Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 SNORA3B-201ENST00000391305 131 ntBASIC-1.03□□□□□ -2.57
SNCAP37840 RPS26P42-201ENST00000413485 326 ntBASIC-1.03□□□□□ -2.57
SNCAP37840 AC243428.1-201ENST00000421099 264 ntBASIC-1.03□□□□□ -2.57
SNCAP37840 RNA5SP216-201ENST00000516111 123 ntBASIC-1.03□□□□□ -2.57
SNCAP37840 RNU7-156P-201ENST00000517214 74 ntBASIC-1.03□□□□□ -2.57
SNCAP37840 MIR4636-201ENST00000582271 80 ntBASIC-1.03□□□□□ -2.57
SNCAP37840 MIR544B-201ENST00000582372 78 ntBASIC-1.03□□□□□ -2.57
SNCAP37840 AC108747.1-201ENST00000609508 535 ntBASIC-1.03□□□□□ -2.57
SNCAP37840 AL139418.1-201ENST00000613613 177 ntBASIC-1.03□□□□□ -2.57
SNCAP37840 AC078880.5-201ENST00000617845 421 ntBASIC-1.03□□□□□ -2.57
SNCAP37840 AC134878.1-201ENST00000619901 243 ntBASIC-1.03□□□□□ -2.57
SNCAP37840 AL445523.1-201ENST00000451184 1362 ntBASIC-1.04□□□□□ -2.58
SNCAP37840 RNU4-73P-201ENST00000363164 141 ntBASIC-1.04□□□□□ -2.58
SNCAP37840 RNU6-1322P-201ENST00000364309 107 ntBASIC-1.04□□□□□ -2.58
SNCAP37840 RNU6-621P-201ENST00000364752 109 ntBASIC-1.04□□□□□ -2.58
SNCAP37840 RNU6-125P-201ENST00000384505 107 ntBASIC-1.04□□□□□ -2.58
SNCAP37840 Y_RNA.552-201ENST00000384665 112 ntBASIC-1.04□□□□□ -2.58
SNCAP37840 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC-1.04□□□□□ -2.58
SNCAP37840 MTATP6P26-201ENST00000445926 662 ntBASIC-1.04□□□□□ -2.58
SNCAP37840 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC-1.04□□□□□ -2.58
SNCAP37840 MIR4677-201ENST00000584153 80 ntBASIC-1.04□□□□□ -2.58
SNCAP37840 MTATP6P2-201ENST00000603319 678 ntBASIC-1.04□□□□□ -2.58
SNCAP37840 OR4H6P-202ENST00000603819 340 ntBASIC-1.04□□□□□ -2.58
SNCAP37840 AP000907.4-201ENST00000604143 237 ntBASIC-1.04□□□□□ -2.58
SNCAP37840 AP001836.1-201ENST00000604675 523 ntBASIC-1.04□□□□□ -2.58
SNCAP37840 AC016597.2-201ENST00000613256 341 ntBASIC-1.04□□□□□ -2.58
SNCAP37840 UGP2-231ENST00000627474 264 ntTSL 5 BASIC-1.04□□□□□ -2.58
SNCAP37840 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC-1.05□□□□□ -2.58
SNCAP37840 AC073343.1-201ENST00000328239 651 ntBASIC-1.05□□□□□ -2.58
SNCAP37840 Y_RNA.370-201ENST00000365589 108 ntBASIC-1.05□□□□□ -2.58
SNCAP37840 RNU6-769P-201ENST00000384407 104 ntBASIC-1.05□□□□□ -2.58
SNCAP37840 SNORD28B-201ENST00000390993 75 ntBASIC-1.05□□□□□ -2.58
SNCAP37840 AC114491.1-201ENST00000416095 246 ntBASIC-1.05□□□□□ -2.58
SNCAP37840 AL117339.3-201ENST00000418733 162 ntBASIC-1.05□□□□□ -2.58
SNCAP37840 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC-1.05□□□□□ -2.58
SNCAP37840 BTBD7P2-201ENST00000441962 620 ntBASIC-1.05□□□□□ -2.58
SNCAP37840 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC-1.05□□□□□ -2.58
SNCAP37840 RNU7-182P-201ENST00000459009 62 ntBASIC-1.05□□□□□ -2.58
SNCAP37840 AC046134.1-201ENST00000514454 666 ntBASIC-1.05□□□□□ -2.58
SNCAP37840 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC-1.05□□□□□ -2.58
SNCAP37840 AC125232.2-201ENST00000592457 143 ntBASIC-1.05□□□□□ -2.58
SNCAP37840 AC121247.2-201ENST00000604776 136 ntBASIC-1.05□□□□□ -2.58
SNCAP37840 RNU6-462P-201ENST00000362659 105 ntBASIC-1.06□□□□□ -2.58
SNCAP37840 RNU6-354P-201ENST00000383862 107 ntBASIC-1.06□□□□□ -2.58
SNCAP37840 RNU6-610P-201ENST00000384264 107 ntBASIC-1.06□□□□□ -2.58
SNCAP37840 MIR548L-201ENST00000408303 86 ntBASIC-1.06□□□□□ -2.58
SNCAP37840 RNU6-1037P-201ENST00000459571 107 ntBASIC-1.06□□□□□ -2.58
SNCAP37840 AC107297.1-201ENST00000459991 176 ntBASIC-1.06□□□□□ -2.58
SNCAP37840 AC005178.1-201ENST00000508392 440 ntBASIC-1.06□□□□□ -2.58
SNCAP37840 AC097462.1-201ENST00000514125 324 ntBASIC-1.06□□□□□ -2.58
SNCAP37840 RNU6-469P-201ENST00000516253 101 ntBASIC-1.06□□□□□ -2.58
SNCAP37840 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC-1.06□□□□□ -2.58
SNCAP37840 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC-1.06□□□□□ -2.58
SNCAP37840 AC063944.3-201ENST00000609969 533 ntBASIC-1.06□□□□□ -2.58
SNCAP37840 Y_RNA.324-201ENST00000365165 102 ntBASIC-1.07□□□□□ -2.58
SNCAP37840 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-1.07□□□□□ -2.58
SNCAP37840 TRIM60P10Y-201ENST00000425589 751 ntBASIC-1.07□□□□□ -2.58
SNCAP37840 RNU7-73P-201ENST00000458743 63 ntBASIC-1.07□□□□□ -2.58
SNCAP37840 SNORD65B-201ENST00000459126 73 ntBASIC-1.07□□□□□ -2.58
SNCAP37840 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC-1.07□□□□□ -2.58
SNCAP37840 Y_RNA.666-201ENST00000516187 112 ntBASIC-1.07□□□□□ -2.58
SNCAP37840 RNU7-51P-201ENST00000516560 62 ntBASIC-1.07□□□□□ -2.58
SNCAP37840 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC-1.07□□□□□ -2.58
SNCAP37840 MIR548AR-201ENST00000582191 57 ntBASIC-1.07□□□□□ -2.58
SNCAP37840 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC-1.07□□□□□ -2.58
SNCAP37840 MIR4264-201ENST00000583520 66 ntBASIC-1.07□□□□□ -2.58
SNCAP37840 AP000753.3-201ENST00000604083 169 ntBASIC-1.07□□□□□ -2.58
SNCAP37840 TUG1_4.1-201ENST00000619464 181 ntBASIC-1.07□□□□□ -2.58
SNCAP37840 AC010608.3-201ENST00000625048 527 ntBASIC-1.07□□□□□ -2.58
SNCAP37840 MTND5P32-201ENST00000560711 1802 ntBASIC-1.08□□□□□ -2.58
SNCAP37840 Y_RNA.30-201ENST00000362572 97 ntBASIC-1.08□□□□□ -2.58
SNCAP37840 SNORD28-201ENST00000384706 75 ntBASIC-1.08□□□□□ -2.58
SNCAP37840 MIR224-201ENST00000384889 81 ntBASIC-1.08□□□□□ -2.58
SNCAP37840 SNORA75.1-201ENST00000391130 148 ntBASIC-1.08□□□□□ -2.58
SNCAP37840 MIR873-201ENST00000401120 77 ntBASIC-1.08□□□□□ -2.58
SNCAP37840 RNU5A-5P-201ENST00000411054 116 ntBASIC-1.08□□□□□ -2.58
SNCAP37840 MTCO1P20-201ENST00000425366 358 ntBASIC-1.08□□□□□ -2.58
SNCAP37840 EXOSC3P1-201ENST00000448649 500 ntBASIC-1.08□□□□□ -2.58
SNCAP37840 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC-1.08□□□□□ -2.58
SNCAP37840 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC-1.08□□□□□ -2.58
SNCAP37840 SNORA18.4-201ENST00000516440 124 ntBASIC-1.08□□□□□ -2.58
SNCAP37840 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC-1.08□□□□□ -2.58
SNCAP37840 AC026741.1-201ENST00000605892 482 ntBASIC-1.08□□□□□ -2.58
SNCAP37840 5S_rRNA.15-201ENST00000611169 127 ntBASIC-1.08□□□□□ -2.58
SNCAP37840 SNORA70.25-201ENST00000612741 95 ntBASIC-1.08□□□□□ -2.58
SNCAP37840 AC099786.3-201ENST00000565735 1410 ntBASIC-1.08□□□□□ -2.58
SNCAP37840 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-1.09□□□□□ -2.58
SNCAP37840 MIR101-2-201ENST00000362195 79 ntBASIC-1.09□□□□□ -2.58
SNCAP37840 RNU6-873P-201ENST00000363833 107 ntBASIC-1.09□□□□□ -2.58
SNCAP37840 RNU6-468P-201ENST00000384003 109 ntBASIC-1.09□□□□□ -2.58
SNCAP37840 RNU5A-6P-201ENST00000384136 116 ntBASIC-1.09□□□□□ -2.58
SNCAP37840 MTCO2P33-201ENST00000402100 465 ntBASIC-1.09□□□□□ -2.58
SNCAP37840 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC-1.09□□□□□ -2.58
SNCAP37840 AL390729.2-201ENST00000416137 156 ntBASIC-1.09□□□□□ -2.58
SNCAP37840 RNU7-185P-201ENST00000459215 60 ntBASIC-1.09□□□□□ -2.58
SNCAP37840 RNU6-344P-201ENST00000516635 111 ntBASIC-1.09□□□□□ -2.58
SNCAP37840 AC138749.4-201ENST00000563970 127 ntBASIC-1.09□□□□□ -2.58
SNCAP37840 AC245008.1-201ENST00000608123 476 ntBASIC-1.09□□□□□ -2.58
SNCAP37840 AC139792.3-201ENST00000623525 224 ntBASIC-1.09□□□□□ -2.58
SNCAP37840 AC006435.5-201ENST00000624486 112 ntBASIC-1.09□□□□□ -2.58
Retrieved 100 of 98,524 protein–RNA pairs in 130.7 ms