Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 AC092447.3-201ENST00000426027 686 ntBASIC-0.55□□□□□ -2.5
USH2AO75445 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC-0.55□□□□□ -2.5
USH2AO75445 AC079610.2-201ENST00000604818 690 ntBASIC-0.55□□□□□ -2.5
USH2AO75445 Y_RNA.31-201ENST00000362574 102 ntBASIC-0.55□□□□□ -2.5
USH2AO75445 RNA5SP48-201ENST00000363969 126 ntBASIC-0.55□□□□□ -2.5
USH2AO75445 RNU6-1130P-201ENST00000365434 107 ntBASIC-0.55□□□□□ -2.5
USH2AO75445 RNU6-1292P-201ENST00000383856 107 ntBASIC-0.55□□□□□ -2.5
USH2AO75445 RNU6-400P-201ENST00000391173 106 ntBASIC-0.55□□□□□ -2.5
USH2AO75445 ACA59.2-201ENST00000517061 156 ntBASIC-0.55□□□□□ -2.5
USH2AO75445 MIR4804-201ENST00000581683 73 ntBASIC-0.55□□□□□ -2.5
USH2AO75445 Y_RNA.79-201ENST00000362992 113 ntBASIC-0.56□□□□□ -2.5
USH2AO75445 SNORA4.2-201ENST00000365313 147 ntBASIC-0.56□□□□□ -2.5
USH2AO75445 RNU6-841P-201ENST00000383872 107 ntBASIC-0.56□□□□□ -2.5
USH2AO75445 RNU6-741P-201ENST00000383889 107 ntBASIC-0.56□□□□□ -2.5
USH2AO75445 MTND4P11-201ENST00000417020 1058 ntBASIC-0.56□□□□□ -2.5
USH2AO75445 AP002001.1-203ENST00000534002 267 ntBASIC-0.56□□□□□ -2.5
USH2AO75445 TUG1_4.1-201ENST00000619464 181 ntBASIC-0.56□□□□□ -2.5
USH2AO75445 RNU6-1243P-201ENST00000364028 107 ntBASIC-0.56□□□□□ -2.5
USH2AO75445 RNU6-1274P-201ENST00000384557 107 ntBASIC-0.56□□□□□ -2.5
USH2AO75445 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC-0.56□□□□□ -2.5
USH2AO75445 RNU6-333P-201ENST00000459117 107 ntBASIC-0.56□□□□□ -2.5
USH2AO75445 AC010468.3-201ENST00000508225 458 ntBASIC-0.56□□□□□ -2.5
USH2AO75445 RNU6-1232P-201ENST00000516299 86 ntBASIC-0.56□□□□□ -2.5
USH2AO75445 AC093249.1-201ENST00000567049 203 ntBASIC-0.56□□□□□ -2.5
USH2AO75445 RNU6-140P-201ENST00000384566 108 ntBASIC-0.56□□□□□ -2.5
USH2AO75445 U8.16-201ENST00000391279 133 ntBASIC-0.56□□□□□ -2.5
USH2AO75445 AL050341.1-201ENST00000447743 313 ntBASIC-0.56□□□□□ -2.5
USH2AO75445 MTND2P33-201ENST00000506452 1031 ntBASIC-0.56□□□□□ -2.5
USH2AO75445 AC090049.2-201ENST00000550377 109 ntBASIC-0.56□□□□□ -2.5
USH2AO75445 AC124947.2-202ENST00000552735 133 ntBASIC-0.56□□□□□ -2.5
USH2AO75445 AC245014.2-201ENST00000603689 287 ntBASIC-0.56□□□□□ -2.5
USH2AO75445 SNORD115-40-201ENST00000606510 82 ntBASIC-0.56□□□□□ -2.5
USH2AO75445 RNU6-726P-201ENST00000364680 107 ntBASIC-0.56□□□□□ -2.5
USH2AO75445 MIR588-201ENST00000384900 83 ntBASIC-0.56□□□□□ -2.5
USH2AO75445 CDK8P2-201ENST00000415020 547 ntBASIC-0.56□□□□□ -2.5
USH2AO75445 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC-0.56□□□□□ -2.5
USH2AO75445 RNY4P25-201ENST00000459254 96 ntBASIC-0.56□□□□□ -2.5
USH2AO75445 RNA5SP20-201ENST00000515976 84 ntBASIC-0.56□□□□□ -2.5
USH2AO75445 AL445435.1-201ENST00000604232 665 ntBASIC-0.56□□□□□ -2.5
USH2AO75445 AC009269.6-201ENST00000621778 588 ntBASIC-0.56□□□□□ -2.5
USH2AO75445 AC006927.4-201ENST00000639187 543 ntBASIC-0.56□□□□□ -2.5
USH2AO75445 PMCHL1-202ENST00000423102 261 ntBASIC-0.57□□□□□ -2.5
USH2AO75445 SNORA25.11-201ENST00000515935 105 ntBASIC-0.57□□□□□ -2.5
USH2AO75445 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC-0.57□□□□□ -2.5
USH2AO75445 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC-0.57□□□□□ -2.5
USH2AO75445 AC121247.2-201ENST00000604776 136 ntBASIC-0.57□□□□□ -2.5
USH2AO75445 SNORA70.25-201ENST00000612741 95 ntBASIC-0.57□□□□□ -2.5
USH2AO75445 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC-0.57□□□□□ -2.5
USH2AO75445 AC132825.7-201ENST00000638744 335 ntBASIC-0.57□□□□□ -2.5
USH2AO75445 Y_RNA.51-201ENST00000362725 102 ntBASIC-0.57□□□□□ -2.5
USH2AO75445 RNU6-944P-201ENST00000364023 107 ntBASIC-0.57□□□□□ -2.5
USH2AO75445 Y_RNA.222-201ENST00000364264 102 ntBASIC-0.57□□□□□ -2.5
USH2AO75445 AC106883.1-201ENST00000418805 562 ntBASIC-0.57□□□□□ -2.5
USH2AO75445 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC-0.57□□□□□ -2.5
USH2AO75445 RNU6-720P-201ENST00000516363 108 ntBASIC-0.57□□□□□ -2.5
USH2AO75445 MIR3136-201ENST00000583498 78 ntBASIC-0.57□□□□□ -2.5
USH2AO75445 BNIP3P30-201ENST00000601184 574 ntBASIC-0.57□□□□□ -2.5
USH2AO75445 MTND2P41-201ENST00000637599 773 ntBASIC-0.57□□□□□ -2.5
USH2AO75445 SNORA18-201ENST00000384416 132 ntBASIC-0.57□□□□□ -2.5
USH2AO75445 MIRLET7F2-201ENST00000385277 83 ntBASIC-0.57□□□□□ -2.5
USH2AO75445 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC-0.57□□□□□ -2.5
USH2AO75445 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC-0.57□□□□□ -2.5
USH2AO75445 MIR4742-201ENST00000581069 85 ntBASIC-0.57□□□□□ -2.5
USH2AO75445 AC008752.3-201ENST00000588113 712 ntBASIC-0.57□□□□□ -2.5
USH2AO75445 RNU1-29P-201ENST00000606574 126 ntBASIC-0.57□□□□□ -2.5
USH2AO75445 AC080013.3-201ENST00000606839 578 ntBASIC-0.57□□□□□ -2.5
USH2AO75445 AC097460.3-201ENST00000623099 442 ntBASIC-0.57□□□□□ -2.5
USH2AO75445 USP9YP14-201ENST00000430663 563 ntBASIC-0.58□□□□□ -2.5
USH2AO75445 SUMO1P3-201ENST00000439961 304 ntBASIC-0.58□□□□□ -2.5
USH2AO75445 AP000870.1-201ENST00000472927 406 ntBASIC-0.58□□□□□ -2.5
USH2AO75445 AC107401.1-201ENST00000503426 685 ntBASIC-0.58□□□□□ -2.5
USH2AO75445 AC046134.1-201ENST00000514454 666 ntBASIC-0.58□□□□□ -2.5
USH2AO75445 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC-0.58□□□□□ -2.5
USH2AO75445 AC018630.3-201ENST00000542637 96 ntBASIC-0.58□□□□□ -2.5
USH2AO75445 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC-0.58□□□□□ -2.5
USH2AO75445 AL022067.1-201ENST00000602426 454 ntBASIC-0.58□□□□□ -2.5
USH2AO75445 AC025588.3-201ENST00000604182 274 ntBASIC-0.58□□□□□ -2.5
USH2AO75445 AC090772.4-201ENST00000623599 362 ntBASIC-0.58□□□□□ -2.5
USH2AO75445 MIR6874-201ENST00000635894 71 ntBASIC-0.58□□□□□ -2.5
USH2AO75445 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC-0.58□□□□□ -2.5
USH2AO75445 RNU6-1010P-201ENST00000362757 107 ntBASIC-0.58□□□□□ -2.5
USH2AO75445 RNU6-199P-201ENST00000362954 107 ntBASIC-0.58□□□□□ -2.5
USH2AO75445 snoZ40.1-201ENST00000364540 72 ntBASIC-0.58□□□□□ -2.5
USH2AO75445 AC098614.3-201ENST00000438957 440 ntBASIC-0.58□□□□□ -2.5
USH2AO75445 snoU13.27-201ENST00000459278 104 ntBASIC-0.58□□□□□ -2.5
USH2AO75445 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC-0.58□□□□□ -2.5
USH2AO75445 AC005771.1-201ENST00000585581 349 ntBASIC-0.58□□□□□ -2.5
USH2AO75445 U2.21-201ENST00000637295 81 ntBASIC-0.58□□□□□ -2.5
USH2AO75445 RNU6-545P-201ENST00000362681 104 ntBASIC-0.58□□□□□ -2.5
USH2AO75445 RNU6-1048P-201ENST00000364054 107 ntBASIC-0.58□□□□□ -2.5
USH2AO75445 RNU2-51P-201ENST00000410708 197 ntBASIC-0.58□□□□□ -2.5
USH2AO75445 AC018880.2-201ENST00000414265 201 ntBASIC-0.58□□□□□ -2.5
USH2AO75445 RNU6-1194P-201ENST00000516208 104 ntBASIC-0.58□□□□□ -2.5
USH2AO75445 RNU6-63P-201ENST00000516690 95 ntBASIC-0.58□□□□□ -2.5
USH2AO75445 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC-0.58□□□□□ -2.5
USH2AO75445 MIR4771-2-201ENST00000577758 74 ntBASIC-0.58□□□□□ -2.5
USH2AO75445 MIR4771-1-201ENST00000582617 74 ntBASIC-0.58□□□□□ -2.5
USH2AO75445 MIR5704-201ENST00000584029 77 ntBASIC-0.58□□□□□ -2.5
USH2AO75445 Y_RNA.171-201ENST00000363760 102 ntBASIC-0.58□□□□□ -2.5
USH2AO75445 RNU6-900P-201ENST00000384498 102 ntBASIC-0.58□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 121.1 ms