Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 AC012414.2-201ENST00000559474 187 ntBASIC-0.54□□□□□ -2.5
SPTA1P02549 MIR4771-2-201ENST00000577758 74 ntBASIC-0.54□□□□□ -2.5
SPTA1P02549 MIR4771-1-201ENST00000582617 74 ntBASIC-0.54□□□□□ -2.5
SPTA1P02549 RBM11P1-201ENST00000604951 799 ntBASIC-0.54□□□□□ -2.5
SPTA1P02549 AC092574.1-201ENST00000609771 420 ntBASIC-0.54□□□□□ -2.5
SPTA1P02549 AC008250.2-201ENST00000615261 205 ntBASIC-0.54□□□□□ -2.5
SPTA1P02549 MIR7844-201ENST00000616161 122 ntBASIC-0.54□□□□□ -2.5
SPTA1P02549 AL136221.1-201ENST00000621449 509 ntBASIC-0.54□□□□□ -2.5
SPTA1P02549 Y_RNA.57-201ENST00000362806 113 ntBASIC-0.55□□□□□ -2.5
SPTA1P02549 RNY4P28-201ENST00000365281 93 ntBASIC-0.55□□□□□ -2.5
SPTA1P02549 Y_RNA.442-201ENST00000384131 102 ntBASIC-0.55□□□□□ -2.5
SPTA1P02549 SNORD83B-201ENST00000386745 93 ntBASIC-0.55□□□□□ -2.5
SPTA1P02549 RNU6-447P-201ENST00000410293 104 ntBASIC-0.55□□□□□ -2.5
SPTA1P02549 RNU6-1118P-201ENST00000410382 104 ntBASIC-0.55□□□□□ -2.5
SPTA1P02549 RNU6-1076P-201ENST00000410397 104 ntBASIC-0.55□□□□□ -2.5
SPTA1P02549 RNU6-355P-201ENST00000410427 104 ntBASIC-0.55□□□□□ -2.5
SPTA1P02549 RNU6-791P-201ENST00000410467 104 ntBASIC-0.55□□□□□ -2.5
SPTA1P02549 RNU6-705P-201ENST00000410601 104 ntBASIC-0.55□□□□□ -2.5
SPTA1P02549 RNU6-1100P-201ENST00000410691 104 ntBASIC-0.55□□□□□ -2.5
SPTA1P02549 RNU6-860P-201ENST00000410860 104 ntBASIC-0.55□□□□□ -2.5
SPTA1P02549 RNU6-1217P-201ENST00000411276 104 ntBASIC-0.55□□□□□ -2.5
SPTA1P02549 RNU6-785P-201ENST00000411324 104 ntBASIC-0.55□□□□□ -2.5
SPTA1P02549 AC007283.2-201ENST00000424739 197 ntBASIC-0.55□□□□□ -2.5
SPTA1P02549 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC-0.55□□□□□ -2.5
SPTA1P02549 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC-0.55□□□□□ -2.5
SPTA1P02549 CR383656.4-201ENST00000546909 122 ntBASIC-0.55□□□□□ -2.5
SPTA1P02549 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC-0.55□□□□□ -2.5
SPTA1P02549 MIR4438-201ENST00000585271 93 ntBASIC-0.55□□□□□ -2.5
SPTA1P02549 AC073539.2-201ENST00000597113 165 ntBASIC-0.55□□□□□ -2.5
SPTA1P02549 AP000753.3-201ENST00000604083 169 ntBASIC-0.55□□□□□ -2.5
SPTA1P02549 U6.90-201ENST00000614007 104 ntBASIC-0.55□□□□□ -2.5
SPTA1P02549 U6.70-201ENST00000620287 104 ntBASIC-0.55□□□□□ -2.5
SPTA1P02549 Y_RNA.117-201ENST00000363294 101 ntBASIC-0.55□□□□□ -2.5
SPTA1P02549 RNU6-511P-201ENST00000363496 107 ntBASIC-0.55□□□□□ -2.5
SPTA1P02549 Y_RNA.490-201ENST00000384413 102 ntBASIC-0.55□□□□□ -2.5
SPTA1P02549 RNU6-370P-201ENST00000411008 104 ntBASIC-0.55□□□□□ -2.5
SPTA1P02549 BTBD7P2-201ENST00000441962 620 ntBASIC-0.55□□□□□ -2.5
SPTA1P02549 AP000542.1-201ENST00000448473 371 ntBASIC-0.55□□□□□ -2.5
SPTA1P02549 RNU7-185P-201ENST00000459215 60 ntBASIC-0.55□□□□□ -2.5
SPTA1P02549 AP000870.1-201ENST00000472927 406 ntBASIC-0.55□□□□□ -2.5
SPTA1P02549 MIR2115-201ENST00000516657 100 ntBASIC-0.55□□□□□ -2.5
SPTA1P02549 RNU6-180P-201ENST00000516697 61 ntBASIC-0.55□□□□□ -2.5
SPTA1P02549 MIR378D2-201ENST00000580636 98 ntBASIC-0.55□□□□□ -2.5
SPTA1P02549 VN1R87P-201ENST00000596706 487 ntBASIC-0.55□□□□□ -2.5
SPTA1P02549 ZNF92P2-201ENST00000600543 1059 ntBASIC-0.55□□□□□ -2.5
SPTA1P02549 AC234772.3-201ENST00000602277 528 ntBASIC-0.55□□□□□ -2.5
SPTA1P02549 AC006380.1-201ENST00000603598 186 ntBASIC-0.55□□□□□ -2.5
SPTA1P02549 AC026741.1-201ENST00000605892 482 ntBASIC-0.55□□□□□ -2.5
SPTA1P02549 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC-0.55□□□□□ -2.5
SPTA1P02549 AC108747.1-201ENST00000609508 535 ntBASIC-0.55□□□□□ -2.5
SPTA1P02549 AC244669.1-204ENST00000621564 178 ntBASIC-0.55□□□□□ -2.5
