Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 RNA5SP125-201ENST00000364843 120 ntBASIC1.08□□□□□ -2.24
COL5A1P20908 Y_RNA.358-201ENST00000365491 99 ntBASIC1.08□□□□□ -2.24
COL5A1P20908 RNU6-281P-201ENST00000384212 103 ntBASIC1.08□□□□□ -2.24
COL5A1P20908 RNU6-1145P-201ENST00000384246 107 ntBASIC1.08□□□□□ -2.24
COL5A1P20908 MIR29B2-201ENST00000385055 81 ntBASIC1.08□□□□□ -2.24
COL5A1P20908 MIR153-2-201ENST00000385225 87 ntBASIC1.08□□□□□ -2.24
COL5A1P20908 RPS26P42-201ENST00000413485 326 ntBASIC1.08□□□□□ -2.24
COL5A1P20908 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.08□□□□□ -2.24
COL5A1P20908 EIF4EP4-201ENST00000424916 578 ntBASIC1.08□□□□□ -2.24
COL5A1P20908 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.08□□□□□ -2.24
COL5A1P20908 AL161788.1-201ENST00000441805 169 ntBASIC1.08□□□□□ -2.24
COL5A1P20908 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.08□□□□□ -2.24
COL5A1P20908 AC087477.1-201ENST00000465747 340 ntBASIC1.08□□□□□ -2.24
COL5A1P20908 AC022493.2-201ENST00000506122 481 ntBASIC1.08□□□□□ -2.24
COL5A1P20908 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.08□□□□□ -2.24
COL5A1P20908 AC091874.1-201ENST00000511402 339 ntBASIC1.08□□□□□ -2.24
COL5A1P20908 SNORA25.14-201ENST00000516481 132 ntBASIC1.08□□□□□ -2.24
COL5A1P20908 AC040926.1-201ENST00000530195 238 ntBASIC1.08□□□□□ -2.24
COL5A1P20908 AC079598.5-201ENST00000547460 117 ntBASIC1.08□□□□□ -2.24
COL5A1P20908 AC113195.1-201ENST00000579952 141 ntBASIC1.08□□□□□ -2.24
COL5A1P20908 PCGEM1.1-201ENST00000613431 131 ntBASIC1.08□□□□□ -2.24
COL5A1P20908 AC007742.2-201ENST00000618226 398 ntBASIC1.08□□□□□ -2.24
COL5A1P20908 RNU4-15P-201ENST00000362613 141 ntBASIC1.08□□□□□ -2.24
COL5A1P20908 RNU6-639P-201ENST00000384074 107 ntBASIC1.08□□□□□ -2.24
COL5A1P20908 Y_RNA.471-201ENST00000384312 102 ntBASIC1.08□□□□□ -2.24
COL5A1P20908 MIR193B-201ENST00000384907 83 ntBASIC1.08□□□□□ -2.24
COL5A1P20908 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
COL5A1P20908 AL133475.1-201ENST00000404414 305 ntBASIC1.08□□□□□ -2.24
COL5A1P20908 AC114482.1-201ENST00000418010 247 ntBASIC1.08□□□□□ -2.24
COL5A1P20908 RPL21P38-201ENST00000418090 167 ntBASIC1.08□□□□□ -2.24
COL5A1P20908 AC007215.1-201ENST00000464893 276 ntBASIC1.08□□□□□ -2.24
COL5A1P20908 RNU6-1012P-201ENST00000516606 109 ntBASIC1.08□□□□□ -2.24
COL5A1P20908 AL355297.2-201ENST00000604792 129 ntBASIC1.08□□□□□ -2.24
COL5A1P20908 AL034555.1-201ENST00000604816 211 ntBASIC1.08□□□□□ -2.24
COL5A1P20908 AC100812.1-201ENST00000607622 580 ntBASIC1.08□□□□□ -2.24
COL5A1P20908 MIR4272-201ENST00000635924 64 ntBASIC1.08□□□□□ -2.24
COL5A1P20908 AC091812.1-201ENST00000432235 1948 ntBASIC1.07□□□□□ -2.24
COL5A1P20908 BX322639.1-202ENST00000423987 2213 ntBASIC1.07□□□□□ -2.24
COL5A1P20908 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.07□□□□□ -2.24
COL5A1P20908 RNU6-212P-201ENST00000362642 104 ntBASIC1.07□□□□□ -2.24
COL5A1P20908 Y_RNA.179-201ENST00000363844 90 ntBASIC1.07□□□□□ -2.24
COL5A1P20908 SNORD14.1-201ENST00000365609 90 ntBASIC1.07□□□□□ -2.24
COL5A1P20908 Y_RNA.422-201ENST00000384054 114 ntBASIC1.07□□□□□ -2.24
COL5A1P20908 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
COL5A1P20908 RNU6-823P-201ENST00000391042 103 ntBASIC1.07□□□□□ -2.24
COL5A1P20908 snosnR66.1-201ENST00000391095 99 ntBASIC1.07□□□□□ -2.24
COL5A1P20908 RNU6-955P-201ENST00000410497 104 ntBASIC1.07□□□□□ -2.24
COL5A1P20908 EDDM3CP-201ENST00000415977 425 ntBASIC1.07□□□□□ -2.24
COL5A1P20908 AC113618.1-201ENST00000416747 285 ntBASIC1.07□□□□□ -2.24
COL5A1P20908 AL590556.1-201ENST00000423231 483 ntBASIC1.07□□□□□ -2.24
