Protein–RNA interactions for Protein: O95343

SIX3, Homeobox protein SIX3, humanhuman

Predicted RBP Predictions only

Length 332 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3O95343 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
SIX3O95343 SNORD1A-201ENST00000364968 72 ntBASIC1.51□□□□□ -2.17
SIX3O95343 Y_RNA.393-201ENST00000383936 102 ntBASIC1.51□□□□□ -2.17
SIX3O95343 RNU6-203P-201ENST00000384038 104 ntBASIC1.51□□□□□ -2.17
SIX3O95343 RNU11-5P-201ENST00000391216 129 ntBASIC1.51□□□□□ -2.17
SIX3O95343 MIR1323-201ENST00000408090 73 ntBASIC1.51□□□□□ -2.17
SIX3O95343 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC1.51□□□□□ -2.17
SIX3O95343 MTND1P2-201ENST00000430604 821 ntBASIC1.51□□□□□ -2.17
SIX3O95343 AL135790.2-201ENST00000437701 267 ntBASIC1.51□□□□□ -2.17
SIX3O95343 AC010469.2-201ENST00000496412 480 ntBASIC1.51□□□□□ -2.17
SIX3O95343 AK6P2-201ENST00000549020 471 ntBASIC1.51□□□□□ -2.17
SIX3O95343 AC040896.1-201ENST00000613819 479 ntBASIC1.51□□□□□ -2.17
SIX3O95343 AC104260.1-201ENST00000616660 539 ntBASIC1.51□□□□□ -2.17
SIX3O95343 Y_RNA.557-201ENST00000384680 107 ntBASIC1.5□□□□□ -2.17
SIX3O95343 MIR513A1-201ENST00000385138 129 ntBASIC1.5□□□□□ -2.17
SIX3O95343 MIR320A-201ENST00000385302 82 ntBASIC1.5□□□□□ -2.17
SIX3O95343 MT-TL1-201ENST00000386347 75 ntBASIC1.5□□□□□ -2.17
SIX3O95343 AC114482.1-201ENST00000418010 247 ntBASIC1.5□□□□□ -2.17
SIX3O95343 MIR2053-201ENST00000459295 91 ntBASIC1.5□□□□□ -2.17
SIX3O95343 RNU7-94P-201ENST00000459576 63 ntBASIC1.5□□□□□ -2.17
SIX3O95343 RPL17P19-201ENST00000489069 552 ntBASIC1.5□□□□□ -2.17
SIX3O95343 RNU7-99P-201ENST00000516271 62 ntBASIC1.5□□□□□ -2.17
SIX3O95343 AC105029.1-201ENST00000520250 669 ntBASIC1.5□□□□□ -2.17
SIX3O95343 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.5□□□□□ -2.17
SIX3O95343 RPL21P9-201ENST00000556149 474 ntBASIC1.5□□□□□ -2.17
SIX3O95343 FRG2DP-202ENST00000566967 323 ntBASIC1.5□□□□□ -2.17
SIX3O95343 MIR5701-3-201ENST00000578890 82 ntBASIC1.5□□□□□ -2.17
SIX3O95343 MIR5701-1-201ENST00000585138 82 ntBASIC1.5□□□□□ -2.17
SIX3O95343 MIR1244-1-201ENST00000612829 85 ntBASIC1.5□□□□□ -2.17
SIX3O95343 MIR5701-2-201ENST00000615634 82 ntBASIC1.5□□□□□ -2.17
SIX3O95343 U6.73-201ENST00000619194 103 ntBASIC1.5□□□□□ -2.17
SIX3O95343 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.5□□□□□ -2.17
SIX3O95343 MIR1244-3-201ENST00000635744 85 ntBASIC1.5□□□□□ -2.17
SIX3O95343 MIR1244-2-201ENST00000636449 85 ntBASIC1.5□□□□□ -2.17
SIX3O95343 AL669831.3-213ENST00000636676 183 ntBASIC1.5□□□□□ -2.17
SIX3O95343 MIR1244-4-202ENST00000636813 85 ntBASIC1.5□□□□□ -2.17
SIX3O95343 AC073544.1-201ENST00000600110 1595 ntBASIC1.5□□□□□ -2.17
SIX3O95343 Y_RNA.339-201ENST00000365325 102 ntBASIC1.49□□□□□ -2.17
SIX3O95343 Y_RNA.404-201ENST00000383978 102 ntBASIC1.49□□□□□ -2.17
SIX3O95343 Y_RNA.505-201ENST00000384489 102 ntBASIC1.49□□□□□ -2.17
SIX3O95343 MTCYBP4-201ENST00000401524 249 ntBASIC1.49□□□□□ -2.17
SIX3O95343 MIR1304-201ENST00000408243 91 ntBASIC1.49□□□□□ -2.17
SIX3O95343 RNA5SP475-201ENST00000410568 110 ntBASIC1.49□□□□□ -2.17
SIX3O95343 RNU6-370P-201ENST00000411008 104 ntBASIC1.49□□□□□ -2.17
SIX3O95343 EIF1P2-201ENST00000428233 350 ntBASIC1.49□□□□□ -2.17
SIX3O95343 AC009474.2-201ENST00000451383 136 ntBASIC1.49□□□□□ -2.17
SIX3O95343 SNORD65B-201ENST00000459126 73 ntBASIC1.49□□□□□ -2.17
SIX3O95343 MTND4P17-201ENST00000470444 350 ntBASIC1.49□□□□□ -2.17
SIX3O95343 AC010598.1-201ENST00000510378 103 ntBASIC1.49□□□□□ -2.17
SIX3O95343 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC1.49□□□□□ -2.17
SIX3O95343 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.49□□□□□ -2.17
SIX3O95343 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.49□□□□□ -2.17
SIX3O95343 TPTEP1-208ENST00000636884 213 ntBASIC1.49□□□□□ -2.17
SIX3O95343 RNA5SP361-201ENST00000362686 118 ntBASIC1.48□□□□□ -2.17
SIX3O95343 RNU4-41P-201ENST00000364426 143 ntBASIC1.48□□□□□ -2.17
SIX3O95343 RNU6-407P-201ENST00000365280 104 ntBASIC1.48□□□□□ -2.17
SIX3O95343 RNU6-1264P-201ENST00000383891 107 ntBASIC1.48□□□□□ -2.17
SIX3O95343 MRPL42P3-201ENST00000401492 326 ntBASIC1.48□□□□□ -2.17
SIX3O95343 Y_RNA.599-201ENST00000410489 109 ntBASIC1.48□□□□□ -2.17
SIX3O95343 SNX2P2-201ENST00000424553 323 ntBASIC1.48□□□□□ -2.17
SIX3O95343 MRPS10P1-201ENST00000448483 130 ntBASIC1.48□□□□□ -2.17
SIX3O95343 PCNPP5-201ENST00000452246 481 ntBASIC1.48□□□□□ -2.17
SIX3O95343 AC023790.1-201ENST00000482174 347 ntBASIC1.48□□□□□ -2.17
SIX3O95343 AC116353.2-201ENST00000505332 712 ntBASIC1.48□□□□□ -2.17
SIX3O95343 RNU6-1213P-201ENST00000517075 94 ntBASIC1.48□□□□□ -2.17
SIX3O95343 RNU6-1223P-201ENST00000517124 104 ntBASIC1.48□□□□□ -2.17
SIX3O95343 MIR5690-201ENST00000583739 73 ntBASIC1.48□□□□□ -2.17
SIX3O95343 AC125232.2-201ENST00000592457 143 ntBASIC1.48□□□□□ -2.17
SIX3O95343 AL021879.1-201ENST00000611756 288 ntBASIC1.48□□□□□ -2.17
SIX3O95343 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
SIX3O95343 MTND5P10-201ENST00000603719 1809 ntBASIC1.47□□□□□ -2.17
SIX3O95343 RNU6-99P-201ENST00000364721 107 ntBASIC1.47□□□□□ -2.17
SIX3O95343 MIR329-1-201ENST00000385028 80 ntBASIC1.47□□□□□ -2.17
SIX3O95343 AL034345.1-201ENST00000407768 123 ntBASIC1.47□□□□□ -2.17
SIX3O95343 RNU6-625P-201ENST00000459412 107 ntBASIC1.47□□□□□ -2.17
SIX3O95343 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.47□□□□□ -2.17
SIX3O95343 RNU6-902P-201ENST00000517212 91 ntBASIC1.47□□□□□ -2.17
SIX3O95343 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.47□□□□□ -2.17
SIX3O95343 MIR3684-201ENST00000579779 74 ntBASIC1.47□□□□□ -2.17
SIX3O95343 AC073413.2-201ENST00000604332 360 ntBASIC1.47□□□□□ -2.17
SIX3O95343 MIR8054-201ENST00000620877 86 ntBASIC1.47□□□□□ -2.17
SIX3O95343 AC006435.5-201ENST00000624486 112 ntBASIC1.47□□□□□ -2.17
SIX3O95343 AL161722.3-201ENST00000605789 2983 ntBASIC1.47□□□□□ -2.17
SIX3O95343 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
SIX3O95343 RNU6-1123P-201ENST00000362347 106 ntBASIC1.46□□□□□ -2.18
SIX3O95343 Y_RNA.279-201ENST00000364763 95 ntBASIC1.46□□□□□ -2.18
SIX3O95343 RNU6-440P-201ENST00000390882 105 ntBASIC1.46□□□□□ -2.18
SIX3O95343 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.46□□□□□ -2.18
SIX3O95343 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.46□□□□□ -2.18
SIX3O95343 AL606517.2-201ENST00000442855 241 ntBASIC1.46□□□□□ -2.18
SIX3O95343 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC1.46□□□□□ -2.18
SIX3O95343 AC074133.1-201ENST00000515696 183 ntBASIC1.46□□□□□ -2.18
SIX3O95343 RNU7-172P-201ENST00000517125 64 ntBASIC1.46□□□□□ -2.18
SIX3O95343 SUMO2P16-201ENST00000519475 264 ntBASIC1.46□□□□□ -2.18
SIX3O95343 AC122108.2-201ENST00000611946 526 ntBASIC1.46□□□□□ -2.18
SIX3O95343 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
SIX3O95343 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.46□□□□□ -2.18
SIX3O95343 Y_RNA.166-201ENST00000363730 102 ntBASIC1.45□□□□□ -2.18
SIX3O95343 RNU6-376P-201ENST00000384731 106 ntBASIC1.45□□□□□ -2.18
SIX3O95343 RNU6-1031P-201ENST00000384773 107 ntBASIC1.45□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms