Protein–RNA interactions for Protein: P37268

FDFT1, Squalene synthase, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1P37268 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.92□□□□□ -2.26
FDFT1P37268 AC090617.3-201ENST00000573670 475 ntBASIC0.92□□□□□ -2.26
FDFT1P37268 MIR4790-201ENST00000577799 79 ntBASIC0.92□□□□□ -2.26
FDFT1P37268 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.92□□□□□ -2.26
FDFT1P37268 RNU6-199P-201ENST00000362954 107 ntBASIC0.91□□□□□ -2.26
FDFT1P37268 SNORA20B-201ENST00000384220 132 ntBASIC0.91□□□□□ -2.26
FDFT1P37268 MIR532-201ENST00000385025 91 ntBASIC0.91□□□□□ -2.26
FDFT1P37268 SNORD12-201ENST00000391002 90 ntBASIC0.91□□□□□ -2.26
FDFT1P37268 RNU11-5P-201ENST00000391216 129 ntBASIC0.91□□□□□ -2.26
FDFT1P37268 RNA5SP247-201ENST00000411181 105 ntBASIC0.91□□□□□ -2.26
FDFT1P37268 MTCO3P19-201ENST00000415864 321 ntBASIC0.91□□□□□ -2.26
FDFT1P37268 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.91□□□□□ -2.26
FDFT1P37268 UQCRBP2-201ENST00000447827 297 ntBASIC0.91□□□□□ -2.26
FDFT1P37268 SNORD5.1-201ENST00000458800 75 ntBASIC0.91□□□□□ -2.26
FDFT1P37268 HMGN1P7-201ENST00000491722 313 ntBASIC0.91□□□□□ -2.26
FDFT1P37268 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC0.91□□□□□ -2.26
FDFT1P37268 AC105758.1-201ENST00000506038 399 ntBASIC0.91□□□□□ -2.26
FDFT1P37268 AC018710.1-201ENST00000506509 158 ntBASIC0.91□□□□□ -2.26
FDFT1P37268 AC046134.1-201ENST00000514454 666 ntBASIC0.91□□□□□ -2.26
FDFT1P37268 SNORA31.2-201ENST00000516019 134 ntBASIC0.91□□□□□ -2.26
FDFT1P37268 RNA5SP168-201ENST00000516642 112 ntBASIC0.91□□□□□ -2.26
FDFT1P37268 RNU2-56P-201ENST00000516826 190 ntBASIC0.91□□□□□ -2.26
FDFT1P37268 AL121579.1-201ENST00000555129 305 ntBASIC0.91□□□□□ -2.26
FDFT1P37268 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
FDFT1P37268 RNU6-623P-201ENST00000363143 105 ntBASIC0.9□□□□□ -2.27
FDFT1P37268 Y_RNA.267-201ENST00000364679 109 ntBASIC0.9□□□□□ -2.27
FDFT1P37268 RNU6-407P-201ENST00000365280 104 ntBASIC0.9□□□□□ -2.27
FDFT1P37268 Y_RNA.453-201ENST00000384223 109 ntBASIC0.9□□□□□ -2.27
FDFT1P37268 AL355796.1-201ENST00000406706 323 ntBASIC0.9□□□□□ -2.27
FDFT1P37268 CALM2P4-201ENST00000430810 426 ntBASIC0.9□□□□□ -2.27
FDFT1P37268 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.9□□□□□ -2.27
FDFT1P37268 RNU7-87P-201ENST00000459343 62 ntBASIC0.9□□□□□ -2.27
FDFT1P37268 RNU4-49P-201ENST00000516080 140 ntBASIC0.9□□□□□ -2.27
FDFT1P37268 RNU6-947P-201ENST00000516264 106 ntBASIC0.9□□□□□ -2.27
FDFT1P37268 AC136932.1-201ENST00000574771 208 ntBASIC0.9□□□□□ -2.27
FDFT1P37268 GHRLOS.1-201ENST00000610995 70 ntBASIC0.9□□□□□ -2.27
FDFT1P37268 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.9□□□□□ -2.27
FDFT1P37268 AL133216.2-202ENST00000634512 349 ntBASIC0.9□□□□□ -2.27
FDFT1P37268 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC0.9□□□□□ -2.27
FDFT1P37268 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.9□□□□□ -2.27
FDFT1P37268 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC0.89□□□□□ -2.27
FDFT1P37268 AC073544.1-201ENST00000600110 1595 ntBASIC0.89□□□□□ -2.27
FDFT1P37268 Y_RNA.3-201ENST00000362331 103 ntBASIC0.89□□□□□ -2.27
FDFT1P37268 RNU4-79P-201ENST00000362764 141 ntBASIC0.89□□□□□ -2.27
FDFT1P37268 Y_RNA.301-201ENST00000364990 103 ntBASIC0.89□□□□□ -2.27
FDFT1P37268 RNU6-1264P-201ENST00000383891 107 ntBASIC0.89□□□□□ -2.27
FDFT1P37268 RNU6-910P-201ENST00000390844 107 ntBASIC0.89□□□□□ -2.27
FDFT1P37268 MIR190B-201ENST00000401119 79 ntBASIC0.89□□□□□ -2.27
FDFT1P37268 MTCYBP4-201ENST00000401524 249 ntBASIC0.89□□□□□ -2.27
FDFT1P37268 RNU6-1054P-201ENST00000411293 104 ntBASIC0.89□□□□□ -2.27
FDFT1P37268 AC091021.1-201ENST00000468051 388 ntBASIC0.89□□□□□ -2.27
FDFT1P37268 AC048334.1-201ENST00000477975 159 ntBASIC0.89□□□□□ -2.27
FDFT1P37268 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.89□□□□□ -2.27
FDFT1P37268 RNA5SP20-201ENST00000515976 84 ntBASIC0.89□□□□□ -2.27
FDFT1P37268 RNU6-720P-201ENST00000516363 108 ntBASIC0.89□□□□□ -2.27
FDFT1P37268 Y_RNA.682-201ENST00000516457 100 ntBASIC0.89□□□□□ -2.27
FDFT1P37268 EIF1P4-201ENST00000572664 335 ntBASIC0.89□□□□□ -2.27
FDFT1P37268 AC125232.2-201ENST00000592457 143 ntBASIC0.89□□□□□ -2.27
FDFT1P37268 AL020996.3-201ENST00000606617 222 ntBASIC0.89□□□□□ -2.27
FDFT1P37268 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC0.89□□□□□ -2.27
FDFT1P37268 RNU1-36P-201ENST00000365130 165 ntBASIC0.88□□□□□ -2.27
FDFT1P37268 Y_RNA.473-201ENST00000384333 102 ntBASIC0.88□□□□□ -2.27
FDFT1P37268 RNU6-424P-201ENST00000384367 105 ntBASIC0.88□□□□□ -2.27
FDFT1P37268 RNU6-376P-201ENST00000384731 106 ntBASIC0.88□□□□□ -2.27
FDFT1P37268 MIR499A-201ENST00000384903 122 ntBASIC0.88□□□□□ -2.27
FDFT1P37268 MIR329-1-201ENST00000385028 80 ntBASIC0.88□□□□□ -2.27
FDFT1P37268 RNU6-700P-201ENST00000391043 107 ntBASIC0.88□□□□□ -2.27
FDFT1P37268 SNORD115-47-201ENST00000391226 86 ntBASIC0.88□□□□□ -2.27
FDFT1P37268 U8.16-201ENST00000391279 133 ntBASIC0.88□□□□□ -2.27
FDFT1P37268 AC018865.2-201ENST00000423631 129 ntBASIC0.88□□□□□ -2.27
FDFT1P37268 EIF1P2-201ENST00000428233 350 ntBASIC0.88□□□□□ -2.27
FDFT1P37268 RPL39P28-201ENST00000465655 155 ntBASIC0.88□□□□□ -2.27
FDFT1P37268 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.88□□□□□ -2.27
FDFT1P37268 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.88□□□□□ -2.27
FDFT1P37268 MIR6857-201ENST00000613267 93 ntBASIC0.88□□□□□ -2.27
FDFT1P37268 U4.5-201ENST00000617137 123 ntBASIC0.88□□□□□ -2.27
FDFT1P37268 Y_RNA.2-201ENST00000362330 96 ntBASIC0.87□□□□□ -2.27
FDFT1P37268 SNORD114-2-201ENST00000363953 78 ntBASIC0.87□□□□□ -2.27
FDFT1P37268 RNU6-879P-201ENST00000364328 108 ntBASIC0.87□□□□□ -2.27
FDFT1P37268 Y_RNA.226-201ENST00000364337 114 ntBASIC0.87□□□□□ -2.27
FDFT1P37268 Y_RNA.364-201ENST00000365532 101 ntBASIC0.87□□□□□ -2.27
FDFT1P37268 MIR562-201ENST00000384894 95 ntBASIC0.87□□□□□ -2.27
FDFT1P37268 MIR653-201ENST00000385279 96 ntBASIC0.87□□□□□ -2.27
FDFT1P37268 AL451046.2-201ENST00000403074 277 ntBASIC0.87□□□□□ -2.27
FDFT1P37268 ELOCP21-201ENST00000412558 336 ntBASIC0.87□□□□□ -2.27
FDFT1P37268 AL589823.1-201ENST00000429577 183 ntBASIC0.87□□□□□ -2.27
FDFT1P37268 AC093850.1-201ENST00000454121 251 ntBASIC0.87□□□□□ -2.27
FDFT1P37268 AC092989.1-201ENST00000481235 277 ntBASIC0.87□□□□□ -2.27
FDFT1P37268 MTND5P5-201ENST00000503764 376 ntBASIC0.87□□□□□ -2.27
FDFT1P37268 AC105313.1-201ENST00000509121 353 ntBASIC0.87□□□□□ -2.27
FDFT1P37268 RNU6-322P-201ENST00000516010 103 ntBASIC0.87□□□□□ -2.27
FDFT1P37268 RNU7-12P-201ENST00000516030 62 ntBASIC0.87□□□□□ -2.27
FDFT1P37268 RNU7-28P-201ENST00000516759 62 ntBASIC0.87□□□□□ -2.27
FDFT1P37268 RNA5SP102-201ENST00000516865 106 ntBASIC0.87□□□□□ -2.27
FDFT1P37268 RNU6-341P-201ENST00000516973 96 ntBASIC0.87□□□□□ -2.27
FDFT1P37268 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.87□□□□□ -2.27
FDFT1P37268 AC090049.2-201ENST00000550377 109 ntBASIC0.87□□□□□ -2.27
FDFT1P37268 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.87□□□□□ -2.27
FDFT1P37268 MIR3684-201ENST00000579779 74 ntBASIC0.87□□□□□ -2.27
FDFT1P37268 FAM71BP1-201ENST00000604431 523 ntBASIC0.87□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 156.6 ms