Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 AC010999.1-201ENST00000611856 324 ntBASIC-0.01□□□□□ -2.41
APOEP02649 AC073544.1-201ENST00000600110 1595 ntBASIC-0.02□□□□□ -2.41
APOEP02649 MIR7-2-201ENST00000384970 110 ntBASIC-0.02□□□□□ -2.41
APOEP02649 MIR516B2-201ENST00000385190 85 ntBASIC-0.02□□□□□ -2.41
APOEP02649 MIR1298-201ENST00000408783 112 ntBASIC-0.02□□□□□ -2.41
APOEP02649 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC-0.02□□□□□ -2.41
APOEP02649 Z99497.1-201ENST00000421282 135 ntBASIC-0.02□□□□□ -2.41
APOEP02649 Z82188.1-201ENST00000436709 154 ntBASIC-0.02□□□□□ -2.41
APOEP02649 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC-0.02□□□□□ -2.41
APOEP02649 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC-0.02□□□□□ -2.41
APOEP02649 MDM2-233ENST00000545204 398 ntTSL 5 BASIC-0.02□□□□□ -2.41
APOEP02649 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC-0.02□□□□□ -2.41
APOEP02649 AC022523.2-201ENST00000561045 150 ntBASIC-0.02□□□□□ -2.41
APOEP02649 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC-0.02□□□□□ -2.41
APOEP02649 MIR4667-201ENST00000578933 66 ntBASIC-0.02□□□□□ -2.41
APOEP02649 CPDP1-201ENST00000579660 283 ntBASIC-0.02□□□□□ -2.41
APOEP02649 MIR4764-201ENST00000580680 88 ntBASIC-0.02□□□□□ -2.41
APOEP02649 AC104695.3-201ENST00000604052 296 ntBASIC-0.02□□□□□ -2.41
APOEP02649 RAC1P9-201ENST00000604990 392 ntBASIC-0.02□□□□□ -2.41
APOEP02649 AC008536.2-201ENST00000607284 349 ntBASIC-0.02□□□□□ -2.41
APOEP02649 AC106754.1-201ENST00000562632 1513 ntBASIC-0.03□□□□□ -2.41
APOEP02649 ANKRD30BP1-201ENST00000451052 2186 ntBASIC-0.03□□□□□ -2.41
APOEP02649 Y_RNA.184-201ENST00000363884 108 ntBASIC-0.03□□□□□ -2.41
APOEP02649 SNORA20B-201ENST00000384220 132 ntBASIC-0.03□□□□□ -2.41
APOEP02649 RNU6-376P-201ENST00000384731 106 ntBASIC-0.03□□□□□ -2.41
APOEP02649 MIR452-201ENST00000385020 85 ntBASIC-0.03□□□□□ -2.41
APOEP02649 CALM2P3-201ENST00000400429 449 ntBASIC-0.03□□□□□ -2.41
APOEP02649 MIR1302-7-201ENST00000408841 72 ntBASIC-0.03□□□□□ -2.41
APOEP02649 SNORD83.1-201ENST00000411362 77 ntBASIC-0.03□□□□□ -2.41
APOEP02649 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC-0.03□□□□□ -2.41
APOEP02649 AC114811.1-201ENST00000507207 168 ntBASIC-0.03□□□□□ -2.41
APOEP02649 MTND4P7-201ENST00000523876 130 ntBASIC-0.03□□□□□ -2.41
APOEP02649 MIR4768-201ENST00000585270 74 ntBASIC-0.03□□□□□ -2.41
APOEP02649 AC011458.1-201ENST00000604034 617 ntBASIC-0.03□□□□□ -2.41
APOEP02649 RNU6-369P-201ENST00000362515 102 ntBASIC-0.04□□□□□ -2.42
APOEP02649 Y_RNA.319-201ENST00000365138 92 ntBASIC-0.04□□□□□ -2.42
APOEP02649 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC-0.04□□□□□ -2.42
APOEP02649 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC-0.04□□□□□ -2.42
APOEP02649 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC-0.04□□□□□ -2.42
APOEP02649 AL392103.1-201ENST00000447000 198 ntBASIC-0.04□□□□□ -2.42
APOEP02649 AL356010.1-201ENST00000456364 102 ntBASIC-0.04□□□□□ -2.42
APOEP02649 MTND2P14-201ENST00000482139 351 ntBASIC-0.04□□□□□ -2.42
APOEP02649 AC091885.1-201ENST00000506658 268 ntBASIC-0.04□□□□□ -2.42
APOEP02649 MTND1P22-201ENST00000510572 951 ntBASIC-0.04□□□□□ -2.42
APOEP02649 SNORA25.12-201ENST00000516202 82 ntBASIC-0.04□□□□□ -2.42
APOEP02649 RNU11-2P-201ENST00000516898 142 ntBASIC-0.04□□□□□ -2.42
APOEP02649 AL157687.1-201ENST00000554853 619 ntBASIC-0.04□□□□□ -2.42
APOEP02649 AC016597.2-201ENST00000613256 341 ntBASIC-0.04□□□□□ -2.42
APOEP02649 AL158209.2-201ENST00000619266 216 ntBASIC-0.04□□□□□ -2.42
APOEP02649 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC-0.04□□□□□ -2.42
APOEP02649 AC027279.3-201ENST00000625055 122 ntBASIC-0.04□□□□□ -2.42
APOEP02649 RNA5SP48-201ENST00000363969 126 ntBASIC-0.05□□□□□ -2.42
APOEP02649 SNORD14.1-201ENST00000365609 90 ntBASIC-0.05□□□□□ -2.42
APOEP02649 RNU6-815P-201ENST00000384080 113 ntBASIC-0.05□□□□□ -2.42
APOEP02649 Y_RNA.560-201ENST00000384689 102 ntBASIC-0.05□□□□□ -2.42
APOEP02649 MIR518A1-201ENST00000385068 85 ntBASIC-0.05□□□□□ -2.42
APOEP02649 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC-0.05□□□□□ -2.42
APOEP02649 PCNPP5-201ENST00000452246 481 ntBASIC-0.05□□□□□ -2.42
APOEP02649 AC018710.1-201ENST00000506509 158 ntBASIC-0.05□□□□□ -2.42
APOEP02649 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC-0.05□□□□□ -2.42
APOEP02649 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC-0.05□□□□□ -2.42
APOEP02649 MRPS36P3-201ENST00000519284 130 ntBASIC-0.05□□□□□ -2.42
APOEP02649 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC-0.05□□□□□ -2.42
APOEP02649 AC093027.1-201ENST00000546698 429 ntBASIC-0.05□□□□□ -2.42
APOEP02649 MIR3612-201ENST00000579753 87 ntBASIC-0.05□□□□□ -2.42
APOEP02649 SNORD50.1-201ENST00000362987 71 ntBASIC-0.06□□□□□ -2.42
APOEP02649 RNA5SP517-201ENST00000364724 117 ntBASIC-0.06□□□□□ -2.42
APOEP02649 RNU6-407P-201ENST00000365280 104 ntBASIC-0.06□□□□□ -2.42
APOEP02649 MIR520G-201ENST00000385064 90 ntBASIC-0.06□□□□□ -2.42
APOEP02649 MIR520H-201ENST00000385126 88 ntBASIC-0.06□□□□□ -2.42
APOEP02649 RNU6-679P-201ENST00000391003 106 ntBASIC-0.06□□□□□ -2.42
APOEP02649 AL590002.1-201ENST00000406554 418 ntBASIC-0.06□□□□□ -2.42
APOEP02649 RNU5A-5P-201ENST00000411054 116 ntBASIC-0.06□□□□□ -2.42
APOEP02649 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC-0.06□□□□□ -2.42
APOEP02649 AC018865.2-201ENST00000423631 129 ntBASIC-0.06□□□□□ -2.42
APOEP02649 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC-0.06□□□□□ -2.42
APOEP02649 MTND4P32-201ENST00000437189 1237 ntBASIC-0.06□□□□□ -2.42
APOEP02649 AL359672.1-201ENST00000442302 409 ntBASIC-0.06□□□□□ -2.42
APOEP02649 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC-0.06□□□□□ -2.42
APOEP02649 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC-0.06□□□□□ -2.42
APOEP02649 RNU6-189P-201ENST00000516120 101 ntBASIC-0.06□□□□□ -2.42
APOEP02649 SNORA18.7-201ENST00000516910 131 ntBASIC-0.06□□□□□ -2.42
APOEP02649 UBL5P4-201ENST00000562584 236 ntBASIC-0.06□□□□□ -2.42
APOEP02649 AL357078.3-201ENST00000607528 618 ntBASIC-0.06□□□□□ -2.42
APOEP02649 SNORD68-201ENST00000363214 84 ntBASIC-0.07□□□□□ -2.42
APOEP02649 Y_RNA.115-201ENST00000363272 98 ntBASIC-0.07□□□□□ -2.42
APOEP02649 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC-0.07□□□□□ -2.42
APOEP02649 AC073261.1-201ENST00000429409 121 ntBASIC-0.07□□□□□ -2.42
APOEP02649 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC-0.07□□□□□ -2.42
APOEP02649 AC093534.1-201ENST00000504977 132 ntBASIC-0.07□□□□□ -2.42
APOEP02649 RNA5SP20-201ENST00000515976 84 ntBASIC-0.07□□□□□ -2.42
APOEP02649 RNU6-107P-201ENST00000516643 102 ntBASIC-0.07□□□□□ -2.42
APOEP02649 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC-0.07□□□□□ -2.42
APOEP02649 NDUFAF4P1-201ENST00000559425 519 ntBASIC-0.07□□□□□ -2.42
APOEP02649 MIR5190-201ENST00000581537 80 ntBASIC-0.07□□□□□ -2.42
APOEP02649 AC012433.1-201ENST00000588916 398 ntBASIC-0.07□□□□□ -2.42
APOEP02649 AL121757.2-201ENST00000611223 313 ntBASIC-0.07□□□□□ -2.42
APOEP02649 AC078938.1-201ENST00000620993 318 ntBASIC-0.07□□□□□ -2.42
APOEP02649 MIR4315-1-201ENST00000636800 73 ntBASIC-0.07□□□□□ -2.42
APOEP02649 MIR4315-2-201ENST00000640925 73 ntBASIC-0.07□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 120.5 ms