674 AC005730.3-201ENST00000583067 366 ntBASIC0.8□□□□□ -2.28
CSNK1EP49674 RNU6-1059P-201ENST00000363752 98 ntBASIC0.79□□□□□ -2.28
CSNK1EP49674 U8.16-201ENST00000391279 133 ntBASIC0.79□□□□□ -2.28
CSNK1EP49674 AL355796.1-201ENST00000406706 323 ntBASIC0.79□□□□□ -2.28
CSNK1EP49674 USMG5P1-201ENST00000425964 177 ntBASIC0.79□□□□□ -2.28
CSNK1EP49674 USP9YP16-201ENST00000430287 407 ntBASIC0.79□□□□□ -2.28
CSNK1EP49674 USP9YP23-201ENST00000455085 407 ntBASIC0.79□□□□□ -2.28
CSNK1EP49674 OR9P1P-201ENST00000496431 281 ntBASIC0.79□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 694.6 ms