Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 MIR1302-3-201ENST00000408128 138 ntBASIC1.97□□□□□ -2.09
ZIC3O60481 MIR1302-6-201ENST00000408466 90 ntBASIC1.97□□□□□ -2.09
ZIC3O60481 RN7SKP192-201ENST00000411291 327 ntBASIC1.97□□□□□ -2.09
ZIC3O60481 AC096920.1-201ENST00000423991 241 ntBASIC1.97□□□□□ -2.09
ZIC3O60481 SUMO1P2-201ENST00000452524 304 ntBASIC1.97□□□□□ -2.09
ZIC3O60481 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC1.97□□□□□ -2.09
ZIC3O60481 SNORA31.11-201ENST00000516528 139 ntBASIC1.97□□□□□ -2.09
ZIC3O60481 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.97□□□□□ -2.09
ZIC3O60481 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC1.97□□□□□ -2.09
ZIC3O60481 AL353149.1-201ENST00000610667 244 ntBASIC1.97□□□□□ -2.09
ZIC3O60481 AC245884.12-201ENST00000615364 59 ntBASIC1.97□□□□□ -2.09
ZIC3O60481 AP001282.2-201ENST00000616149 309 ntBASIC1.97□□□□□ -2.09
ZIC3O60481 U4.1-201ENST00000620349 87 ntBASIC1.97□□□□□ -2.09
ZIC3O60481 AC022513.1-201ENST00000624512 117 ntBASIC1.97□□□□□ -2.09
ZIC3O60481 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.96□□□□□ -2.1
ZIC3O60481 Y_RNA.16-201ENST00000362421 102 ntBASIC1.96□□□□□ -2.1
ZIC3O60481 RNU6-1266P-201ENST00000362794 105 ntBASIC1.96□□□□□ -2.1
ZIC3O60481 RNU6-23P-201ENST00000363283 107 ntBASIC1.96□□□□□ -2.1
ZIC3O60481 Y_RNA.383-201ENST00000383855 97 ntBASIC1.96□□□□□ -2.1
ZIC3O60481 Y_RNA.452-201ENST00000384202 108 ntBASIC1.96□□□□□ -2.1
ZIC3O60481 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
ZIC3O60481 SNORA48.3-201ENST00000391081 134 ntBASIC1.96□□□□□ -2.1
ZIC3O60481 AL117342.1-201ENST00000404861 406 ntBASIC1.96□□□□□ -2.1
ZIC3O60481 RNA5SP270-201ENST00000411361 118 ntBASIC1.96□□□□□ -2.1
ZIC3O60481 HMGN2P34-201ENST00000437647 269 ntBASIC1.96□□□□□ -2.1
ZIC3O60481 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
ZIC3O60481 TRBVB-201ENST00000477100 408 ntBASIC1.96□□□□□ -2.1
ZIC3O60481 RPS29P21-201ENST00000496272 170 ntBASIC1.96□□□□□ -2.1
ZIC3O60481 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.96□□□□□ -2.1
ZIC3O60481 SCARNA16.3-201ENST00000516595 184 ntBASIC1.96□□□□□ -2.1
ZIC3O60481 RNU7-193P-201ENST00000516723 65 ntBASIC1.96□□□□□ -2.1
ZIC3O60481 SNORA31.25-201ENST00000517242 134 ntBASIC1.96□□□□□ -2.1
ZIC3O60481 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.96□□□□□ -2.1
ZIC3O60481 MIR6895-201ENST00000613497 78 ntBASIC1.96□□□□□ -2.1
ZIC3O60481 AC006435.5-201ENST00000624486 112 ntBASIC1.96□□□□□ -2.1
ZIC3O60481 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC1.96□□□□□ -2.1
ZIC3O60481 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC1.96□□□□□ -2.1
ZIC3O60481 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.95□□□□□ -2.1
ZIC3O60481 SNORD114-7-201ENST00000362520 77 ntBASIC1.95□□□□□ -2.1
ZIC3O60481 SNORA27.1-201ENST00000362604 124 ntBASIC1.95□□□□□ -2.1
ZIC3O60481 snoU2-30.2-201ENST00000362805 70 ntBASIC1.95□□□□□ -2.1
ZIC3O60481 Y_RNA.136-201ENST00000363444 102 ntBASIC1.95□□□□□ -2.1
ZIC3O60481 Y_RNA.287-201ENST00000364853 94 ntBASIC1.95□□□□□ -2.1
ZIC3O60481 Y_RNA.329-201ENST00000365209 107 ntBASIC1.95□□□□□ -2.1
ZIC3O60481 Y_RNA.418-201ENST00000384029 102 ntBASIC1.95□□□□□ -2.1
ZIC3O60481 SNORA6-201ENST00000384033 151 ntBASIC1.95□□□□□ -2.1
ZIC3O60481 SNORA67.3-201ENST00000384366 140 ntBASIC1.95□□□□□ -2.1
ZIC3O60481 SNORA64-201ENST00000384674 134 ntBASIC1.95□□□□□ -2.1
ZIC3O60481 AL023284.1-201ENST00000403956 276 ntBASIC1.95□□□□□ -2.1
ZIC3O60481 SNORA11.4-201ENST00000408823 129 ntBASIC1.95□□□□□ -2.1
ZIC3O60481 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.95□□□□□ -2.1
ZIC3O60481 AL121890.1-201ENST00000435457 205 ntBASIC1.95□□□□□ -2.1
ZIC3O60481 Y_RNA.668-201ENST00000516233 93 ntBASIC1.95□□□□□ -2.1
ZIC3O60481 RNU6-1041P-201ENST00000516254 102 ntBASIC1.95□□□□□ -2.1
ZIC3O60481 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.95□□□□□ -2.1
ZIC3O60481 AC121758.2-201ENST00000553271 193 ntBASIC1.95□□□□□ -2.1
ZIC3O60481 AC009127.3-201ENST00000570531 403 ntBASIC1.95□□□□□ -2.1
ZIC3O60481 MIR4648-201ENST00000580107 72 ntBASIC1.95□□□□□ -2.1
ZIC3O60481 MIR3149-201ENST00000584629 83 ntBASIC1.95□□□□□ -2.1
ZIC3O60481 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.95□□□□□ -2.1
ZIC3O60481 MIR6132-201ENST00000622083 109 ntBASIC1.95□□□□□ -2.1
ZIC3O60481 MIR338-201ENST00000636369 67 ntBASIC1.95□□□□□ -2.1
ZIC3O60481 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
ZIC3O60481 AC010615.1-201ENST00000594254 1764 ntBASIC1.95□□□□□ -2.1
ZIC3O60481 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC1.94□□□□□ -2.1
ZIC3O60481 Y_RNA.124-201ENST00000363339 93 ntBASIC1.94□□□□□ -2.1
ZIC3O60481 Y_RNA.193-201ENST00000363979 102 ntBASIC1.94□□□□□ -2.1
ZIC3O60481 Y_RNA.569-201ENST00000384749 103 ntBASIC1.94□□□□□ -2.1
ZIC3O60481 MIR873-201ENST00000401120 77 ntBASIC1.94□□□□□ -2.1
ZIC3O60481 POLR2KP2-201ENST00000438155 177 ntBASIC1.94□□□□□ -2.1
ZIC3O60481 ATP5J2P3-201ENST00000451550 258 ntBASIC1.94□□□□□ -2.1
ZIC3O60481 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC1.94□□□□□ -2.1
ZIC3O60481 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.94□□□□□ -2.1
ZIC3O60481 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
ZIC3O60481 IGLV3-17-201ENST00000519099 244 ntBASIC1.94□□□□□ -2.1
ZIC3O60481 MIR5694-201ENST00000581190 76 ntBASIC1.94□□□□□ -2.1
ZIC3O60481 DEFB117-201ENST00000602356 141 ntBASIC1.94□□□□□ -2.1
ZIC3O60481 MIR6715A-201ENST00000615929 79 ntBASIC1.94□□□□□ -2.1
ZIC3O60481 MIR219B-201ENST00000637023 88 ntBASIC1.94□□□□□ -2.1
ZIC3O60481 U6.104-201ENST00000637979 90 ntBASIC1.94□□□□□ -2.1
ZIC3O60481 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC1.94□□□□□ -2.1
ZIC3O60481 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
ZIC3O60481 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
ZIC3O60481 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.93□□□□□ -2.1
ZIC3O60481 RNU6-326P-201ENST00000365480 107 ntBASIC1.93□□□□□ -2.1
ZIC3O60481 SNORA80E-201ENST00000384744 137 ntBASIC1.93□□□□□ -2.1
ZIC3O60481 MIR597-201ENST00000384968 97 ntBASIC1.93□□□□□ -2.1
ZIC3O60481 RNA5SP465-201ENST00000391195 109 ntBASIC1.93□□□□□ -2.1
ZIC3O60481 MIR1261-201ENST00000408659 82 ntBASIC1.93□□□□□ -2.1
ZIC3O60481 RNU2-61P-201ENST00000411069 191 ntBASIC1.93□□□□□ -2.1
ZIC3O60481 MRPS10P1-201ENST00000448483 130 ntBASIC1.93□□□□□ -2.1
ZIC3O60481 RPL23AP7-203ENST00000449021 469 ntBASIC1.93□□□□□ -2.1
ZIC3O60481 AC104435.1-201ENST00000483483 166 ntBASIC1.93□□□□□ -2.1
ZIC3O60481 RNU6-1146P-201ENST00000516282 102 ntBASIC1.93□□□□□ -2.1
ZIC3O60481 RNU6-1338P-201ENST00000516328 91 ntBASIC1.93□□□□□ -2.1
ZIC3O60481 AC027419.1-201ENST00000522976 328 ntBASIC1.93□□□□□ -2.1
ZIC3O60481 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.93□□□□□ -2.1
ZIC3O60481 DEFB108E-201ENST00000524692 240 ntBASIC1.93□□□□□ -2.1
ZIC3O60481 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.93□□□□□ -2.1
ZIC3O60481 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 147.2 ms