Protein–RNA interactions for Protein: P03905

MT-ND4, NADH-ubiquinone oxidoreductase chain 4, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND4P03905 RNU6-373P-201ENST00000411247 98 ntBASIC0.7□□□□□ -2.3
MT-ND4P03905 RNU2-64P-201ENST00000411315 191 ntBASIC0.7□□□□□ -2.3
MT-ND4P03905 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.7□□□□□ -2.3
MT-ND4P03905 ELOCP21-201ENST00000412558 336 ntBASIC0.7□□□□□ -2.3
MT-ND4P03905 HMGN1P7-201ENST00000491722 313 ntBASIC0.7□□□□□ -2.3
MT-ND4P03905 RNU6-351P-201ENST00000516097 100 ntBASIC0.7□□□□□ -2.3
MT-ND4P03905 RNU2-56P-201ENST00000516826 190 ntBASIC0.7□□□□□ -2.3
MT-ND4P03905 Y_RNA.706-201ENST00000516933 99 ntBASIC0.7□□□□□ -2.3
MT-ND4P03905 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC0.7□□□□□ -2.3
MT-ND4P03905 AC125232.2-201ENST00000592457 143 ntBASIC0.7□□□□□ -2.3
MT-ND4P03905 AC100812.1-201ENST00000607622 580 ntBASIC0.7□□□□□ -2.3
MT-ND4P03905 MIR6128-201ENST00000615528 109 ntBASIC0.7□□□□□ -2.3
MT-ND4P03905 AC048344.4-201ENST00000619744 527 ntBASIC0.7□□□□□ -2.3
MT-ND4P03905 AC100810.6-201ENST00000638068 285 ntBASIC0.7□□□□□ -2.3
MT-ND4P03905 RNU6-407P-201ENST00000365280 104 ntBASIC0.69□□□□□ -2.3
MT-ND4P03905 SNORA2.2-201ENST00000365473 135 ntBASIC0.69□□□□□ -2.3
MT-ND4P03905 RNU6-1080P-201ENST00000383982 107 ntBASIC0.69□□□□□ -2.3
MT-ND4P03905 Y_RNA.554-201ENST00000384672 102 ntBASIC0.69□□□□□ -2.3
MT-ND4P03905 MIR181A1-201ENST00000385026 110 ntBASIC0.69□□□□□ -2.3
MT-ND4P03905 MIR329-1-201ENST00000385028 80 ntBASIC0.69□□□□□ -2.3
MT-ND4P03905 SNORD12-201ENST00000391002 90 ntBASIC0.69□□□□□ -2.3
MT-ND4P03905 AC114482.1-201ENST00000418010 247 ntBASIC0.69□□□□□ -2.3
MT-ND4P03905 AC018865.2-201ENST00000423631 129 ntBASIC0.69□□□□□ -2.3
MT-ND4P03905 MTND2P22-201ENST00000444325 1033 ntBASIC0.69□□□□□ -2.3
MT-ND4P03905 MTND1P17-201ENST00000448961 204 ntBASIC0.69□□□□□ -2.3
MT-ND4P03905 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC0.69□□□□□ -2.3
MT-ND4P03905 RPS26P48-201ENST00000491713 339 ntBASIC0.69□□□□□ -2.3
MT-ND4P03905 AC022493.2-201ENST00000506122 481 ntBASIC0.69□□□□□ -2.3
MT-ND4P03905 PSMC1P5-201ENST00000512850 177 ntBASIC0.69□□□□□ -2.3
MT-ND4P03905 RNA5SP20-201ENST00000515976 84 ntBASIC0.69□□□□□ -2.3
MT-ND4P03905 RNU7-12P-201ENST00000516030 62 ntBASIC0.69□□□□□ -2.3
MT-ND4P03905 RNU6-566P-201ENST00000516790 107 ntBASIC0.69□□□□□ -2.3
MT-ND4P03905 RNU6-341P-201ENST00000516973 96 ntBASIC0.69□□□□□ -2.3
MT-ND4P03905 RNU1-54P-201ENST00000517181 120 ntBASIC0.69□□□□□ -2.3
MT-ND4P03905 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.69□□□□□ -2.3
MT-ND4P03905 RPL21P9-201ENST00000556149 474 ntBASIC0.69□□□□□ -2.3
MT-ND4P03905 MIR4653-201ENST00000585107 83 ntBASIC0.69□□□□□ -2.3
MT-ND4P03905 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
MT-ND4P03905 AL117336.2-201ENST00000602435 335 ntBASIC0.69□□□□□ -2.3
MT-ND4P03905 AL357075.2-201ENST00000614906 189 ntBASIC0.69□□□□□ -2.3
MT-ND4P03905 MIRLET7C-201ENST00000362160 84 ntBASIC0.68□□□□□ -2.3
MT-ND4P03905 SNORA27.1-201ENST00000362604 124 ntBASIC0.68□□□□□ -2.3
MT-ND4P03905 RNY4P14-201ENST00000363656 96 ntBASIC0.68□□□□□ -2.3
MT-ND4P03905 RNU6-1264P-201ENST00000383891 107 ntBASIC0.68□□□□□ -2.3
MT-ND4P03905 AL606490.4-201ENST00000423117 127 ntBASIC0.68□□□□□ -2.3
MT-ND4P03905 EIF1P2-201ENST00000428233 350 ntBASIC0.68□□□□□ -2.3
MT-ND4P03905 AC104332.1-201ENST00000440471 797 ntBASIC0.68□□□□□ -2.3
MT-ND4P03905 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC0.68□□□□□ -2.3
MT-ND4P03905 RNU6-322P-201ENST00000516010 103 ntBASIC0.68□□□□□ -2.3
MT-ND4P03905 RNU6-1291P-201ENST00000516591 104 ntBASIC0.68□□□□□ -2.3
MT-ND4P03905 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC0.68□□□□□ -2.3
MT-ND4P03905 AP002001.1-203ENST00000534002 267 ntBASIC0.68□□□□□ -2.3
MT-ND4P03905 NDUFAF4P1-201ENST00000559425 519 ntBASIC0.68□□□□□ -2.3
MT-ND4P03905 MIR4498-201ENST00000577599 66 ntBASIC0.68□□□□□ -2.3
MT-ND4P03905 MIR4698-201ENST00000577795 80 ntBASIC0.68□□□□□ -2.3
MT-ND4P03905 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.68□□□□□ -2.3
MT-ND4P03905 AC073544.1-201ENST00000600110 1595 ntBASIC0.67□□□□□ -2.3
MT-ND4P03905 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
MT-ND4P03905 RNU4-24P-201ENST00000364565 139 ntBASIC0.67□□□□□ -2.3
MT-ND4P03905 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC0.67□□□□□ -2.3
MT-ND4P03905 RNU6-969P-201ENST00000383900 105 ntBASIC0.67□□□□□ -2.3
MT-ND4P03905 Y_RNA.473-201ENST00000384333 102 ntBASIC0.67□□□□□ -2.3
MT-ND4P03905 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC0.67□□□□□ -2.3
MT-ND4P03905 UQCRBP2-201ENST00000447827 297 ntBASIC0.67□□□□□ -2.3
MT-ND4P03905 SNORD5.1-201ENST00000458800 75 ntBASIC0.67□□□□□ -2.3
MT-ND4P03905 AC005840.1-201ENST00000498412 377 ntBASIC0.67□□□□□ -2.3
MT-ND4P03905 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC0.67□□□□□ -2.3
MT-ND4P03905 TRMT112P2-201ENST00000512910 132 ntBASIC0.67□□□□□ -2.3
MT-ND4P03905 RNU7-28P-201ENST00000516759 62 ntBASIC0.67□□□□□ -2.3
MT-ND4P03905 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.67□□□□□ -2.3
MT-ND4P03905 AP002004.2-201ENST00000531656 154 ntBASIC0.67□□□□□ -2.3
MT-ND4P03905 AL121579.1-201ENST00000555129 305 ntBASIC0.67□□□□□ -2.3
MT-ND4P03905 AC090617.3-201ENST00000573670 475 ntBASIC0.67□□□□□ -2.3
MT-ND4P03905 MIR5701-3-201ENST00000578890 82 ntBASIC0.67□□□□□ -2.3
MT-ND4P03905 MIR3973-201ENST00000579824 107 ntBASIC0.67□□□□□ -2.3
MT-ND4P03905 MIR5701-1-201ENST00000585138 82 ntBASIC0.67□□□□□ -2.3
MT-ND4P03905 MIR5701-2-201ENST00000615634 82 ntBASIC0.67□□□□□ -2.3
MT-ND4P03905 MIR3662-201ENST00000637030 95 ntBASIC0.67□□□□□ -2.3
MT-ND4P03905 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC0.67□□□□□ -2.3
MT-ND4P03905 AC008163.1-202ENST00000636004 2889 ntBASIC0.67□□□□□ -2.3
MT-ND4P03905 Y_RNA.9-201ENST00000362354 101 ntBASIC0.66□□□□□ -2.3
MT-ND4P03905 RNA5SP361-201ENST00000362686 118 ntBASIC0.66□□□□□ -2.3
MT-ND4P03905 Y_RNA.89-201ENST00000363031 102 ntBASIC0.66□□□□□ -2.3
MT-ND4P03905 Y_RNA.301-201ENST00000364990 103 ntBASIC0.66□□□□□ -2.3
MT-ND4P03905 SNORD114-24-201ENST00000365029 72 ntBASIC0.66□□□□□ -2.3
MT-ND4P03905 RNU6-1145P-201ENST00000384246 107 ntBASIC0.66□□□□□ -2.3
MT-ND4P03905 SNORA80D-201ENST00000384488 135 ntBASIC0.66□□□□□ -2.3
MT-ND4P03905 RNU6-376P-201ENST00000384731 106 ntBASIC0.66□□□□□ -2.3
MT-ND4P03905 MIR562-201ENST00000384894 95 ntBASIC0.66□□□□□ -2.3
MT-ND4P03905 RNU11-5P-201ENST00000391216 129 ntBASIC0.66□□□□□ -2.3
MT-ND4P03905 RNA5SP482-201ENST00000391269 118 ntBASIC0.66□□□□□ -2.3
MT-ND4P03905 MIR190B-201ENST00000401119 79 ntBASIC0.66□□□□□ -2.3
MT-ND4P03905 MTCYBP4-201ENST00000401524 249 ntBASIC0.66□□□□□ -2.3
MT-ND4P03905 AC009161.1-201ENST00000417306 376 ntBASIC0.66□□□□□ -2.3
MT-ND4P03905 MTND4LP16-201ENST00000440828 295 ntBASIC0.66□□□□□ -2.3
MT-ND4P03905 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.66□□□□□ -2.3
MT-ND4P03905 Z83846.1-201ENST00000446798 265 ntBASIC0.66□□□□□ -2.3
MT-ND4P03905 RPL39P39-201ENST00000455840 151 ntBASIC0.66□□□□□ -2.3
MT-ND4P03905 RNU6-113P-201ENST00000516653 101 ntBASIC0.66□□□□□ -2.3
MT-ND4P03905 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.66□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms