Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 MTND4LP26-201ENST00000518144 282 ntBASIC0.37□□□□□ -2.35
KDELR3O43731 AC091178.2-201ENST00000584401 117 ntBASIC0.37□□□□□ -2.35
KDELR3O43731 AC073648.5-201ENST00000603502 305 ntBASIC0.37□□□□□ -2.35
KDELR3O43731 AC093913.1-201ENST00000614178 329 ntBASIC0.37□□□□□ -2.35
KDELR3O43731 Z69908.1-201ENST00000622603 247 ntBASIC0.37□□□□□ -2.35
KDELR3O43731 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.37□□□□□ -2.35
KDELR3O43731 MIRLET7C-201ENST00000362160 84 ntBASIC0.36□□□□□ -2.35
KDELR3O43731 SNORA50A-201ENST00000384225 134 ntBASIC0.36□□□□□ -2.35
KDELR3O43731 MIR452-201ENST00000385020 85 ntBASIC0.36□□□□□ -2.35
KDELR3O43731 RNU6-159P-201ENST00000391080 106 ntBASIC0.36□□□□□ -2.35
KDELR3O43731 RNU6-994P-201ENST00000410507 111 ntBASIC0.36□□□□□ -2.35
KDELR3O43731 AL162725.1-201ENST00000435405 301 ntBASIC0.36□□□□□ -2.35
KDELR3O43731 Z82188.1-201ENST00000436709 154 ntBASIC0.36□□□□□ -2.35
KDELR3O43731 snoU13.25-201ENST00000458945 104 ntBASIC0.36□□□□□ -2.35
KDELR3O43731 RN7SKP12-201ENST00000516275 143 ntBASIC0.36□□□□□ -2.35
KDELR3O43731 AL358944.1-201ENST00000528537 144 ntBASIC0.36□□□□□ -2.35
KDELR3O43731 AC104383.1-201ENST00000530297 370 ntBASIC0.36□□□□□ -2.35
KDELR3O43731 MIR3192-201ENST00000584920 77 ntBASIC0.36□□□□□ -2.35
KDELR3O43731 AC007684.1-201ENST00000609671 477 ntBASIC0.36□□□□□ -2.35
KDELR3O43731 AL158209.2-201ENST00000619266 216 ntBASIC0.36□□□□□ -2.35
KDELR3O43731 MIR6516-201ENST00000630554 81 ntBASIC0.36□□□□□ -2.35
KDELR3O43731 Y_RNA.1-201ENST00000352915 104 ntBASIC0.35□□□□□ -2.35
KDELR3O43731 SNORD113-7-201ENST00000363762 77 ntBASIC0.35□□□□□ -2.35
KDELR3O43731 Y_RNA.296-201ENST00000364930 108 ntBASIC0.35□□□□□ -2.35
KDELR3O43731 VTRNA1-3-201ENST00000365645 89 ntBASIC0.35□□□□□ -2.35
KDELR3O43731 RNU6-1105P-201ENST00000384774 107 ntBASIC0.35□□□□□ -2.35
KDELR3O43731 MIR526A1-201ENST00000384897 85 ntBASIC0.35□□□□□ -2.35
KDELR3O43731 MIR520G-201ENST00000385064 90 ntBASIC0.35□□□□□ -2.35
KDELR3O43731 MTCYBP10-201ENST00000424905 650 ntBASIC0.35□□□□□ -2.35
KDELR3O43731 MTCO1P20-201ENST00000425366 358 ntBASIC0.35□□□□□ -2.35
KDELR3O43731 DAP3P1-201ENST00000441522 278 ntBASIC0.35□□□□□ -2.35
KDELR3O43731 RNU6-261P-201ENST00000459506 102 ntBASIC0.35□□□□□ -2.35
KDELR3O43731 MTCO2P30-201ENST00000503662 364 ntBASIC0.35□□□□□ -2.35
KDELR3O43731 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.35□□□□□ -2.35
KDELR3O43731 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.35□□□□□ -2.35
KDELR3O43731 POLR3GP2-201ENST00000588366 668 ntBASIC0.35□□□□□ -2.35
KDELR3O43731 RNU6-407P-201ENST00000365280 104 ntBASIC0.34□□□□□ -2.36
KDELR3O43731 MTCYBP4-201ENST00000401524 249 ntBASIC0.34□□□□□ -2.36
KDELR3O43731 RPL30P16-201ENST00000419341 429 ntBASIC0.34□□□□□ -2.36
KDELR3O43731 ZNF885P-201ENST00000420174 1098 ntBASIC0.34□□□□□ -2.36
KDELR3O43731 AL031667.1-201ENST00000440222 725 ntBASIC0.34□□□□□ -2.36
KDELR3O43731 PCMTD1P1-201ENST00000455560 355 ntBASIC0.34□□□□□ -2.36
KDELR3O43731 RPS3AP17-201ENST00000472594 777 ntBASIC0.34□□□□□ -2.36
KDELR3O43731 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC0.34□□□□□ -2.36
KDELR3O43731 RNU6-1291P-201ENST00000516591 104 ntBASIC0.34□□□□□ -2.36
KDELR3O43731 AC091144.1-201ENST00000519573 138 ntBASIC0.34□□□□□ -2.36
KDELR3O43731 AC134698.4-201ENST00000523451 826 ntBASIC0.34□□□□□ -2.36
KDELR3O43731 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC0.34□□□□□ -2.36
KDELR3O43731 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.34□□□□□ -2.36
KDELR3O43731 AC011195.1-201ENST00000578177 177 ntBASIC0.34□□□□□ -2.36
KDELR3O43731 AC120024.3-201ENST00000603167 156 ntBASIC0.34□□□□□ -2.36
KDELR3O43731 AC010999.1-201ENST00000611856 324 ntBASIC0.34□□□□□ -2.36
KDELR3O43731 AC009248.2-201ENST00000619826 254 ntBASIC0.34□□□□□ -2.36
KDELR3O43731 AC027279.3-201ENST00000625055 122 ntBASIC0.34□□□□□ -2.36
KDELR3O43731 Y_RNA.381-201ENST00000365666 102 ntBASIC0.33□□□□□ -2.36
KDELR3O43731 SNORA36.2-201ENST00000384004 127 ntBASIC0.33□□□□□ -2.36
KDELR3O43731 RNA5SP222-201ENST00000411039 105 ntBASIC0.33□□□□□ -2.36
KDELR3O43731 RN7SKP142-201ENST00000411236 328 ntBASIC0.33□□□□□ -2.36
KDELR3O43731 AL353193.1-201ENST00000421444 268 ntBASIC0.33□□□□□ -2.36
KDELR3O43731 AC018865.2-201ENST00000423631 129 ntBASIC0.33□□□□□ -2.36
KDELR3O43731 AC244023.1-201ENST00000426884 112 ntBASIC0.33□□□□□ -2.36
KDELR3O43731 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC0.33□□□□□ -2.36
KDELR3O43731 AC107401.1-201ENST00000503426 685 ntBASIC0.33□□□□□ -2.36
KDELR3O43731 ACA59.1-201ENST00000515966 143 ntBASIC0.33□□□□□ -2.36
KDELR3O43731 MIR4528-201ENST00000577763 90 ntBASIC0.33□□□□□ -2.36
KDELR3O43731 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.33□□□□□ -2.36
KDELR3O43731 AC242498.1-201ENST00000604134 111 ntBASIC0.33□□□□□ -2.36
KDELR3O43731 AC243994.1-201ENST00000618627 109 ntBASIC0.33□□□□□ -2.36
KDELR3O43731 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.32□□□□□ -2.36
KDELR3O43731 RNA5SP48-201ENST00000363969 126 ntBASIC0.32□□□□□ -2.36
KDELR3O43731 SNORA20B-201ENST00000384220 132 ntBASIC0.32□□□□□ -2.36
KDELR3O43731 RNU6-342P-201ENST00000384521 104 ntBASIC0.32□□□□□ -2.36
KDELR3O43731 AC244098.3-201ENST00000424803 96 ntBASIC0.32□□□□□ -2.36
KDELR3O43731 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.32□□□□□ -2.36
KDELR3O43731 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.32□□□□□ -2.36
KDELR3O43731 RNU7-187P-201ENST00000458985 68 ntBASIC0.32□□□□□ -2.36
KDELR3O43731 AC018710.1-201ENST00000506509 158 ntBASIC0.32□□□□□ -2.36
KDELR3O43731 RNA5SP20-201ENST00000515976 84 ntBASIC0.32□□□□□ -2.36
KDELR3O43731 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.32□□□□□ -2.36
KDELR3O43731 UBL5P4-201ENST00000562584 236 ntBASIC0.32□□□□□ -2.36
KDELR3O43731 FAM157A-202ENST00000615155 405 ntBASIC0.32□□□□□ -2.36
KDELR3O43731 AC121333.1-201ENST00000567488 2709 ntBASIC0.32□□□□□ -2.36
KDELR3O43731 AC073544.1-201ENST00000600110 1595 ntBASIC0.32□□□□□ -2.36
KDELR3O43731 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.32□□□□□ -2.36
KDELR3O43731 SNORD114-23-201ENST00000363536 72 ntBASIC0.31□□□□□ -2.36
KDELR3O43731 RNU4-20P-201ENST00000365601 151 ntBASIC0.31□□□□□ -2.36
KDELR3O43731 RNU6-348P-201ENST00000384386 107 ntBASIC0.31□□□□□ -2.36
KDELR3O43731 MIR15B-201ENST00000385045 98 ntBASIC0.31□□□□□ -2.36
KDELR3O43731 MIR216A-201ENST00000385063 110 ntBASIC0.31□□□□□ -2.36
KDELR3O43731 SNORD111-201ENST00000408139 94 ntBASIC0.31□□□□□ -2.36
KDELR3O43731 AL445567.1-201ENST00000439121 144 ntBASIC0.31□□□□□ -2.36
KDELR3O43731 RPS20P10-201ENST00000451209 253 ntBASIC0.31□□□□□ -2.36
KDELR3O43731 Y_RNA.683-201ENST00000516508 93 ntBASIC0.31□□□□□ -2.36
KDELR3O43731 MTND1P24-201ENST00000552175 861 ntBASIC0.31□□□□□ -2.36
KDELR3O43731 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.31□□□□□ -2.36
KDELR3O43731 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.31□□□□□ -2.36
KDELR3O43731 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.3□□□□□ -2.36
KDELR3O43731 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.3□□□□□ -2.36
KDELR3O43731 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.3□□□□□ -2.36
KDELR3O43731 HMGN2P26-201ENST00000463169 339 ntBASIC0.3□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 200.3 ms