Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 MIR1294-201ENST00000408503 142 ntBASIC1.76□□□□□ -2.13
SHC1P29353 RNA5SP489-201ENST00000410986 109 ntBASIC1.76□□□□□ -2.13
SHC1P29353 AC096920.1-201ENST00000423991 241 ntBASIC1.76□□□□□ -2.13
SHC1P29353 AC139712.2-201ENST00000424302 339 ntBASIC1.76□□□□□ -2.13
SHC1P29353 AC108059.2-201ENST00000434626 151 ntBASIC1.76□□□□□ -2.13
SHC1P29353 AL161788.1-201ENST00000441805 169 ntBASIC1.76□□□□□ -2.13
SHC1P29353 AC009238.1-201ENST00000442165 424 ntBASIC1.76□□□□□ -2.13
SHC1P29353 AC009237.6-201ENST00000446969 424 ntBASIC1.76□□□□□ -2.13
SHC1P29353 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.76□□□□□ -2.13
SHC1P29353 RNU6-388P-201ENST00000517012 105 ntBASIC1.76□□□□□ -2.13
SHC1P29353 RNU6-389P-201ENST00000517048 105 ntBASIC1.76□□□□□ -2.13
SHC1P29353 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.76□□□□□ -2.13
SHC1P29353 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.76□□□□□ -2.13
SHC1P29353 AC104984.5-201ENST00000586878 94 ntBASIC1.76□□□□□ -2.13
SHC1P29353 AC078899.2-201ENST00000595282 212 ntBASIC1.76□□□□□ -2.13
SHC1P29353 AC022441.3-201ENST00000605737 136 ntBASIC1.76□□□□□ -2.13
SHC1P29353 SNORD113-5-201ENST00000607261 78 ntBASIC1.76□□□□□ -2.13
SHC1P29353 SNORD11B-201ENST00000607707 90 ntBASIC1.76□□□□□ -2.13
SHC1P29353 AC127459.3-201ENST00000624328 466 ntBASIC1.76□□□□□ -2.13
SHC1P29353 AC068205.3-201ENST00000636385 468 ntBASIC1.76□□□□□ -2.13
SHC1P29353 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.76□□□□□ -2.13
SHC1P29353 AC092881.1-201ENST00000638218 2733 ntBASIC1.75□□□□□ -2.13
SHC1P29353 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
SHC1P29353 AL359851.1-201ENST00000569460 4997 ntBASIC1.75□□□□□ -2.13
SHC1P29353 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.75□□□□□ -2.13
SHC1P29353 MIR335-201ENST00000362173 94 ntBASIC1.75□□□□□ -2.13
SHC1P29353 Y_RNA.60-201ENST00000362831 98 ntBASIC1.75□□□□□ -2.13
SHC1P29353 RNU1-23P-201ENST00000363361 144 ntBASIC1.75□□□□□ -2.13
SHC1P29353 RNU6-234P-201ENST00000365229 104 ntBASIC1.75□□□□□ -2.13
SHC1P29353 RNU2-48P-201ENST00000410694 191 ntBASIC1.75□□□□□ -2.13
SHC1P29353 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.75□□□□□ -2.13
SHC1P29353 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.75□□□□□ -2.13
SHC1P29353 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.75□□□□□ -2.13
SHC1P29353 AC003989.2-201ENST00000440224 169 ntBASIC1.75□□□□□ -2.13
SHC1P29353 MTND4LP30-201ENST00000454092 297 ntBASIC1.75□□□□□ -2.13
SHC1P29353 RNU7-14P-201ENST00000459331 62 ntBASIC1.75□□□□□ -2.13
SHC1P29353 RPL39P38-201ENST00000467018 153 ntBASIC1.75□□□□□ -2.13
SHC1P29353 RNU5F-4P-201ENST00000516581 114 ntBASIC1.75□□□□□ -2.13
SHC1P29353 RNU6-107P-201ENST00000516643 102 ntBASIC1.75□□□□□ -2.13
SHC1P29353 SNORA48.11-201ENST00000517015 89 ntBASIC1.75□□□□□ -2.13
SHC1P29353 SNORA31.25-201ENST00000517242 134 ntBASIC1.75□□□□□ -2.13
SHC1P29353 AC018630.3-201ENST00000542637 96 ntBASIC1.75□□□□□ -2.13
SHC1P29353 MIR3126-201ENST00000577443 74 ntBASIC1.75□□□□□ -2.13
SHC1P29353 MIR4643-201ENST00000577473 78 ntBASIC1.75□□□□□ -2.13
SHC1P29353 AC008749.1-201ENST00000597650 306 ntBASIC1.75□□□□□ -2.13
SHC1P29353 AL109918.3-201ENST00000603072 338 ntBASIC1.75□□□□□ -2.13
SHC1P29353 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.75□□□□□ -2.13
SHC1P29353 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.75□□□□□ -2.13
SHC1P29353 MIR3674-201ENST00000636576 68 ntBASIC1.75□□□□□ -2.13
SHC1P29353 U6.104-201ENST00000637979 90 ntBASIC1.75□□□□□ -2.13
SHC1P29353 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
SHC1P29353 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
SHC1P29353 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.74□□□□□ -2.13
SHC1P29353 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.74□□□□□ -2.13
SHC1P29353 MIR410-201ENST00000362222 80 ntBASIC1.74□□□□□ -2.13
SHC1P29353 RNU4-90P-201ENST00000362773 141 ntBASIC1.74□□□□□ -2.13
SHC1P29353 RNU6-1305P-201ENST00000364353 104 ntBASIC1.74□□□□□ -2.13
SHC1P29353 SNORA16B-201ENST00000364674 135 ntBASIC1.74□□□□□ -2.13
SHC1P29353 Y_RNA.331-201ENST00000365267 102 ntBASIC1.74□□□□□ -2.13
SHC1P29353 RNU6-1318P-201ENST00000365389 103 ntBASIC1.74□□□□□ -2.13
SHC1P29353 Y_RNA.539-201ENST00000384635 107 ntBASIC1.74□□□□□ -2.13
SHC1P29353 RNA5SP475-201ENST00000410568 110 ntBASIC1.74□□□□□ -2.13
SHC1P29353 RNU2-40P-201ENST00000410833 196 ntBASIC1.74□□□□□ -2.13
SHC1P29353 EDDM3CP-201ENST00000415977 425 ntBASIC1.74□□□□□ -2.13
SHC1P29353 AC055731.1-201ENST00000474387 401 ntBASIC1.74□□□□□ -2.13
SHC1P29353 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.74□□□□□ -2.13
SHC1P29353 SERF1AP1-201ENST00000514575 187 ntBASIC1.74□□□□□ -2.13
SHC1P29353 AC005357.1-201ENST00000588399 301 ntBASIC1.74□□□□□ -2.13
SHC1P29353 MIR6715A-201ENST00000615929 79 ntBASIC1.74□□□□□ -2.13
SHC1P29353 AC078938.1-201ENST00000620993 318 ntBASIC1.74□□□□□ -2.13
SHC1P29353 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
SHC1P29353 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
SHC1P29353 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.74□□□□□ -2.13
SHC1P29353 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.73□□□□□ -2.13
SHC1P29353 RNU6-290P-201ENST00000365212 101 ntBASIC1.73□□□□□ -2.13
SHC1P29353 RNU6-1264P-201ENST00000383891 107 ntBASIC1.73□□□□□ -2.13
SHC1P29353 RNU6-546P-201ENST00000383991 107 ntBASIC1.73□□□□□ -2.13
SHC1P29353 RNU6-21P-201ENST00000384710 107 ntBASIC1.73□□□□□ -2.13
SHC1P29353 RNU6-907P-201ENST00000390924 102 ntBASIC1.73□□□□□ -2.13
SHC1P29353 AL603910.2-201ENST00000407268 136 ntBASIC1.73□□□□□ -2.13
SHC1P29353 MIR1289-2-201ENST00000408360 111 ntBASIC1.73□□□□□ -2.13
SHC1P29353 RNU6ATAC23P-201ENST00000408448 123 ntBASIC1.73□□□□□ -2.13
SHC1P29353 RNU2-32P-201ENST00000411193 191 ntBASIC1.73□□□□□ -2.13
SHC1P29353 HMGN2P19-201ENST00000425149 265 ntBASIC1.73□□□□□ -2.13
SHC1P29353 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.73□□□□□ -2.13
SHC1P29353 HMGN2P18-201ENST00000450680 270 ntBASIC1.73□□□□□ -2.13
SHC1P29353 HMGN2P9-201ENST00000476875 229 ntBASIC1.73□□□□□ -2.13
SHC1P29353 RNU6-1023P-201ENST00000516137 106 ntBASIC1.73□□□□□ -2.13
SHC1P29353 RNA5SP137-201ENST00000516833 135 ntBASIC1.73□□□□□ -2.13
SHC1P29353 RNU2-12P-201ENST00000517216 168 ntBASIC1.73□□□□□ -2.13
SHC1P29353 RNU2-19P-201ENST00000517288 84 ntBASIC1.73□□□□□ -2.13
SHC1P29353 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.73□□□□□ -2.13
SHC1P29353 MIR4529-201ENST00000578110 78 ntBASIC1.73□□□□□ -2.13
SHC1P29353 AC007229.1-201ENST00000590455 412 ntBASIC1.73□□□□□ -2.13
SHC1P29353 AC012493.3-201ENST00000604494 112 ntBASIC1.73□□□□□ -2.13
SHC1P29353 RPL17P51-201ENST00000605218 238 ntBASIC1.73□□□□□ -2.13
SHC1P29353 AL590240.4-201ENST00000616908 390 ntBASIC1.73□□□□□ -2.13
SHC1P29353 AC006001.4-201ENST00000622243 395 ntBASIC1.73□□□□□ -2.13
SHC1P29353 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
SHC1P29353 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.73□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms