Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.5□□□□□ -2.01
VPS4BO75351 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.5□□□□□ -2.01
VPS4BO75351 RNA5SP282-201ENST00000516355 108 ntBASIC2.5□□□□□ -2.01
VPS4BO75351 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.5□□□□□ -2.01
VPS4BO75351 AL049779.4-201ENST00000604500 156 ntBASIC2.5□□□□□ -2.01
VPS4BO75351 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
VPS4BO75351 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
VPS4BO75351 RNU1-112P-201ENST00000364401 164 ntBASIC2.49□□□□□ -2.01
VPS4BO75351 RNU6-200P-201ENST00000364743 107 ntBASIC2.49□□□□□ -2.01
VPS4BO75351 RNA5SP181-201ENST00000410246 98 ntBASIC2.49□□□□□ -2.01
VPS4BO75351 RNU6-57P-201ENST00000411348 103 ntBASIC2.49□□□□□ -2.01
VPS4BO75351 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.49□□□□□ -2.01
VPS4BO75351 AC016909.1-201ENST00000415916 166 ntBASIC2.49□□□□□ -2.01
VPS4BO75351 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.49□□□□□ -2.01
VPS4BO75351 SNORD65B-201ENST00000459126 73 ntBASIC2.49□□□□□ -2.01
VPS4BO75351 COX6CP14-201ENST00000469580 174 ntBASIC2.49□□□□□ -2.01
VPS4BO75351 AC010598.1-201ENST00000510378 103 ntBASIC2.49□□□□□ -2.01
VPS4BO75351 RNU6-856P-201ENST00000516959 98 ntBASIC2.49□□□□□ -2.01
VPS4BO75351 RNU1-104P-201ENST00000517280 175 ntBASIC2.49□□□□□ -2.01
VPS4BO75351 AL512605.2-201ENST00000592972 256 ntBASIC2.49□□□□□ -2.01
VPS4BO75351 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.49□□□□□ -2.01
VPS4BO75351 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC2.49□□□□□ -2.01
VPS4BO75351 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
VPS4BO75351 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
VPS4BO75351 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
VPS4BO75351 SNORA20B-201ENST00000384220 132 ntBASIC2.48□□□□□ -2.01
VPS4BO75351 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
VPS4BO75351 RNU6-710P-201ENST00000410424 105 ntBASIC2.48□□□□□ -2.01
VPS4BO75351 RNU6-651P-201ENST00000411040 105 ntBASIC2.48□□□□□ -2.01
VPS4BO75351 RNU2-64P-201ENST00000411315 191 ntBASIC2.48□□□□□ -2.01
VPS4BO75351 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.48□□□□□ -2.01
VPS4BO75351 AL135790.2-201ENST00000437701 267 ntBASIC2.48□□□□□ -2.01
VPS4BO75351 PRELID3BP1-201ENST00000457142 540 ntBASIC2.48□□□□□ -2.01
VPS4BO75351 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
VPS4BO75351 RNU6-991P-201ENST00000516168 107 ntBASIC2.48□□□□□ -2.01
VPS4BO75351 Y_RNA.700-201ENST00000516806 100 ntBASIC2.48□□□□□ -2.01
VPS4BO75351 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.48□□□□□ -2.01
VPS4BO75351 AL078604.3-201ENST00000615580 211 ntBASIC2.48□□□□□ -2.01
VPS4BO75351 AC006435.5-201ENST00000624486 112 ntBASIC2.48□□□□□ -2.01
VPS4BO75351 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.48□□□□□ -2.01
VPS4BO75351 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
VPS4BO75351 SNORA27.1-201ENST00000362604 124 ntBASIC2.47□□□□□ -2.01
VPS4BO75351 Y_RNA.65-201ENST00000362846 100 ntBASIC2.47□□□□□ -2.01
VPS4BO75351 RNU6-324P-201ENST00000363957 106 ntBASIC2.47□□□□□ -2.01
VPS4BO75351 RNU6-743P-201ENST00000364151 106 ntBASIC2.47□□□□□ -2.01
VPS4BO75351 RNY4P28-201ENST00000365281 93 ntBASIC2.47□□□□□ -2.01
VPS4BO75351 Y_RNA.368-201ENST00000365547 113 ntBASIC2.47□□□□□ -2.01
VPS4BO75351 SNORD14D-201ENST00000384390 87 ntBASIC2.47□□□□□ -2.01
VPS4BO75351 RNU6-1289P-201ENST00000384431 106 ntBASIC2.47□□□□□ -2.01
VPS4BO75351 RNU6-1072P-201ENST00000384703 107 ntBASIC2.47□□□□□ -2.01
VPS4BO75351 RNU6-443P-201ENST00000384780 107 ntBASIC2.47□□□□□ -2.01
VPS4BO75351 MIR873-201ENST00000401120 77 ntBASIC2.47□□□□□ -2.01
VPS4BO75351 AL135786.1-201ENST00000415892 214 ntBASIC2.47□□□□□ -2.01
VPS4BO75351 AC008134.1-201ENST00000420943 193 ntBASIC2.47□□□□□ -2.01
VPS4BO75351 AC024067.1-201ENST00000426199 223 ntBASIC2.47□□□□□ -2.01
VPS4BO75351 AC009238.1-201ENST00000442165 424 ntBASIC2.47□□□□□ -2.01
VPS4BO75351 AC009237.6-201ENST00000446969 424 ntBASIC2.47□□□□□ -2.01
VPS4BO75351 RPL23AP7-203ENST00000449021 469 ntBASIC2.47□□□□□ -2.01
VPS4BO75351 snoU13.23-201ENST00000458863 104 ntBASIC2.47□□□□□ -2.01
VPS4BO75351 SNORA70.12-201ENST00000516084 153 ntBASIC2.47□□□□□ -2.01
VPS4BO75351 AC136628.3-201ENST00000521868 290 ntBASIC2.47□□□□□ -2.01
VPS4BO75351 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.47□□□□□ -2.01
VPS4BO75351 DEFB122-202ENST00000569013 197 ntBASIC2.47□□□□□ -2.01
VPS4BO75351 AC130289.1-201ENST00000577321 73 ntBASIC2.47□□□□□ -2.01
VPS4BO75351 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC2.47□□□□□ -2.01
VPS4BO75351 CTSLP2-204ENST00000629029 392 ntBASIC2.47□□□□□ -2.01
VPS4BO75351 Y_RNA.99-201ENST00000363138 105 ntBASIC2.46□□□□□ -2.02
VPS4BO75351 Y_RNA.117-201ENST00000363294 101 ntBASIC2.46□□□□□ -2.02
VPS4BO75351 RNU6-662P-201ENST00000384253 104 ntBASIC2.46□□□□□ -2.02
VPS4BO75351 Y_RNA.785-201ENST00000384290 109 ntBASIC2.46□□□□□ -2.02
VPS4BO75351 SNORA3.2-201ENST00000408221 125 ntBASIC2.46□□□□□ -2.02
VPS4BO75351 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.46□□□□□ -2.02
VPS4BO75351 RNA5SP425-201ENST00000410336 112 ntBASIC2.46□□□□□ -2.02
VPS4BO75351 CR769767.1-201ENST00000436337 346 ntBASIC2.46□□□□□ -2.02
VPS4BO75351 HSPE1P13-201ENST00000451143 297 ntBASIC2.46□□□□□ -2.02
VPS4BO75351 AL442067.1-201ENST00000613261 223 ntBASIC2.46□□□□□ -2.02
VPS4BO75351 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
VPS4BO75351 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.46□□□□□ -2.02
VPS4BO75351 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
VPS4BO75351 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.45□□□□□ -2.02
VPS4BO75351 RNU6-1272P-201ENST00000362776 107 ntBASIC2.45□□□□□ -2.02
VPS4BO75351 RNU6-801P-201ENST00000364087 105 ntBASIC2.45□□□□□ -2.02
VPS4BO75351 SNORA67.1-201ENST00000364749 141 ntBASIC2.45□□□□□ -2.02
VPS4BO75351 Y_RNA.310-201ENST00000365063 113 ntBASIC2.45□□□□□ -2.02
VPS4BO75351 RNU6-1240P-201ENST00000365155 104 ntBASIC2.45□□□□□ -2.02
VPS4BO75351 RNU1-131P-201ENST00000458943 161 ntBASIC2.45□□□□□ -2.02
VPS4BO75351 Y_RNA.637-201ENST00000459424 114 ntBASIC2.45□□□□□ -2.02
VPS4BO75351 RPS29P21-201ENST00000496272 170 ntBASIC2.45□□□□□ -2.02
VPS4BO75351 AC108210.2-201ENST00000503681 201 ntBASIC2.45□□□□□ -2.02
VPS4BO75351 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.45□□□□□ -2.02
VPS4BO75351 RNU6-138P-201ENST00000515952 107 ntBASIC2.45□□□□□ -2.02
VPS4BO75351 IGKV3-31-201ENST00000523109 329 ntBASIC2.45□□□□□ -2.02
VPS4BO75351 AC025754.2-201ENST00000606491 432 ntBASIC2.45□□□□□ -2.02
VPS4BO75351 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC2.45□□□□□ -2.02
VPS4BO75351 U2.15-201ENST00000611544 191 ntBASIC2.45□□□□□ -2.02
VPS4BO75351 U2.16-201ENST00000613119 191 ntBASIC2.45□□□□□ -2.02
VPS4BO75351 U2.12-201ENST00000613778 191 ntBASIC2.45□□□□□ -2.02
VPS4BO75351 U2.20-201ENST00000613956 192 ntBASIC2.45□□□□□ -2.02
VPS4BO75351 U2.9-201ENST00000615427 191 ntBASIC2.45□□□□□ -2.02
VPS4BO75351 U2.11-201ENST00000616345 191 ntBASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 164.4 ms