Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.53□□□□□ -2.16
MT-ND1P03886 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC1.53□□□□□ -2.16
MT-ND1P03886 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.53□□□□□ -2.16
MT-ND1P03886 AC084768.2-201ENST00000622736 221 ntBASIC1.53□□□□□ -2.16
MT-ND1P03886 Y_RNA.101-201ENST00000363154 102 ntBASIC1.52□□□□□ -2.17
MT-ND1P03886 RNU6-450P-201ENST00000364654 107 ntBASIC1.52□□□□□ -2.17
MT-ND1P03886 RNU6-338P-201ENST00000383888 105 ntBASIC1.52□□□□□ -2.17
MT-ND1P03886 RNU6-20P-201ENST00000384106 107 ntBASIC1.52□□□□□ -2.17
MT-ND1P03886 RNU6-417P-201ENST00000384712 107 ntBASIC1.52□□□□□ -2.17
MT-ND1P03886 MRPL42P3-201ENST00000401492 326 ntBASIC1.52□□□□□ -2.17
MT-ND1P03886 MRPL35P1-201ENST00000404272 572 ntBASIC1.52□□□□□ -2.17
MT-ND1P03886 AL355796.1-201ENST00000406706 323 ntBASIC1.52□□□□□ -2.17
MT-ND1P03886 RN7SKP101-201ENST00000411376 320 ntBASIC1.52□□□□□ -2.17
MT-ND1P03886 TOMM22P2-201ENST00000430735 237 ntBASIC1.52□□□□□ -2.17
MT-ND1P03886 AC005534.2-201ENST00000431047 433 ntBASIC1.52□□□□□ -2.17
MT-ND1P03886 FCF1P4-201ENST00000448326 183 ntBASIC1.52□□□□□ -2.17
MT-ND1P03886 AC074290.1-201ENST00000448883 135 ntBASIC1.52□□□□□ -2.17
MT-ND1P03886 SNORA59A-201ENST00000459326 152 ntBASIC1.52□□□□□ -2.17
MT-ND1P03886 RPL23AP63-201ENST00000498752 471 ntBASIC1.52□□□□□ -2.17
MT-ND1P03886 RNU6-475P-201ENST00000516073 104 ntBASIC1.52□□□□□ -2.17
MT-ND1P03886 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.52□□□□□ -2.17
MT-ND1P03886 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.52□□□□□ -2.17
MT-ND1P03886 MIR5094-201ENST00000578766 85 ntBASIC1.52□□□□□ -2.17
MT-ND1P03886 AL356055.1-201ENST00000602528 446 ntBASIC1.52□□□□□ -2.17
MT-ND1P03886 AL353149.1-201ENST00000610667 244 ntBASIC1.52□□□□□ -2.17
MT-ND1P03886 AC004467.1-201ENST00000615678 330 ntBASIC1.52□□□□□ -2.17
MT-ND1P03886 MIR3674-201ENST00000636576 68 ntBASIC1.52□□□□□ -2.17
MT-ND1P03886 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.52□□□□□ -2.17
MT-ND1P03886 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
MT-ND1P03886 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
MT-ND1P03886 snoU2-30.2-201ENST00000362805 70 ntBASIC1.51□□□□□ -2.17
MT-ND1P03886 RNU6-626P-201ENST00000363354 107 ntBASIC1.51□□□□□ -2.17
MT-ND1P03886 RNU6-112P-201ENST00000363599 104 ntBASIC1.51□□□□□ -2.17
MT-ND1P03886 RNU6-1240P-201ENST00000365155 104 ntBASIC1.51□□□□□ -2.17
MT-ND1P03886 SNORD14.1-201ENST00000365609 90 ntBASIC1.51□□□□□ -2.17
MT-ND1P03886 U8.13-201ENST00000390842 128 ntBASIC1.51□□□□□ -2.17
MT-ND1P03886 RNU6-823P-201ENST00000391042 103 ntBASIC1.51□□□□□ -2.17
MT-ND1P03886 RNA5SP467-201ENST00000391274 118 ntBASIC1.51□□□□□ -2.17
MT-ND1P03886 SDAD1P3-201ENST00000427380 333 ntBASIC1.51□□□□□ -2.17
MT-ND1P03886 AC093852.1-201ENST00000503587 266 ntBASIC1.51□□□□□ -2.17
MT-ND1P03886 RNU6-988P-201ENST00000519081 107 ntBASIC1.51□□□□□ -2.17
MT-ND1P03886 AC023442.1-201ENST00000531247 422 ntBASIC1.51□□□□□ -2.17
MT-ND1P03886 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.51□□□□□ -2.17
MT-ND1P03886 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.51□□□□□ -2.17
MT-ND1P03886 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.51□□□□□ -2.17
MT-ND1P03886 AC010205.1-201ENST00000616668 449 ntBASIC1.51□□□□□ -2.17
MT-ND1P03886 U6.115-201ENST00000636045 103 ntBASIC1.51□□□□□ -2.17
MT-ND1P03886 U6.108-201ENST00000637764 58 ntBASIC1.51□□□□□ -2.17
MT-ND1P03886 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.51□□□□□ -2.17
MT-ND1P03886 WWP1P1-201ENST00000466609 2769 ntBASIC1.5□□□□□ -2.17
MT-ND1P03886 RNU6-439P-201ENST00000384188 106 ntBASIC1.5□□□□□ -2.17
MT-ND1P03886 RNA5SP475-201ENST00000410568 110 ntBASIC1.5□□□□□ -2.17
MT-ND1P03886 RNU6-1199P-201ENST00000411249 104 ntBASIC1.5□□□□□ -2.17
MT-ND1P03886 AC245047.4-201ENST00000433189 144 ntBASIC1.5□□□□□ -2.17
MT-ND1P03886 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.5□□□□□ -2.17
MT-ND1P03886 RPEP5-201ENST00000441137 268 ntBASIC1.5□□□□□ -2.17
MT-ND1P03886 RNU6-250P-201ENST00000516958 103 ntBASIC1.5□□□□□ -2.17
MT-ND1P03886 AC027419.1-201ENST00000522976 328 ntBASIC1.5□□□□□ -2.17
MT-ND1P03886 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.5□□□□□ -2.17
MT-ND1P03886 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC1.5□□□□□ -2.17
MT-ND1P03886 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
MT-ND1P03886 RNU6-414P-201ENST00000363705 104 ntBASIC1.49□□□□□ -2.17
MT-ND1P03886 RNU1-96P-201ENST00000364163 162 ntBASIC1.49□□□□□ -2.17
MT-ND1P03886 SNORA20B-201ENST00000384220 132 ntBASIC1.49□□□□□ -2.17
MT-ND1P03886 RNU6-997P-201ENST00000384725 107 ntBASIC1.49□□□□□ -2.17
MT-ND1P03886 MIR320A-201ENST00000385302 82 ntBASIC1.49□□□□□ -2.17
MT-ND1P03886 EBAG9P1-201ENST00000418955 543 ntBASIC1.49□□□□□ -2.17
MT-ND1P03886 snoU13.9-201ENST00000458927 103 ntBASIC1.49□□□□□ -2.17
MT-ND1P03886 AC010655.3-201ENST00000478818 450 ntBASIC1.49□□□□□ -2.17
MT-ND1P03886 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.49□□□□□ -2.17
MT-ND1P03886 RNU2-12P-201ENST00000517216 168 ntBASIC1.49□□□□□ -2.17
MT-ND1P03886 RNU7-128P-201ENST00000517247 62 ntBASIC1.49□□□□□ -2.17
MT-ND1P03886 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.49□□□□□ -2.17
MT-ND1P03886 MIR4255-201ENST00000579351 72 ntBASIC1.49□□□□□ -2.17
MT-ND1P03886 MIR4680-201ENST00000580906 66 ntBASIC1.49□□□□□ -2.17
MT-ND1P03886 MIR4513-201ENST00000581077 86 ntBASIC1.49□□□□□ -2.17
MT-ND1P03886 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.49□□□□□ -2.17
MT-ND1P03886 RPS29P30-201ENST00000600975 111 ntBASIC1.49□□□□□ -2.17
MT-ND1P03886 AL121655.1-201ENST00000605811 308 ntBASIC1.49□□□□□ -2.17
MT-ND1P03886 AC040896.1-201ENST00000613819 479 ntBASIC1.49□□□□□ -2.17
MT-ND1P03886 AL138825.1-201ENST00000618587 192 ntBASIC1.49□□□□□ -2.17
MT-ND1P03886 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
MT-ND1P03886 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
MT-ND1P03886 Y_RNA.158-201ENST00000363651 101 ntBASIC1.48□□□□□ -2.17
MT-ND1P03886 RNA5SP126-201ENST00000365092 109 ntBASIC1.48□□□□□ -2.17
MT-ND1P03886 SNORA33.2-201ENST00000365413 134 ntBASIC1.48□□□□□ -2.17
MT-ND1P03886 Y_RNA.424-201ENST00000384063 103 ntBASIC1.48□□□□□ -2.17
MT-ND1P03886 Y_RNA.471-201ENST00000384312 102 ntBASIC1.48□□□□□ -2.17
MT-ND1P03886 Y_RNA.527-201ENST00000384573 102 ntBASIC1.48□□□□□ -2.17
MT-ND1P03886 RNU6-296P-201ENST00000384608 107 ntBASIC1.48□□□□□ -2.17
MT-ND1P03886 AC008134.1-201ENST00000420943 193 ntBASIC1.48□□□□□ -2.17
MT-ND1P03886 AL121890.1-201ENST00000435457 205 ntBASIC1.48□□□□□ -2.17
MT-ND1P03886 AP003072.1-201ENST00000531740 145 ntBASIC1.48□□□□□ -2.17
MT-ND1P03886 AC084364.2-201ENST00000546924 395 ntBASIC1.48□□□□□ -2.17
MT-ND1P03886 MIR4423-201ENST00000580922 80 ntBASIC1.48□□□□□ -2.17
MT-ND1P03886 MIR4422-201ENST00000581938 83 ntBASIC1.48□□□□□ -2.17
MT-ND1P03886 AC124312.5-201ENST00000604451 268 ntBASIC1.48□□□□□ -2.17
MT-ND1P03886 AC069114.2-201ENST00000604699 304 ntBASIC1.48□□□□□ -2.17
MT-ND1P03886 MIR502-201ENST00000606349 86 ntBASIC1.48□□□□□ -2.17
MT-ND1P03886 AC005828.6-201ENST00000606610 232 ntBASIC1.48□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 116.9 ms