Protein–RNA interactions for Protein: O95639

CPSF4, Cleavage and polyadenylation specificity factor subunit 4, humanhuman

Known RBP Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4O95639 SNORD5.1-201ENST00000458800 75 ntBASIC0.66□□□□□ -2.3
CPSF4O95639 RPS29P25-201ENST00000481709 171 ntBASIC0.66□□□□□ -2.3
CPSF4O95639 AC018710.1-201ENST00000506509 158 ntBASIC0.66□□□□□ -2.3
CPSF4O95639 AC097462.1-201ENST00000514125 324 ntBASIC0.66□□□□□ -2.3
CPSF4O95639 AC046134.1-201ENST00000514454 666 ntBASIC0.66□□□□□ -2.3
CPSF4O95639 RNU4-49P-201ENST00000516080 140 ntBASIC0.66□□□□□ -2.3
CPSF4O95639 RNU6-720P-201ENST00000516363 108 ntBASIC0.66□□□□□ -2.3
CPSF4O95639 RNA5SP168-201ENST00000516642 112 ntBASIC0.66□□□□□ -2.3
CPSF4O95639 RNU7-172P-201ENST00000517125 64 ntBASIC0.66□□□□□ -2.3
CPSF4O95639 CYCSP23-201ENST00000519781 313 ntBASIC0.66□□□□□ -2.3
CPSF4O95639 EIF1P4-201ENST00000572664 335 ntBASIC0.66□□□□□ -2.3
CPSF4O95639 MIR4790-201ENST00000577799 79 ntBASIC0.66□□□□□ -2.3
CPSF4O95639 AC125232.2-201ENST00000592457 143 ntBASIC0.66□□□□□ -2.3
CPSF4O95639 MIR6835-201ENST00000621552 64 ntBASIC0.66□□□□□ -2.3
CPSF4O95639 MTND5P16-201ENST00000460269 1703 ntBASIC0.66□□□□□ -2.3
CPSF4O95639 MIR96-201ENST00000362288 78 ntBASIC0.65□□□□□ -2.31
CPSF4O95639 RNU6-623P-201ENST00000363143 105 ntBASIC0.65□□□□□ -2.31
CPSF4O95639 Y_RNA.473-201ENST00000384333 102 ntBASIC0.65□□□□□ -2.31
CPSF4O95639 Y_RNA.516-201ENST00000384541 124 ntBASIC0.65□□□□□ -2.31
CPSF4O95639 Y_RNA.573-201ENST00000384763 105 ntBASIC0.65□□□□□ -2.31
CPSF4O95639 MIR329-1-201ENST00000385028 80 ntBASIC0.65□□□□□ -2.31
CPSF4O95639 RNU6ATAC15P-201ENST00000408279 121 ntBASIC0.65□□□□□ -2.31
CPSF4O95639 ELOCP21-201ENST00000412558 336 ntBASIC0.65□□□□□ -2.31
CPSF4O95639 MTCO3P19-201ENST00000415864 321 ntBASIC0.65□□□□□ -2.31
CPSF4O95639 EIF1P2-201ENST00000428233 350 ntBASIC0.65□□□□□ -2.31
CPSF4O95639 CALM2P4-201ENST00000430810 426 ntBASIC0.65□□□□□ -2.31
CPSF4O95639 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC0.65□□□□□ -2.31
CPSF4O95639 UBL5P1-201ENST00000507979 193 ntBASIC0.65□□□□□ -2.31
CPSF4O95639 SNORA31.2-201ENST00000516019 134 ntBASIC0.65□□□□□ -2.31
CPSF4O95639 SNORA70.22-201ENST00000517160 124 ntBASIC0.65□□□□□ -2.31
CPSF4O95639 DEFB108E-201ENST00000524692 240 ntBASIC0.65□□□□□ -2.31
CPSF4O95639 AL121579.1-201ENST00000555129 305 ntBASIC0.65□□□□□ -2.31
CPSF4O95639 AC090617.3-201ENST00000573670 475 ntBASIC0.65□□□□□ -2.31
CPSF4O95639 MIR5701-3-201ENST00000578890 82 ntBASIC0.65□□□□□ -2.31
CPSF4O95639 MIR5701-1-201ENST00000585138 82 ntBASIC0.65□□□□□ -2.31
CPSF4O95639 SNORA28-201ENST00000606769 126 ntBASIC0.65□□□□□ -2.31
CPSF4O95639 AL357075.2-201ENST00000614906 189 ntBASIC0.65□□□□□ -2.31
CPSF4O95639 MIR5701-2-201ENST00000615634 82 ntBASIC0.65□□□□□ -2.31
CPSF4O95639 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.65□□□□□ -2.31
CPSF4O95639 RNU6-199P-201ENST00000362954 107 ntBASIC0.64□□□□□ -2.31
CPSF4O95639 Y_RNA.265-201ENST00000364677 108 ntBASIC0.64□□□□□ -2.31
CPSF4O95639 RNU6-1264P-201ENST00000383891 107 ntBASIC0.64□□□□□ -2.31
CPSF4O95639 Y_RNA.453-201ENST00000384223 109 ntBASIC0.64□□□□□ -2.31
CPSF4O95639 RNU6-424P-201ENST00000384367 105 ntBASIC0.64□□□□□ -2.31
CPSF4O95639 MIR653-201ENST00000385279 96 ntBASIC0.64□□□□□ -2.31
CPSF4O95639 SNORD41-201ENST00000386967 70 ntBASIC0.64□□□□□ -2.31
CPSF4O95639 SNORD115-47-201ENST00000391226 86 ntBASIC0.64□□□□□ -2.31
CPSF4O95639 U8.16-201ENST00000391279 133 ntBASIC0.64□□□□□ -2.31
CPSF4O95639 MIR190B-201ENST00000401119 79 ntBASIC0.64□□□□□ -2.31
CPSF4O95639 AL139396.1-201ENST00000421137 167 ntBASIC0.64□□□□□ -2.31
