Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 PCNPP5-201ENST00000452246 481 ntBASIC-2.42□□□□□ -2.8
TOP2AP11388 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC-2.42□□□□□ -2.8
TOP2AP11388 Y_RNA.190-201ENST00000363964 101 ntBASIC-2.42□□□□□ -2.8
TOP2AP11388 RNU6-205P-201ENST00000390858 107 ntBASIC-2.42□□□□□ -2.8
TOP2AP11388 TRIM60P5Y-201ENST00000413946 574 ntBASIC-2.42□□□□□ -2.8
TOP2AP11388 AL353572.1-201ENST00000442490 417 ntBASIC-2.42□□□□□ -2.8
TOP2AP11388 RPL30P15-201ENST00000457129 321 ntBASIC-2.42□□□□□ -2.8
TOP2AP11388 RNU2-34P-201ENST00000516534 121 ntBASIC-2.42□□□□□ -2.8
TOP2AP11388 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC-2.42□□□□□ -2.8
TOP2AP11388 AC064872.1-201ENST00000604823 1072 ntBASIC-2.42□□□□□ -2.8
TOP2AP11388 AL008636.1-201ENST00000625038 1018 ntBASIC-2.42□□□□□ -2.8
TOP2AP11388 CDR1-202ENST00000625883 1485 ntBASIC-2.43□□□□□ -2.8
TOP2AP11388 Y_RNA.117-201ENST00000363294 101 ntBASIC-2.43□□□□□ -2.8
TOP2AP11388 MIR1253-201ENST00000408273 105 ntBASIC-2.43□□□□□ -2.8
TOP2AP11388 RNU6-475P-201ENST00000516073 104 ntBASIC-2.43□□□□□ -2.8
TOP2AP11388 Y_RNA.715-201ENST00000517082 110 ntBASIC-2.43□□□□□ -2.8
TOP2AP11388 AC009902.1-201ENST00000519351 183 ntBASIC-2.43□□□□□ -2.8
TOP2AP11388 AC068587.4-201ENST00000533893 186 ntBASIC-2.43□□□□□ -2.8
TOP2AP11388 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC-2.43□□□□□ -2.8
TOP2AP11388 AL355375.2-201ENST00000574825 175 ntBASIC-2.43□□□□□ -2.8
TOP2AP11388 MIR4520-1-201ENST00000582609 70 ntBASIC-2.43□□□□□ -2.8
TOP2AP11388 POLR3GP2-201ENST00000588366 668 ntBASIC-2.43□□□□□ -2.8
TOP2AP11388 SNORA36A-201ENST00000384221 132 ntBASIC-2.44□□□□□ -2.8
TOP2AP11388 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC-2.44□□□□□ -2.8
TOP2AP11388 BX276092.1-201ENST00000427368 251 ntBASIC-2.44□□□□□ -2.8
TOP2AP11388 RNU6-287P-201ENST00000516230 98 ntBASIC-2.44□□□□□ -2.8
TOP2AP11388 RNU7-43P-201ENST00000516554 64 ntBASIC-2.44□□□□□ -2.8
TOP2AP11388 SNORA31.14-201ENST00000516728 116 ntBASIC-2.44□□□□□ -2.8
TOP2AP11388 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC-2.44□□□□□ -2.8
TOP2AP11388 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC-2.44□□□□□ -2.8
TOP2AP11388 MIR4251-201ENST00000635819 61 ntBASIC-2.44□□□□□ -2.8
TOP2AP11388 Y_RNA.145-201ENST00000363527 102 ntBASIC-2.45□□□□□ -2.8
TOP2AP11388 Y_RNA.265-201ENST00000364677 108 ntBASIC-2.45□□□□□ -2.8
TOP2AP11388 SNORD74.6-201ENST00000364796 70 ntBASIC-2.45□□□□□ -2.8
TOP2AP11388 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC-2.45□□□□□ -2.8
TOP2AP11388 RNU5E-9P-201ENST00000411164 104 ntBASIC-2.45□□□□□ -2.8
TOP2AP11388 MTND1P33-201ENST00000446251 917 ntBASIC-2.45□□□□□ -2.8
TOP2AP11388 AP000753.3-201ENST00000604083 169 ntBASIC-2.45□□□□□ -2.8
TOP2AP11388 Y_RNA.174-201ENST00000363781 105 ntBASIC-2.46□□□□□ -2.8
TOP2AP11388 MIR891A-201ENST00000401237 79 ntBASIC-2.46□□□□□ -2.8
TOP2AP11388 AC016831.2-201ENST00000417179 352 ntBASIC-2.46□□□□□ -2.8
TOP2AP11388 USP9YP12-201ENST00000450481 570 ntBASIC-2.46□□□□□ -2.8
TOP2AP11388 AC011352.1-201ENST00000512300 793 ntBASIC-2.46□□□□□ -2.8
TOP2AP11388 RNU6-948P-201ENST00000516374 107 ntBASIC-2.46□□□□□ -2.8
TOP2AP11388 SNORA25.13-201ENST00000516395 103 ntBASIC-2.46□□□□□ -2.8
TOP2AP11388 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC-2.46□□□□□ -2.8
TOP2AP11388 DEFB131E-201ENST00000532329 154 ntBASIC-2.46□□□□□ -2.8
TOP2AP11388 VN1R87P-201ENST00000596706 487 ntBASIC-2.46□□□□□ -2.8
TOP2AP11388 DEFB131E-202ENST00000602581 683 ntBASIC-2.46□□□□□ -2.8
TOP2AP11388 SNORA24.1-201ENST00000384401 135 ntBASIC-2.47□□□□□ -2.8
