Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
RAB40ALP0C0E4 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.63□□□□□ -2.15
RAB40ALP0C0E4 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
RAB40ALP0C0E4 Y_RNA.315-201ENST00000365117 102 ntBASIC1.63□□□□□ -2.15
RAB40ALP0C0E4 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
RAB40ALP0C0E4 RNU6-360P-201ENST00000390944 104 ntBASIC1.63□□□□□ -2.15
RAB40ALP0C0E4 FTH1P12-201ENST00000432137 551 ntBASIC1.63□□□□□ -2.15
RAB40ALP0C0E4 AC005002.2-201ENST00000438228 269 ntBASIC1.63□□□□□ -2.15
RAB40ALP0C0E4 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.63□□□□□ -2.15
RAB40ALP0C0E4 MRPS10P1-201ENST00000448483 130 ntBASIC1.63□□□□□ -2.15
RAB40ALP0C0E4 AC027575.1-201ENST00000481064 460 ntBASIC1.63□□□□□ -2.15
RAB40ALP0C0E4 AP002001.1-203ENST00000534002 267 ntBASIC1.63□□□□□ -2.15
RAB40ALP0C0E4 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.63□□□□□ -2.15
RAB40ALP0C0E4 MIR3198-2-201ENST00000577868 80 ntBASIC1.63□□□□□ -2.15
RAB40ALP0C0E4 AL133255.1-201ENST00000606374 441 ntBASIC1.63□□□□□ -2.15
RAB40ALP0C0E4 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.63□□□□□ -2.15
RAB40ALP0C0E4 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
RAB40ALP0C0E4 RNU6-457P-201ENST00000363999 107 ntBASIC1.62□□□□□ -2.15
RAB40ALP0C0E4 Y_RNA.338-201ENST00000365320 114 ntBASIC1.62□□□□□ -2.15
RAB40ALP0C0E4 SNORA20B-201ENST00000384220 132 ntBASIC1.62□□□□□ -2.15
RAB40ALP0C0E4 SNORA17.3-201ENST00000391159 129 ntBASIC1.62□□□□□ -2.15
RAB40ALP0C0E4 AL355796.1-201ENST00000406706 323 ntBASIC1.62□□□□□ -2.15
RAB40ALP0C0E4 MIR1267-201ENST00000408723 78 ntBASIC1.62□□□□□ -2.15
RAB40ALP0C0E4 COX6CP10-201ENST00000416832 224 ntBASIC1.62□□□□□ -2.15
RAB40ALP0C0E4 HSPE1P21-201ENST00000438283 308 ntBASIC1.62□□□□□ -2.15
RAB40ALP0C0E4 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.62□□□□□ -2.15
RAB40ALP0C0E4 CHEK2P4-201ENST00000450340 246 ntBASIC1.62□□□□□ -2.15
RAB40ALP0C0E4 snoU13.27-201ENST00000459278 104 ntBASIC1.62□□□□□ -2.15
RAB40ALP0C0E4 RPS26P45-201ENST00000471748 340 ntBASIC1.62□□□□□ -2.15
RAB40ALP0C0E4 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.62□□□□□ -2.15
RAB40ALP0C0E4 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.62□□□□□ -2.15
RAB40ALP0C0E4 MIR4498-201ENST00000577599 66 ntBASIC1.62□□□□□ -2.15
RAB40ALP0C0E4 AC092447.9-201ENST00000603395 144 ntBASIC1.62□□□□□ -2.15
RAB40ALP0C0E4 AC104985.2-201ENST00000620598 500 ntBASIC1.62□□□□□ -2.15
RAB40ALP0C0E4 MIR4272-201ENST00000635924 64 ntBASIC1.62□□□□□ -2.15
RAB40ALP0C0E4 U6.108-201ENST00000637764 58 ntBASIC1.62□□□□□ -2.15
RAB40ALP0C0E4 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.61□□□□□ -2.15
RAB40ALP0C0E4 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
RAB40ALP0C0E4 MIR424-201ENST00000362227 98 ntBASIC1.61□□□□□ -2.15
RAB40ALP0C0E4 Y_RNA.27-201ENST00000362540 103 ntBASIC1.61□□□□□ -2.15
RAB40ALP0C0E4 Y_RNA.39-201ENST00000362620 98 ntBASIC1.61□□□□□ -2.15
RAB40ALP0C0E4 RNU6-961P-201ENST00000363893 105 ntBASIC1.61□□□□□ -2.15
RAB40ALP0C0E4 RNU6-454P-201ENST00000364292 107 ntBASIC1.61□□□□□ -2.15
RAB40ALP0C0E4 Y_RNA.252-201ENST00000364556 101 ntBASIC1.61□□□□□ -2.15
RAB40ALP0C0E4 RNU6-407P-201ENST00000365280 104 ntBASIC1.61□□□□□ -2.15
RAB40ALP0C0E4 SNORA4.2-201ENST00000365313 147 ntBASIC1.61□□□□□ -2.15
RAB40ALP0C0E4 Y_RNA.496-201ENST00000384444 101 ntBASIC1.61□□□□□ -2.15
RAB40ALP0C0E4 RNA5SP109-201ENST00000391010 116 ntBASIC1.61□□□□□ -2.15
RAB40ALP0C0E4 MTCO3P19-201ENST00000415864 321 ntBASIC1.61□□□□□ -2.15
RAB40ALP0C0E4 RPL31P63-201ENST00000422565 375 ntBASIC1.61□□□□□ -2.15
RAB40ALP0C0E4 AC092473.1-201ENST00000441098 221 ntBASIC1.61□□□□□ -2.15
RAB40ALP0C0E4 RPL26P26-201ENST00000480251 434 ntBASIC1.61□□□□□ -2.15
RAB40ALP0C0E4 AC008834.1-201ENST00000511612 175 ntBASIC1.61□□□□□ -2.15
RAB40ALP0C0E4 RNU7-99P-201ENST00000516271 62 ntBASIC1.61□□□□□ -2.15
RAB40ALP0C0E4 RNU7-128P-201ENST00000517247 62 ntBASIC1.61□□□□□ -2.15
RAB40ALP0C0E4 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.61□□□□□ -2.15
RAB40ALP0C0E4 MIR4419B-201ENST00000577260 68 ntBASIC1.61□□□□□ -2.15
RAB40ALP0C0E4 MIR3618-201ENST00000580330 88 ntBASIC1.61□□□□□ -2.15
RAB40ALP0C0E4 AL138825.1-201ENST00000618587 192 ntBASIC1.61□□□□□ -2.15
RAB40ALP0C0E4 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
RAB40ALP0C0E4 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
RAB40ALP0C0E4 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.6□□□□□ -2.15
RAB40ALP0C0E4 RNU6-271P-201ENST00000363858 105 ntBASIC1.6□□□□□ -2.15
RAB40ALP0C0E4 Y_RNA.431-201ENST00000384086 102 ntBASIC1.6□□□□□ -2.15
RAB40ALP0C0E4 RNU6-708P-201ENST00000384217 107 ntBASIC1.6□□□□□ -2.15
RAB40ALP0C0E4 JTBP1-201ENST00000441314 247 ntBASIC1.6□□□□□ -2.15
RAB40ALP0C0E4 RNU7-34P-201ENST00000459394 64 ntBASIC1.6□□□□□ -2.15
RAB40ALP0C0E4 AC097462.1-201ENST00000514125 324 ntBASIC1.6□□□□□ -2.15
RAB40ALP0C0E4 RNU6-1170P-201ENST00000515974 106 ntBASIC1.6□□□□□ -2.15
RAB40ALP0C0E4 RNU6-1012P-201ENST00000516606 109 ntBASIC1.6□□□□□ -2.15
RAB40ALP0C0E4 AC023442.1-201ENST00000531247 422 ntBASIC1.6□□□□□ -2.15
RAB40ALP0C0E4 AC091925.1-201ENST00000623204 462 ntBASIC1.6□□□□□ -2.15
RAB40ALP0C0E4 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.6□□□□□ -2.15
RAB40ALP0C0E4 U6.115-201ENST00000636045 103 ntBASIC1.6□□□□□ -2.15
RAB40ALP0C0E4 U6.92-201ENST00000636464 89 ntBASIC1.6□□□□□ -2.15
RAB40ALP0C0E4 WWP1P1-201ENST00000466609 2769 ntBASIC1.6□□□□□ -2.15
RAB40ALP0C0E4 AC100821.1-201ENST00000523153 2479 ntBASIC1.6□□□□□ -2.15
RAB40ALP0C0E4 MIR378A-201ENST00000362177 66 ntBASIC1.59□□□□□ -2.15
RAB40ALP0C0E4 Y_RNA.5-201ENST00000362334 102 ntBASIC1.59□□□□□ -2.15
RAB40ALP0C0E4 Y_RNA.197-201ENST00000364004 102 ntBASIC1.59□□□□□ -2.15
RAB40ALP0C0E4 RNU1-115P-201ENST00000365329 160 ntBASIC1.59□□□□□ -2.15
RAB40ALP0C0E4 RPL21P1-201ENST00000399532 476 ntBASIC1.59□□□□□ -2.15
RAB40ALP0C0E4 RPL23AP36-201ENST00000413895 458 ntBASIC1.59□□□□□ -2.15
RAB40ALP0C0E4 AC018865.2-201ENST00000423631 129 ntBASIC1.59□□□□□ -2.15
RAB40ALP0C0E4 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.59□□□□□ -2.15
RAB40ALP0C0E4 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.59□□□□□ -2.15
RAB40ALP0C0E4 AL606517.2-201ENST00000442855 241 ntBASIC1.59□□□□□ -2.15
RAB40ALP0C0E4 AC108729.3-201ENST00000513484 108 ntBASIC1.59□□□□□ -2.15
RAB40ALP0C0E4 RNA5SP20-201ENST00000515976 84 ntBASIC1.59□□□□□ -2.15
RAB40ALP0C0E4 HSBP1P1-201ENST00000555205 166 ntBASIC1.59□□□□□ -2.15
RAB40ALP0C0E4 MIR4709-201ENST00000577272 72 ntBASIC1.59□□□□□ -2.15
RAB40ALP0C0E4 MIR4659A-201ENST00000580269 81 ntBASIC1.59□□□□□ -2.15
RAB40ALP0C0E4 AC073413.2-201ENST00000604332 360 ntBASIC1.59□□□□□ -2.15
RAB40ALP0C0E4 AL080274.1-201ENST00000605565 220 ntBASIC1.59□□□□□ -2.15
RAB40ALP0C0E4 AC011476.5-201ENST00000615594 130 ntBASIC1.59□□□□□ -2.15
RAB40ALP0C0E4 AC004467.1-201ENST00000615678 330 ntBASIC1.59□□□□□ -2.15
RAB40ALP0C0E4 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
RAB40ALP0C0E4 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
RAB40ALP0C0E4 SNORA27.1-201ENST00000362604 124 ntBASIC1.58□□□□□ -2.16
RAB40ALP0C0E4 Y_RNA.419-201ENST00000384041 102 ntBASIC1.58□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 162.6 ms