CPSF4O95639 UQCRBP2-201ENST00000447827 297 ntBASIC0.64□□□□□ -2.31
CPSF4O95639 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.64□□□□□ -2.31
CPSF4O95639 AC093850.1-201ENST00000454121 251 ntBASIC0.64□□□□□ -2.31
CPSF4O95639 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.64□□□□□ -2.31
CPSF4O95639 AC091021.1-201ENST00000468051 388 ntBASIC0.64□□□□□ -2.31
CPSF4O95639 AC048334.1-201ENST00000477975 159 ntBASIC0.64□□□□□ -2.31
CPSF4O95639 OR9P1P-201ENST00000496431 281 ntBASIC0.64□□□□□ -2.31
CPSF4O95639 MTND5P5-201ENST00000503764 376 ntBASIC0.64□□□□□ -2.31
CPSF4O95639 AC105758.1-201ENST00000506038 399 ntBASIC0.64□□□□□ -2.31
CPSF4O95639 RNU6-917P-201ENST00000516294 104 ntBASIC0.64□□□□□ -2.31
CPSF4O95639 Y_RNA.682-201ENST00000516457 100 ntBASIC0.64□□□□□ -2.31
CPSF4O95639 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC0.64□□□□□ -2.31
CPSF4O95639 AC136932.1-201ENST00000574771 208 ntBASIC0.64□□□□□ -2.31
CPSF4O95639 AC211469.2-201ENST00000605461 205 ntBASIC0.64□□□□□ -2.31
CPSF4O95639 AC005014.2-201ENST00000607795 599 ntBASIC0.64□□□□□ -2.31
CPSF4O95639 GHRLOS.1-201ENST00000610995 70 ntBASIC0.64□□□□□ -2.31
CPSF4O95639 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.64□□□□□ -2.31
CPSF4O95639 AC093913.1-201ENST00000614178 329 ntBASIC0.64□□□□□ -2.31
CPSF4O95639 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC0.64□□□□□ -2.31
CPSF4O95639 MIR3688-2-201ENST00000636963 87 ntBASIC0.64□□□□□ -2.31
CPSF4O95639 RNU6-874P-201ENST00000362390 105 ntBASIC0.63□□□□□ -2.31
CPSF4O95639 RNA5SP361-201ENST00000362686 118 ntBASIC0.63□□□□□ -2.31
CPSF4O95639 Y_RNA.267-201ENST00000364679 109 ntBASIC0.63□□□□□ -2.31
CPSF4O95639 Y_RNA.318-201ENST00000365131 97 ntBASIC0.63□□□□□ -2.31
CPSF4O95639 RNU6-407P-201ENST00000365280 104 ntBASIC0.63□□□□□ -2.31
CPSF4O95639 Y_RNA.338-201ENST00000365320 114 ntBASIC0.63□□□□□ -2.31
CPSF4O95639 RNU6-1145P-201ENST00000384246 107 ntBASIC0.63□□□□□ -2.31
CPSF4O95639 RNU6-910P-201ENST00000390844 107 ntBASIC0.63□□□□□ -2.31
CPSF4O95639 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.63□□□□□ -2.31
CPSF4O95639 RNU6-1054P-201ENST00000411293 104 ntBASIC0.63□□□□□ -2.31
CPSF4O95639 AC018865.2-201ENST00000423631 129 ntBASIC0.63□□□□□ -2.31
CPSF4O95639 AC004941.2-201ENST00000427009 228 ntBASIC0.63□□□□□ -2.31
CPSF4O95639 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC0.63□□□□□ -2.31
CPSF4O95639 AC105313.1-201ENST00000509121 353 ntBASIC0.63□□□□□ -2.31
CPSF4O95639 AC026782.1-201ENST00000512952 449 ntBASIC0.63□□□□□ -2.31
CPSF4O95639 RNA5SP20-201ENST00000515976 84 ntBASIC0.63□□□□□ -2.31
CPSF4O95639 RN7SKP49-201ENST00000516675 260 ntBASIC0.63□□□□□ -2.31
CPSF4O95639 AC090049.2-201ENST00000550377 109 ntBASIC0.63□□□□□ -2.31
CPSF4O95639 RPL21P9-201ENST00000556149 474 ntBASIC0.63□□□□□ -2.31
CPSF4O95639 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC0.63□□□□□ -2.31
CPSF4O95639 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.63□□□□□ -2.31
CPSF4O95639 AC091178.2-201ENST00000584401 117 ntBASIC0.63□□□□□ -2.31
CPSF4O95639 AC080078.2-201ENST00000603766 501 ntBASIC0.63□□□□□ -2.31
CPSF4O95639 AC018462.2-201ENST00000605375 395 ntBASIC0.63□□□□□ -2.31
CPSF4O95639 AC016727.1-205ENST00000605437 569 ntBASIC0.63□□□□□ -2.31
CPSF4O95639 AC108706.1-201ENST00000611053 297 ntBASIC0.63□□□□□ -2.31
CPSF4O95639 U4.5-201ENST00000617137 123 ntBASIC0.63□□□□□ -2.31
CPSF4O95639 AC005592.1-201ENST00000566527 1640 ntBASIC0.63□□□□□ -2.31
CPSF4O95639 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.63□□□□□ -2.31
CPSF4O95639 AC073544.1-201ENST00000600110 1595 ntBASIC0.62□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 122.1 ms