COL5A1P20908 AC012306.1-201ENST00000423267 114 ntBASIC1.07□□□□□ -2.24
COL5A1P20908 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.07□□□□□ -2.24
COL5A1P20908 CHEK2P4-201ENST00000450340 246 ntBASIC1.07□□□□□ -2.24
COL5A1P20908 AC107032.1-201ENST00000485945 480 ntBASIC1.07□□□□□ -2.24
COL5A1P20908 AC093023.1-201ENST00000547375 507 ntBASIC1.07□□□□□ -2.24
COL5A1P20908 EIF4A1P12-201ENST00000551910 141 ntBASIC1.07□□□□□ -2.24
COL5A1P20908 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.07□□□□□ -2.24
COL5A1P20908 MIR1273G-201ENST00000577677 100 ntBASIC1.07□□□□□ -2.24
COL5A1P20908 MIR4680-201ENST00000580906 66 ntBASIC1.07□□□□□ -2.24
COL5A1P20908 RPL30P11-203ENST00000598995 310 ntBASIC1.07□□□□□ -2.24
COL5A1P20908 AC069294.1-201ENST00000608397 350 ntBASIC1.07□□□□□ -2.24
COL5A1P20908 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
COL5A1P20908 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.06□□□□□ -2.24
COL5A1P20908 RNU6-874P-201ENST00000362390 105 ntBASIC1.06□□□□□ -2.24
COL5A1P20908 RNU6-655P-201ENST00000362858 107 ntBASIC1.06□□□□□ -2.24
COL5A1P20908 RNU4-38P-201ENST00000364472 129 ntBASIC1.06□□□□□ -2.24
COL5A1P20908 Y_RNA.364-201ENST00000365532 101 ntBASIC1.06□□□□□ -2.24
COL5A1P20908 RNU6-438P-201ENST00000365561 103 ntBASIC1.06□□□□□ -2.24
COL5A1P20908 SNORA70.7-201ENST00000384159 133 ntBASIC1.06□□□□□ -2.24
COL5A1P20908 Y_RNA.557-201ENST00000384680 107 ntBASIC1.06□□□□□ -2.24
COL5A1P20908 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
COL5A1P20908 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
COL5A1P20908 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.06□□□□□ -2.24
COL5A1P20908 NDUFB4P10-201ENST00000452541 359 ntBASIC1.06□□□□□ -2.24
COL5A1P20908 MTND5P22-201ENST00000458380 195 ntBASIC1.06□□□□□ -2.24
COL5A1P20908 U8.22-201ENST00000459141 133 ntBASIC1.06□□□□□ -2.24
COL5A1P20908 RNU6-1114P-201ENST00000516022 107 ntBASIC1.06□□□□□ -2.24
COL5A1P20908 RNU5F-4P-201ENST00000516581 114 ntBASIC1.06□□□□□ -2.24
COL5A1P20908 AC022616.8-201ENST00000533569 253 ntBASIC1.06□□□□□ -2.24
COL5A1P20908 AL021879.1-201ENST00000611756 288 ntBASIC1.06□□□□□ -2.24
COL5A1P20908 U2.1-201ENST00000618978 145 ntBASIC1.06□□□□□ -2.24
COL5A1P20908 AC138305.3-201ENST00000624988 240 ntBASIC1.06□□□□□ -2.24
COL5A1P20908 ZNF702P-202ENST00000434269 1966 ntBASIC1.06□□□□□ -2.24
COL5A1P20908 RNU6-961P-201ENST00000363893 105 ntBASIC1.05□□□□□ -2.24
COL5A1P20908 RNU4-9P-201ENST00000364951 139 ntBASIC1.05□□□□□ -2.24
COL5A1P20908 Y_RNA.405-201ENST00000383979 100 ntBASIC1.05□□□□□ -2.24
COL5A1P20908 RNU6-968P-201ENST00000384076 107 ntBASIC1.05□□□□□ -2.24
COL5A1P20908 Y_RNA.433-201ENST00000384089 102 ntBASIC1.05□□□□□ -2.24
COL5A1P20908 Y_RNA.451-201ENST00000384200 100 ntBASIC1.05□□□□□ -2.24
COL5A1P20908 RNU6-611P-201ENST00000384276 104 ntBASIC1.05□□□□□ -2.24
COL5A1P20908 Y_RNA.524-201ENST00000384564 100 ntBASIC1.05□□□□□ -2.24
COL5A1P20908 Y_RNA.561-201ENST00000384694 100 ntBASIC1.05□□□□□ -2.24
COL5A1P20908 MIR150-201ENST00000385048 84 ntBASIC1.05□□□□□ -2.24
COL5A1P20908 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.05□□□□□ -2.24
COL5A1P20908 AC015911.1-201ENST00000495111 156 ntBASIC1.05□□□□□ -2.24
COL5A1P20908 AC023141.11-201ENST00000508864 202 ntBASIC1.05□□□□□ -2.24
COL5A1P20908 RNU6ATAC13P-201ENST00000516152 131 ntBASIC1.05□□□□□ -2.24
COL5A1P20908 RNU6-1046P-201ENST00000516538 107 ntBASIC1.05□□□□□ -2.24
COL5A1P20908 RNU6-344P-201ENST00000516635 111 ntBASIC1.05□□□□□ -2.24
COL5A1P20908 RNU6-635P-201ENST00000516651 102 ntBASIC1.05□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms