Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 MIR520A-201ENST00000384862 85 ntBASIC1.17□□□□□ -2.22
HOXA9P31269 MIR520E-201ENST00000384867 87 ntBASIC1.17□□□□□ -2.22
HOXA9P31269 MIR1267-201ENST00000408723 78 ntBASIC1.17□□□□□ -2.22
HOXA9P31269 Y_RNA.646-201ENST00000410980 101 ntBASIC1.17□□□□□ -2.22
HOXA9P31269 RNU6-1001P-201ENST00000411265 100 ntBASIC1.17□□□□□ -2.22
HOXA9P31269 ELOCP21-201ENST00000412558 336 ntBASIC1.17□□□□□ -2.22
HOXA9P31269 MTCYBP10-201ENST00000424905 650 ntBASIC1.17□□□□□ -2.22
HOXA9P31269 HSPE1P9-201ENST00000440046 311 ntBASIC1.17□□□□□ -2.22
HOXA9P31269 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.17□□□□□ -2.22
HOXA9P31269 HMGN1P13-201ENST00000505795 138 ntBASIC1.17□□□□□ -2.22
HOXA9P31269 AC011604.1-201ENST00000545978 196 ntBASIC1.17□□□□□ -2.22
HOXA9P31269 AC093023.1-201ENST00000547375 507 ntBASIC1.17□□□□□ -2.22
HOXA9P31269 AC090617.3-201ENST00000573670 475 ntBASIC1.17□□□□□ -2.22
HOXA9P31269 SNORA77B-201ENST00000578179 125 ntBASIC1.17□□□□□ -2.22
HOXA9P31269 FAM106DP-201ENST00000586416 501 ntBASIC1.17□□□□□ -2.22
HOXA9P31269 AC092794.2-201ENST00000620933 563 ntBASIC1.17□□□□□ -2.22
HOXA9P31269 AC095038.3-201ENST00000634439 195 ntBASIC1.17□□□□□ -2.22
HOXA9P31269 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.17□□□□□ -2.22
HOXA9P31269 RNA5SP361-201ENST00000362686 118 ntBASIC1.16□□□□□ -2.22
HOXA9P31269 SNORD114-27-201ENST00000363766 70 ntBASIC1.16□□□□□ -2.22
HOXA9P31269 RNU6-99P-201ENST00000364721 107 ntBASIC1.16□□□□□ -2.22
HOXA9P31269 RNU6-1240P-201ENST00000365155 104 ntBASIC1.16□□□□□ -2.22
HOXA9P31269 RNU6-310P-201ENST00000384655 107 ntBASIC1.16□□□□□ -2.22
HOXA9P31269 RNU6-700P-201ENST00000391043 107 ntBASIC1.16□□□□□ -2.22
HOXA9P31269 RNU6-370P-201ENST00000411008 104 ntBASIC1.16□□□□□ -2.22
HOXA9P31269 AL591704.2-201ENST00000421658 181 ntBASIC1.16□□□□□ -2.22
HOXA9P31269 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.16□□□□□ -2.22
HOXA9P31269 MTND4P18-201ENST00000447010 465 ntBASIC1.16□□□□□ -2.22
HOXA9P31269 AC074290.1-201ENST00000448883 135 ntBASIC1.16□□□□□ -2.22
HOXA9P31269 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.16□□□□□ -2.22
HOXA9P31269 RNU7-87P-201ENST00000459343 62 ntBASIC1.16□□□□□ -2.22
HOXA9P31269 RPL17P19-201ENST00000489069 552 ntBASIC1.16□□□□□ -2.22
HOXA9P31269 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.16□□□□□ -2.22
HOXA9P31269 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.16□□□□□ -2.22
HOXA9P31269 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
HOXA9P31269 MIR1244-1-201ENST00000612829 85 ntBASIC1.16□□□□□ -2.22
HOXA9P31269 MIR1244-3-201ENST00000635744 85 ntBASIC1.16□□□□□ -2.22
HOXA9P31269 MIR1244-2-201ENST00000636449 85 ntBASIC1.16□□□□□ -2.22
HOXA9P31269 MIR1244-4-202ENST00000636813 85 ntBASIC1.16□□□□□ -2.22
HOXA9P31269 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.16□□□□□ -2.22
HOXA9P31269 SNORA4.2-201ENST00000365313 147 ntBASIC1.15□□□□□ -2.23
HOXA9P31269 Y_RNA.358-201ENST00000365491 99 ntBASIC1.15□□□□□ -2.23
HOXA9P31269 RNU6-318P-201ENST00000384283 103 ntBASIC1.15□□□□□ -2.23
HOXA9P31269 RNU6-360P-201ENST00000390944 104 ntBASIC1.15□□□□□ -2.23
HOXA9P31269 AL135790.2-201ENST00000437701 267 ntBASIC1.15□□□□□ -2.23
HOXA9P31269 AL606517.2-201ENST00000442855 241 ntBASIC1.15□□□□□ -2.23
HOXA9P31269 AC073910.1-201ENST00000445047 438 ntBASIC1.15□□□□□ -2.23
HOXA9P31269 MTCO3P10-201ENST00000455912 772 ntBASIC1.15□□□□□ -2.23
HOXA9P31269 Y_RNA.635-201ENST00000459041 101 ntBASIC1.15□□□□□ -2.23
HOXA9P31269 RPS26P55-201ENST00000471178 356 ntBASIC1.15□□□□□ -2.23
HOXA9P31269 RPL26P26-201ENST00000480251 434 ntBASIC1.15□□□□□ -2.23
HOXA9P31269 AL163195.1-201ENST00000496941 348 ntBASIC1.15□□□□□ -2.23
HOXA9P31269 RNU6-277P-201ENST00000516272 106 ntBASIC1.15□□□□□ -2.23
HOXA9P31269 Y_RNA.683-201ENST00000516508 93 ntBASIC1.15□□□□□ -2.23
HOXA9P31269 RNU6-113P-201ENST00000516653 101 ntBASIC1.15□□□□□ -2.23
HOXA9P31269 AC005899.2-201ENST00000584353 90 ntBASIC1.15□□□□□ -2.23
HOXA9P31269 AC022709.1-201ENST00000615967 87 ntBASIC1.15□□□□□ -2.23
HOXA9P31269 AC087588.2-201ENST00000617667 426 ntBASIC1.15□□□□□ -2.23
HOXA9P31269 MIR6734-201ENST00000621166 68 ntBASIC1.15□□□□□ -2.23
HOXA9P31269 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.15□□□□□ -2.23
HOXA9P31269 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.14□□□□□ -2.23
HOXA9P31269 SNORA72.1-201ENST00000363485 129 ntBASIC1.14□□□□□ -2.23
HOXA9P31269 Y_RNA.142-201ENST00000363491 102 ntBASIC1.14□□□□□ -2.23
HOXA9P31269 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC1.14□□□□□ -2.23
HOXA9P31269 MIR1253-201ENST00000408273 105 ntBASIC1.14□□□□□ -2.23
HOXA9P31269 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.14□□□□□ -2.23
HOXA9P31269 AC092423.1-201ENST00000430165 186 ntBASIC1.14□□□□□ -2.23
HOXA9P31269 SNORD65B-201ENST00000459126 73 ntBASIC1.14□□□□□ -2.23
HOXA9P31269 AC091951.2-201ENST00000500762 203 ntBASIC1.14□□□□□ -2.23
HOXA9P31269 RNU6-1146P-201ENST00000516282 102 ntBASIC1.14□□□□□ -2.23
HOXA9P31269 RNU7-128P-201ENST00000517247 62 ntBASIC1.14□□□□□ -2.23
HOXA9P31269 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.14□□□□□ -2.23
HOXA9P31269 AL137100.2-201ENST00000555786 315 ntBASIC1.14□□□□□ -2.23
HOXA9P31269 AC004584.2-201ENST00000570407 410 ntBASIC1.14□□□□□ -2.23
HOXA9P31269 AC005730.3-201ENST00000583067 366 ntBASIC1.14□□□□□ -2.23
HOXA9P31269 MIR151B-201ENST00000584249 96 ntBASIC1.14□□□□□ -2.23
HOXA9P31269 AC113139.1-201ENST00000605049 239 ntBASIC1.14□□□□□ -2.23
HOXA9P31269 MIR6788-201ENST00000618842 66 ntBASIC1.14□□□□□ -2.23
HOXA9P31269 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
HOXA9P31269 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
HOXA9P31269 RNU5F-3P-201ENST00000363767 117 ntBASIC1.13□□□□□ -2.23
HOXA9P31269 RNU6-890P-201ENST00000384121 107 ntBASIC1.13□□□□□ -2.23
HOXA9P31269 SNORA75.6-201ENST00000391318 127 ntBASIC1.13□□□□□ -2.23
HOXA9P31269 RNU2-7P-201ENST00000410794 178 ntBASIC1.13□□□□□ -2.23
HOXA9P31269 AC008134.1-201ENST00000420943 193 ntBASIC1.13□□□□□ -2.23
HOXA9P31269 RPL23AP50-201ENST00000434149 455 ntBASIC1.13□□□□□ -2.23
HOXA9P31269 AC005002.2-201ENST00000438228 269 ntBASIC1.13□□□□□ -2.23
HOXA9P31269 RPS27P1-201ENST00000450552 247 ntBASIC1.13□□□□□ -2.23
HOXA9P31269 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.13□□□□□ -2.23
HOXA9P31269 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.13□□□□□ -2.23
HOXA9P31269 RN7SKP179-201ENST00000516126 217 ntBASIC1.13□□□□□ -2.23
HOXA9P31269 RNU4ATAC7P-201ENST00000516280 125 ntBASIC1.13□□□□□ -2.23
HOXA9P31269 AC022868.1-201ENST00000517767 391 ntBASIC1.13□□□□□ -2.23
HOXA9P31269 AP002001.1-203ENST00000534002 267 ntBASIC1.13□□□□□ -2.23
HOXA9P31269 MIR5690-201ENST00000583739 73 ntBASIC1.13□□□□□ -2.23
HOXA9P31269 UBE2V2P2-201ENST00000587677 504 ntBASIC1.13□□□□□ -2.23
HOXA9P31269 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.13□□□□□ -2.23
HOXA9P31269 SNORD33-201ENST00000362761 85 ntBASIC1.12□□□□□ -2.23
HOXA9P31269 RNU6-879P-201ENST00000364328 108 ntBASIC1.12□□□□□ -2.23
HOXA9P31269 Y_RNA.354-201ENST00000365448 111 ntBASIC1.12□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms