Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 AL513328.1-201ENST00000446460 224 ntBASIC2.36□□□□□ -2.03
PHGDHO43175 RNU2-31P-201ENST00000516954 155 ntBASIC2.36□□□□□ -2.03
PHGDHO43175 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.36□□□□□ -2.03
PHGDHO43175 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.36□□□□□ -2.03
PHGDHO43175 MIR3128-201ENST00000581957 66 ntBASIC2.36□□□□□ -2.03
PHGDHO43175 MIR4438-201ENST00000585271 93 ntBASIC2.36□□□□□ -2.03
PHGDHO43175 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.36□□□□□ -2.03
PHGDHO43175 CENPCP1-201ENST00000533085 2578 ntBASIC2.36□□□□□ -2.03
PHGDHO43175 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
PHGDHO43175 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.35□□□□□ -2.03
PHGDHO43175 SNORD114-7-201ENST00000362520 77 ntBASIC2.35□□□□□ -2.03
PHGDHO43175 Y_RNA.188-201ENST00000363952 111 ntBASIC2.35□□□□□ -2.03
PHGDHO43175 RNU6-326P-201ENST00000365480 107 ntBASIC2.35□□□□□ -2.03
PHGDHO43175 RNU6-514P-201ENST00000384208 107 ntBASIC2.35□□□□□ -2.03
PHGDHO43175 Y_RNA.510-201ENST00000384511 114 ntBASIC2.35□□□□□ -2.03
PHGDHO43175 AL359511.1-201ENST00000402970 211 ntBASIC2.35□□□□□ -2.03
PHGDHO43175 AL117342.1-201ENST00000404861 406 ntBASIC2.35□□□□□ -2.03
PHGDHO43175 SNORA11.4-201ENST00000408823 129 ntBASIC2.35□□□□□ -2.03
PHGDHO43175 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.35□□□□□ -2.03
PHGDHO43175 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.35□□□□□ -2.03
PHGDHO43175 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.35□□□□□ -2.03
PHGDHO43175 AC010409.1-201ENST00000487382 476 ntBASIC2.35□□□□□ -2.03
PHGDHO43175 AC026436.1-201ENST00000510537 270 ntBASIC2.35□□□□□ -2.03
PHGDHO43175 Y_RNA.673-201ENST00000516306 88 ntBASIC2.35□□□□□ -2.03
PHGDHO43175 RNA5SP148-201ENST00000516527 94 ntBASIC2.35□□□□□ -2.03
PHGDHO43175 RNU6-1271P-201ENST00000517049 105 ntBASIC2.35□□□□□ -2.03
PHGDHO43175 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC2.35□□□□□ -2.03
PHGDHO43175 RPL21P9-201ENST00000556149 474 ntBASIC2.35□□□□□ -2.03
PHGDHO43175 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.35□□□□□ -2.03
PHGDHO43175 AC009127.3-201ENST00000570531 403 ntBASIC2.35□□□□□ -2.03
PHGDHO43175 MIR6817-201ENST00000615588 66 ntBASIC2.35□□□□□ -2.03
PHGDHO43175 AC022513.1-201ENST00000624512 117 ntBASIC2.35□□□□□ -2.03
PHGDHO43175 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.35□□□□□ -2.03
PHGDHO43175 AC005336.3-201ENST00000623833 2679 ntBASIC2.35□□□□□ -2.03
PHGDHO43175 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.34□□□□□ -2.03
PHGDHO43175 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.34□□□□□ -2.03
PHGDHO43175 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC2.34□□□□□ -2.03
PHGDHO43175 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
PHGDHO43175 SNORA25.1-201ENST00000362326 128 ntBASIC2.34□□□□□ -2.03
PHGDHO43175 RNU4-80P-201ENST00000363200 141 ntBASIC2.34□□□□□ -2.03
PHGDHO43175 RNU1-96P-201ENST00000364163 162 ntBASIC2.34□□□□□ -2.03
PHGDHO43175 Y_RNA.350-201ENST00000365409 98 ntBASIC2.34□□□□□ -2.03
PHGDHO43175 Y_RNA.562-201ENST00000384695 113 ntBASIC2.34□□□□□ -2.03
PHGDHO43175 MIR144-201ENST00000384886 86 ntBASIC2.34□□□□□ -2.03
PHGDHO43175 RNA5SP467-201ENST00000391274 118 ntBASIC2.34□□□□□ -2.03
PHGDHO43175 SNORD23.1-201ENST00000408212 104 ntBASIC2.34□□□□□ -2.03
PHGDHO43175 RNU6-710P-201ENST00000410424 105 ntBASIC2.34□□□□□ -2.03
PHGDHO43175 RNU6-1186P-201ENST00000410429 97 ntBASIC2.34□□□□□ -2.03
PHGDHO43175 RNU2-61P-201ENST00000411069 191 ntBASIC2.34□□□□□ -2.03
PHGDHO43175 MTND4LP30-201ENST00000454092 297 ntBASIC2.34□□□□□ -2.03
PHGDHO43175 RPS26P55-201ENST00000471178 356 ntBASIC2.34□□□□□ -2.03
PHGDHO43175 SERF1AP1-201ENST00000514575 187 ntBASIC2.34□□□□□ -2.03
PHGDHO43175 MIR3671-201ENST00000580455 88 ntBASIC2.34□□□□□ -2.03
PHGDHO43175 MIR3162-201ENST00000581818 82 ntBASIC2.34□□□□□ -2.03
PHGDHO43175 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC2.34□□□□□ -2.03
PHGDHO43175 U6.73-201ENST00000619194 103 ntBASIC2.34□□□□□ -2.03
PHGDHO43175 MIR1291-201ENST00000627649 87 ntBASIC2.34□□□□□ -2.03
PHGDHO43175 Y_RNA.136-201ENST00000363444 102 ntBASIC2.33□□□□□ -2.04
PHGDHO43175 RNA5SP68-201ENST00000363885 119 ntBASIC2.33□□□□□ -2.04
PHGDHO43175 SNORD114-30-201ENST00000364448 72 ntBASIC2.33□□□□□ -2.04
PHGDHO43175 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
PHGDHO43175 RNA5SP323-201ENST00000391094 133 ntBASIC2.33□□□□□ -2.04
PHGDHO43175 RNA5SP450-201ENST00000411206 102 ntBASIC2.33□□□□□ -2.04
PHGDHO43175 CST2P1-201ENST00000425770 87 ntBASIC2.33□□□□□ -2.04
PHGDHO43175 AC010154.1-201ENST00000425857 269 ntBASIC2.33□□□□□ -2.04
PHGDHO43175 MTCO1P5-201ENST00000433573 344 ntBASIC2.33□□□□□ -2.04
PHGDHO43175 AC099677.2-201ENST00000436385 175 ntBASIC2.33□□□□□ -2.04
PHGDHO43175 AC007229.1-201ENST00000590455 412 ntBASIC2.33□□□□□ -2.04
PHGDHO43175 AC006023.1-201ENST00000603944 259 ntBASIC2.33□□□□□ -2.04
PHGDHO43175 AC012640.5-201ENST00000623897 319 ntBASIC2.33□□□□□ -2.04
PHGDHO43175 AC007336.1-201ENST00000576365 3828 ntBASIC2.33□□□□□ -2.04
PHGDHO43175 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.32□□□□□ -2.04
PHGDHO43175 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
PHGDHO43175 MIR335-201ENST00000362173 94 ntBASIC2.32□□□□□ -2.04
PHGDHO43175 Y_RNA.60-201ENST00000362831 98 ntBASIC2.32□□□□□ -2.04
PHGDHO43175 SNORA33-201ENST00000363664 130 ntBASIC2.32□□□□□ -2.04
PHGDHO43175 MIR515-2-201ENST00000384883 83 ntBASIC2.32□□□□□ -2.04
PHGDHO43175 MIR515-1-201ENST00000384884 83 ntBASIC2.32□□□□□ -2.04
PHGDHO43175 AL603910.2-201ENST00000407268 136 ntBASIC2.32□□□□□ -2.04
PHGDHO43175 RNU6-855P-201ENST00000410395 104 ntBASIC2.32□□□□□ -2.04
PHGDHO43175 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.32□□□□□ -2.04
PHGDHO43175 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.32□□□□□ -2.04
PHGDHO43175 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.32□□□□□ -2.04
PHGDHO43175 RPL39P38-201ENST00000467018 153 ntBASIC2.32□□□□□ -2.04
PHGDHO43175 AC097462.1-201ENST00000514125 324 ntBASIC2.32□□□□□ -2.04
PHGDHO43175 RNU2-19P-201ENST00000517288 84 ntBASIC2.32□□□□□ -2.04
PHGDHO43175 AC021269.2-201ENST00000532318 330 ntBASIC2.32□□□□□ -2.04
PHGDHO43175 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.32□□□□□ -2.04
PHGDHO43175 AC046143.2-201ENST00000609789 160 ntBASIC2.32□□□□□ -2.04
PHGDHO43175 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
PHGDHO43175 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.31□□□□□ -2.04
PHGDHO43175 RNU6-379P-201ENST00000363813 104 ntBASIC2.31□□□□□ -2.04
PHGDHO43175 Y_RNA.277-201ENST00000364754 102 ntBASIC2.31□□□□□ -2.04
PHGDHO43175 RNU6-1248P-201ENST00000391096 64 ntBASIC2.31□□□□□ -2.04
PHGDHO43175 Y_RNA.618-201ENST00000410949 107 ntBASIC2.31□□□□□ -2.04
PHGDHO43175 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
PHGDHO43175 RPS15AP28-201ENST00000435088 386 ntBASIC2.31□□□□□ -2.04
PHGDHO43175 RNU6-1337P-201ENST00000516525 95 ntBASIC2.31□□□□□ -2.04
PHGDHO43175 RNU7-172P-201ENST00000517125 64 ntBASIC2.31□□□□□ -2.04
PHGDHO43175 MIR4643-201ENST00000577473 78 ntBASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 125.9 ms