TOP2AP11388 MTCO2P33-201ENST00000402100 465 ntBASIC-2.47□□□□□ -2.8
TOP2AP11388 RNU7-94P-201ENST00000459576 63 ntBASIC-2.47□□□□□ -2.8
TOP2AP11388 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC-2.47□□□□□ -2.8
TOP2AP11388 RNU6-545P-201ENST00000362681 104 ntBASIC-2.47□□□□□ -2.81
TOP2AP11388 SNORD14.1-201ENST00000365609 90 ntBASIC-2.47□□□□□ -2.81
TOP2AP11388 MIR496-201ENST00000385226 102 ntBASIC-2.47□□□□□ -2.81
TOP2AP11388 AC016907.1-201ENST00000419483 435 ntBASIC-2.47□□□□□ -2.81
TOP2AP11388 ZNF736P12Y-201ENST00000443152 1243 ntBASIC-2.47□□□□□ -2.81
TOP2AP11388 ZNF736P4Y-201ENST00000454995 1243 ntBASIC-2.47□□□□□ -2.81
TOP2AP11388 RNU7-185P-201ENST00000459215 60 ntBASIC-2.47□□□□□ -2.81
TOP2AP11388 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC-2.47□□□□□ -2.81
TOP2AP11388 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC-2.47□□□□□ -2.81
TOP2AP11388 AL596327.1-201ENST00000603629 213 ntBASIC-2.47□□□□□ -2.81
TOP2AP11388 MIRLET7C-201ENST00000362160 84 ntBASIC-2.48□□□□□ -2.81
TOP2AP11388 Y_RNA.352-201ENST00000365439 102 ntBASIC-2.48□□□□□ -2.81
TOP2AP11388 Y_RNA.403-201ENST00000383977 101 ntBASIC-2.48□□□□□ -2.81
TOP2AP11388 SNORD116-20-201ENST00000384529 92 ntBASIC-2.48□□□□□ -2.81
TOP2AP11388 ZNF736P7Y-201ENST00000425158 820 ntBASIC-2.48□□□□□ -2.81
TOP2AP11388 AC092447.3-201ENST00000426027 686 ntBASIC-2.48□□□□□ -2.81
TOP2AP11388 SNRPGP10-201ENST00000432323 225 ntBASIC-2.48□□□□□ -2.81
TOP2AP11388 AC069431.2-201ENST00000604149 1099 ntBASIC-2.48□□□□□ -2.81
TOP2AP11388 AL139022.2-201ENST00000606934 443 ntBASIC-2.48□□□□□ -2.81
TOP2AP11388 AC006927.4-201ENST00000639187 543 ntBASIC-2.48□□□□□ -2.81
TOP2AP11388 RNU6-726P-201ENST00000364680 107 ntBASIC-2.49□□□□□ -2.81
TOP2AP11388 RNU6-1250P-201ENST00000391218 107 ntBASIC-2.49□□□□□ -2.81
TOP2AP11388 Y_RNA.617-201ENST00000410920 90 ntBASIC-2.49□□□□□ -2.81
TOP2AP11388 AC022028.1-201ENST00000412054 408 ntBASIC-2.49□□□□□ -2.81
TOP2AP11388 MTND1P26-201ENST00000440488 538 ntBASIC-2.49□□□□□ -2.81
TOP2AP11388 GMFBP1-201ENST00000467831 427 ntBASIC-2.49□□□□□ -2.81
TOP2AP11388 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC-2.49□□□□□ -2.81
TOP2AP11388 AC005178.1-201ENST00000508392 440 ntBASIC-2.49□□□□□ -2.81
TOP2AP11388 MTND3P5-201ENST00000512798 333 ntBASIC-2.49□□□□□ -2.81
TOP2AP11388 SNORA31.19-201ENST00000517079 126 ntBASIC-2.49□□□□□ -2.81
TOP2AP11388 AC090517.1-201ENST00000569307 266 ntBASIC-2.49□□□□□ -2.81
TOP2AP11388 OR4H6P-202ENST00000603819 340 ntBASIC-2.49□□□□□ -2.81
TOP2AP11388 RNU6-637P-201ENST00000384050 107 ntBASIC-2.5□□□□□ -2.81
TOP2AP11388 MIR527-201ENST00000385244 85 ntBASIC-2.5□□□□□ -2.81
TOP2AP11388 SNORD110-201ENST00000408189 75 ntBASIC-2.5□□□□□ -2.81
TOP2AP11388 RNU6-1001P-201ENST00000411265 100 ntBASIC-2.5□□□□□ -2.81
TOP2AP11388 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC-2.5□□□□□ -2.81
TOP2AP11388 ZNF299P-201ENST00000406845 1804 ntBASIC-2.51□□□□□ -2.81
TOP2AP11388 RNU7-59P-201ENST00000459101 61 ntBASIC-2.51□□□□□ -2.81
TOP2AP11388 RNU7-28P-201ENST00000516759 62 ntBASIC-2.51□□□□□ -2.81
TOP2AP11388 AC092608.3-201ENST00000625017 386 ntBASIC-2.51□□□□□ -2.81
TOP2AP11388 AC073869.9-201ENST00000641610 120 ntBASIC-2.51□□□□□ -2.81
TOP2AP11388 SNORA40C-201ENST00000391285 128 ntBASIC-2.52□□□□□ -2.81
TOP2AP11388 RNU2-54P-201ENST00000410299 190 ntBASIC-2.52□□□□□ -2.81
TOP2AP11388 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC-2.52□□□□□ -2.81
TOP2AP11388 AC020550.1-201ENST00000447385 163 ntBASIC-2.52□□□□□ -2.81
TOP2AP11388 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC-2.52□□□□□ -2.81
Retrieved 100 of 98,524 protein–RNA pairs in 119.6 ms