Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 PRR13P7-201ENST00000605538 430 ntBASIC1.34□□□□□ -2.19
LCMT2O60294 AC084781.2-201ENST00000615568 161 ntBASIC1.34□□□□□ -2.19
LCMT2O60294 U6.73-201ENST00000619194 103 ntBASIC1.34□□□□□ -2.19
LCMT2O60294 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.2
LCMT2O60294 ZNF209P-201ENST00000593450 2304 ntBASIC1.33□□□□□ -2.2
LCMT2O60294 SNORA72.2-201ENST00000365028 127 ntBASIC1.33□□□□□ -2.2
LCMT2O60294 Y_RNA.356-201ENST00000365475 113 ntBASIC1.33□□□□□ -2.2
LCMT2O60294 RNU6-1264P-201ENST00000383891 107 ntBASIC1.33□□□□□ -2.2
LCMT2O60294 Y_RNA.384-201ENST00000383909 102 ntBASIC1.33□□□□□ -2.2
LCMT2O60294 Y_RNA.498-201ENST00000384460 102 ntBASIC1.33□□□□□ -2.2
LCMT2O60294 MIR515-2-201ENST00000384883 83 ntBASIC1.33□□□□□ -2.2
LCMT2O60294 MIR515-1-201ENST00000384884 83 ntBASIC1.33□□□□□ -2.2
LCMT2O60294 SNORA69.1-201ENST00000390904 137 ntBASIC1.33□□□□□ -2.2
LCMT2O60294 RPL21P1-201ENST00000399532 476 ntBASIC1.33□□□□□ -2.2
LCMT2O60294 SNORD12B-201ENST00000410433 91 ntBASIC1.33□□□□□ -2.2
LCMT2O60294 BTF3P4-201ENST00000418852 495 ntBASIC1.33□□□□□ -2.2
LCMT2O60294 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC1.33□□□□□ -2.2
LCMT2O60294 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.33□□□□□ -2.2
LCMT2O60294 MTND5P20-201ENST00000448677 143 ntBASIC1.33□□□□□ -2.2
LCMT2O60294 RNU7-95P-201ENST00000459222 64 ntBASIC1.33□□□□□ -2.2
LCMT2O60294 RNU7-169P-201ENST00000459456 61 ntBASIC1.33□□□□□ -2.2
LCMT2O60294 RPS26P45-201ENST00000471748 340 ntBASIC1.33□□□□□ -2.2
LCMT2O60294 CYCSP23-201ENST00000519781 313 ntBASIC1.33□□□□□ -2.2
LCMT2O60294 AC024995.1-201ENST00000523014 93 ntBASIC1.33□□□□□ -2.2
LCMT2O60294 AC023157.2-201ENST00000540596 141 ntBASIC1.33□□□□□ -2.2
LCMT2O60294 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.33□□□□□ -2.2
LCMT2O60294 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.33□□□□□ -2.2
LCMT2O60294 AC022432.1-201ENST00000595739 310 ntBASIC1.33□□□□□ -2.2
LCMT2O60294 AC022217.4-201ENST00000604389 163 ntBASIC1.33□□□□□ -2.2
LCMT2O60294 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC1.33□□□□□ -2.2
LCMT2O60294 AL359075.3-201ENST00000613288 217 ntBASIC1.33□□□□□ -2.2
LCMT2O60294 MIR7974-201ENST00000615835 79 ntBASIC1.33□□□□□ -2.2
LCMT2O60294 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.33□□□□□ -2.2
LCMT2O60294 AL121890.5-201ENST00000620848 304 ntBASIC1.33□□□□□ -2.2
LCMT2O60294 AC112487.2-201ENST00000637950 304 ntBASIC1.33□□□□□ -2.2
LCMT2O60294 AC073544.1-201ENST00000600110 1595 ntBASIC1.33□□□□□ -2.2
LCMT2O60294 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.33□□□□□ -2.2
LCMT2O60294 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.32□□□□□ -2.2
LCMT2O60294 RNU6-1266P-201ENST00000362794 105 ntBASIC1.32□□□□□ -2.2
LCMT2O60294 Y_RNA.58-201ENST00000362807 102 ntBASIC1.32□□□□□ -2.2
LCMT2O60294 Y_RNA.154-201ENST00000363624 102 ntBASIC1.32□□□□□ -2.2
LCMT2O60294 RNU6-454P-201ENST00000364292 107 ntBASIC1.32□□□□□ -2.2
LCMT2O60294 Y_RNA.263-201ENST00000364659 114 ntBASIC1.32□□□□□ -2.2
LCMT2O60294 RNY3P1-201ENST00000365085 102 ntBASIC1.32□□□□□ -2.2
LCMT2O60294 RNY3-201ENST00000365484 102 ntBASIC1.32□□□□□ -2.2
LCMT2O60294 SNORA20B-201ENST00000384220 132 ntBASIC1.32□□□□□ -2.2
LCMT2O60294 MIR625-201ENST00000385047 85 ntBASIC1.32□□□□□ -2.2
LCMT2O60294 RNU6-1009P-201ENST00000390996 107 ntBASIC1.32□□□□□ -2.2
LCMT2O60294 RPL30P13-201ENST00000418873 348 ntBASIC1.32□□□□□ -2.2
LCMT2O60294 MTND4P28-201ENST00000426217 387 ntBASIC1.32□□□□□ -2.2
LCMT2O60294 AC069257.2-201ENST00000441819 155 ntBASIC1.32□□□□□ -2.2
LCMT2O60294 AC093019.1-201ENST00000443135 252 ntBASIC1.32□□□□□ -2.2
LCMT2O60294 RPS29P23-201ENST00000458635 123 ntBASIC1.32□□□□□ -2.2
LCMT2O60294 snoU13.27-201ENST00000459278 104 ntBASIC1.32□□□□□ -2.2
LCMT2O60294 AC099513.1-201ENST00000490423 301 ntBASIC1.32□□□□□ -2.2
LCMT2O60294 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.32□□□□□ -2.2
LCMT2O60294 AC079140.2-201ENST00000506193 142 ntBASIC1.32□□□□□ -2.2
LCMT2O60294 AC074133.1-201ENST00000515696 183 ntBASIC1.32□□□□□ -2.2
LCMT2O60294 SNORA31.10-201ENST00000516482 106 ntBASIC1.32□□□□□ -2.2
LCMT2O60294 RNU1-142P-201ENST00000516682 145 ntBASIC1.32□□□□□ -2.2
LCMT2O60294 Y_RNA.702-201ENST00000516843 96 ntBASIC1.32□□□□□ -2.2
LCMT2O60294 RNU6-699P-201ENST00000517081 110 ntBASIC1.32□□□□□ -2.2
LCMT2O60294 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.32□□□□□ -2.2
LCMT2O60294 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.32□□□□□ -2.2
LCMT2O60294 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC1.32□□□□□ -2.2
LCMT2O60294 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.32□□□□□ -2.2
LCMT2O60294 AL161670.1-201ENST00000554348 137 ntBASIC1.32□□□□□ -2.2
LCMT2O60294 AL137100.2-201ENST00000555786 315 ntBASIC1.32□□□□□ -2.2
LCMT2O60294 AC138305.3-201ENST00000624988 240 ntBASIC1.32□□□□□ -2.2
LCMT2O60294 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.32□□□□□ -2.2
LCMT2O60294 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.32□□□□□ -2.2
LCMT2O60294 MIR26B-201ENST00000362251 77 ntBASIC1.31□□□□□ -2.2
LCMT2O60294 MIR302D-201ENST00000362275 68 ntBASIC1.31□□□□□ -2.2
LCMT2O60294 Y_RNA.70-201ENST00000362886 110 ntBASIC1.31□□□□□ -2.2
LCMT2O60294 Y_RNA.164-201ENST00000363709 102 ntBASIC1.31□□□□□ -2.2
LCMT2O60294 AL161935.2-201ENST00000414627 60 ntBASIC1.31□□□□□ -2.2
LCMT2O60294 AP1B1P2-201ENST00000416196 106 ntBASIC1.31□□□□□ -2.2
LCMT2O60294 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.31□□□□□ -2.2
LCMT2O60294 AC010154.1-201ENST00000425857 269 ntBASIC1.31□□□□□ -2.2
LCMT2O60294 RAB28P5-201ENST00000427490 651 ntBASIC1.31□□□□□ -2.2
LCMT2O60294 AC096644.2-201ENST00000429278 159 ntBASIC1.31□□□□□ -2.2
LCMT2O60294 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.31□□□□□ -2.2
LCMT2O60294 CHEK2P4-201ENST00000450340 246 ntBASIC1.31□□□□□ -2.2
LCMT2O60294 RNU6-625P-201ENST00000459412 107 ntBASIC1.31□□□□□ -2.2
LCMT2O60294 AC010469.2-201ENST00000496412 480 ntBASIC1.31□□□□□ -2.2
LCMT2O60294 AC010598.1-201ENST00000510378 103 ntBASIC1.31□□□□□ -2.2
LCMT2O60294 AC019176.1-201ENST00000518519 225 ntBASIC1.31□□□□□ -2.2
LCMT2O60294 AL160236.1-201ENST00000556317 195 ntBASIC1.31□□□□□ -2.2
LCMT2O60294 AC055872.1-201ENST00000570978 278 ntBASIC1.31□□□□□ -2.2
LCMT2O60294 MIR4438-201ENST00000585271 93 ntBASIC1.31□□□□□ -2.2
LCMT2O60294 AL512598.1-201ENST00000610158 273 ntBASIC1.31□□□□□ -2.2
LCMT2O60294 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.3□□□□□ -2.2
LCMT2O60294 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
LCMT2O60294 MIR410-201ENST00000362222 80 ntBASIC1.3□□□□□ -2.2
LCMT2O60294 RNU6-490P-201ENST00000362985 107 ntBASIC1.3□□□□□ -2.2
LCMT2O60294 RNU6-961P-201ENST00000363893 105 ntBASIC1.3□□□□□ -2.2
LCMT2O60294 Y_RNA.314-201ENST00000365114 102 ntBASIC1.3□□□□□ -2.2
LCMT2O60294 RNU6-1040P-201ENST00000383974 107 ntBASIC1.3□□□□□ -2.2
LCMT2O60294 RNU6-926P-201ENST00000384075 107 ntBASIC1.3□□□□□ -2.2
LCMT2O60294 RNU6-708P-201ENST00000384217 107 ntBASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 116.5 ms