SPTA1P02549 RNA5SP93-201ENST00000362525 114 ntBASIC-0.56□□□□□ -2.5
SPTA1P02549 Y_RNA.311-201ENST00000365068 96 ntBASIC-0.56□□□□□ -2.5
SPTA1P02549 RNU6-934P-201ENST00000365154 107 ntBASIC-0.56□□□□□ -2.5
SPTA1P02549 RNU6-47P-201ENST00000383866 107 ntBASIC-0.56□□□□□ -2.5
SPTA1P02549 RNU6-24P-201ENST00000384440 107 ntBASIC-0.56□□□□□ -2.5
SPTA1P02549 MIR516B2-201ENST00000385190 85 ntBASIC-0.56□□□□□ -2.5
SPTA1P02549 SNORA3B-201ENST00000391305 131 ntBASIC-0.56□□□□□ -2.5
SPTA1P02549 AC244250.2-201ENST00000418731 148 ntBASIC-0.56□□□□□ -2.5
SPTA1P02549 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC-0.56□□□□□ -2.5
SPTA1P02549 RNU6-583P-201ENST00000516012 92 ntBASIC-0.56□□□□□ -2.5
SPTA1P02549 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.56□□□□□ -2.5
SPTA1P02549 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.56□□□□□ -2.5
SPTA1P02549 AC090897.1-201ENST00000580909 226 ntBASIC-0.56□□□□□ -2.5
SPTA1P02549 AC012433.1-201ENST00000588916 398 ntBASIC-0.56□□□□□ -2.5
SPTA1P02549 AC090186.1-201ENST00000605991 572 ntBASIC-0.56□□□□□ -2.5
SPTA1P02549 RNU6-88P-201ENST00000606801 100 ntBASIC-0.56□□□□□ -2.5
SPTA1P02549 AC010999.1-201ENST00000611856 324 ntBASIC-0.56□□□□□ -2.5
SPTA1P02549 uc_338.28-201ENST00000612082 187 ntBASIC-0.56□□□□□ -2.5
SPTA1P02549 AC010608.3-201ENST00000625048 527 ntBASIC-0.56□□□□□ -2.5
SPTA1P02549 MIR1322-201ENST00000638013 71 ntBASIC-0.56□□□□□ -2.5
SPTA1P02549 RNU6-1240P-201ENST00000365155 104 ntBASIC-0.56□□□□□ -2.5
SPTA1P02549 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.56□□□□□ -2.5
SPTA1P02549 MIR196A1-201ENST00000388006 70 ntBASIC-0.56□□□□□ -2.5
SPTA1P02549 AL136310.1-201ENST00000404926 654 ntBASIC-0.56□□□□□ -2.5
SPTA1P02549 MIR1185-2-201ENST00000408687 86 ntBASIC-0.56□□□□□ -2.5
SPTA1P02549 HLA-S-202ENST00000425174 53 ntBASIC-0.56□□□□□ -2.5
SPTA1P02549 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC-0.56□□□□□ -2.5
SPTA1P02549 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC-0.56□□□□□ -2.5
SPTA1P02549 SNRPGP7-201ENST00000469016 106 ntBASIC-0.56□□□□□ -2.5
SPTA1P02549 AC046134.1-201ENST00000514454 666 ntBASIC-0.56□□□□□ -2.5
SPTA1P02549 AC040926.1-201ENST00000530195 238 ntBASIC-0.56□□□□□ -2.5
SPTA1P02549 Y_RNA.403-201ENST00000383977 101 ntBASIC-0.57□□□□□ -2.5
SPTA1P02549 RNU6-975P-201ENST00000384296 105 ntBASIC-0.57□□□□□ -2.5
SPTA1P02549 RNU6-1179P-201ENST00000384667 107 ntBASIC-0.57□□□□□ -2.5
SPTA1P02549 MIR496-201ENST00000385226 102 ntBASIC-0.57□□□□□ -2.5
SPTA1P02549 AC025647.1-201ENST00000517879 253 ntBASIC-0.57□□□□□ -2.5
SPTA1P02549 EIF1AXP2-201ENST00000555940 413 ntBASIC-0.57□□□□□ -2.5
SPTA1P02549 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC-0.57□□□□□ -2.5
SPTA1P02549 MIR562-201ENST00000384894 95 ntBASIC-0.57□□□□□ -2.5
SPTA1P02549 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC-0.57□□□□□ -2.5
SPTA1P02549 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC-0.57□□□□□ -2.5
SPTA1P02549 AC022447.4-201ENST00000504053 364 ntBASIC-0.57□□□□□ -2.5
SPTA1P02549 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.57□□□□□ -2.5
SPTA1P02549 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC-0.57□□□□□ -2.5
SPTA1P02549 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC-0.57□□□□□ -2.5
SPTA1P02549 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC-0.57□□□□□ -2.5
SPTA1P02549 AC139792.3-201ENST00000623525 224 ntBASIC-0.57□□□□□ -2.5
SPTA1P02549 AL008636.1-201ENST00000625038 1018 ntBASIC-0.57□□□□□ -2.5
SPTA1P02549 RNU6-490P-201ENST00000362985 107 ntBASIC-0.58□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms