Protein–RNA interactions for Protein: O15516

CLOCK, Circadian locomoter output cycles protein kaput, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCKO15516 AC090142.3-201ENST00000519012 385 ntBASIC0.74□□□□□ -2.29
CLOCKO15516 AC092954.2-201ENST00000609103 430 ntBASIC0.74□□□□□ -2.29
CLOCKO15516 Z99129.1-201ENST00000612510 255 ntBASIC0.74□□□□□ -2.29
CLOCKO15516 AC008163.1-202ENST00000636004 2889 ntBASIC0.74□□□□□ -2.29
CLOCKO15516 Y_RNA.135-201ENST00000363439 95 ntBASIC0.73□□□□□ -2.29
CLOCKO15516 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.73□□□□□ -2.29
CLOCKO15516 AC006461.1-201ENST00000412637 326 ntBASIC0.73□□□□□ -2.29
CLOCKO15516 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC0.73□□□□□ -2.29
CLOCKO15516 AC243428.1-201ENST00000421099 264 ntBASIC0.73□□□□□ -2.29
CLOCKO15516 AC093850.1-201ENST00000454121 251 ntBASIC0.73□□□□□ -2.29
CLOCKO15516 RNU7-66P-201ENST00000459469 62 ntBASIC0.73□□□□□ -2.29
CLOCKO15516 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC0.73□□□□□ -2.29
CLOCKO15516 AC019235.1-201ENST00000503847 207 ntBASIC0.73□□□□□ -2.29
CLOCKO15516 PSMC1P5-201ENST00000512850 177 ntBASIC0.73□□□□□ -2.29
CLOCKO15516 RNU7-12P-201ENST00000516030 62 ntBASIC0.73□□□□□ -2.29
CLOCKO15516 RNU6-341P-201ENST00000516973 96 ntBASIC0.73□□□□□ -2.29
CLOCKO15516 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC0.73□□□□□ -2.29
CLOCKO15516 MIR3672-201ENST00000584290 82 ntBASIC0.73□□□□□ -2.29
CLOCKO15516 SNORD116-9-201ENST00000384000 95 ntBASIC0.72□□□□□ -2.29
CLOCKO15516 RNU6-483P-201ENST00000384088 108 ntBASIC0.72□□□□□ -2.29
CLOCKO15516 SNORD116-3-201ENST00000384287 95 ntBASIC0.72□□□□□ -2.29
CLOCKO15516 SNORD116-7-201ENST00000384404 95 ntBASIC0.72□□□□□ -2.29
CLOCKO15516 SNORD116-5-201ENST00000384462 95 ntBASIC0.72□□□□□ -2.29
CLOCKO15516 MIR613-201ENST00000385248 95 ntBASIC0.72□□□□□ -2.29
CLOCKO15516 RNU6-908P-201ENST00000410160 94 ntBASIC0.72□□□□□ -2.29
CLOCKO15516 MTATP6P13-201ENST00000438531 667 ntBASIC0.72□□□□□ -2.29
CLOCKO15516 MTCO2P7-201ENST00000446518 666 ntBASIC0.72□□□□□ -2.29
CLOCKO15516 AC091021.1-201ENST00000468051 388 ntBASIC0.72□□□□□ -2.29
CLOCKO15516 Y_RNA.683-201ENST00000516508 93 ntBASIC0.72□□□□□ -2.29
CLOCKO15516 AC136628.3-201ENST00000521868 290 ntBASIC0.72□□□□□ -2.29
CLOCKO15516 AP002001.1-203ENST00000534002 267 ntBASIC0.72□□□□□ -2.29
CLOCKO15516 MIR5000-201ENST00000577717 103 ntBASIC0.72□□□□□ -2.29
CLOCKO15516 MIR3684-201ENST00000579779 74 ntBASIC0.72□□□□□ -2.29
CLOCKO15516 AC091178.2-201ENST00000584401 117 ntBASIC0.72□□□□□ -2.29
CLOCKO15516 NBR2-204ENST00000587322 63 ntBASIC0.72□□□□□ -2.29
CLOCKO15516 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.72□□□□□ -2.29
CLOCKO15516 PRELID3BP2-201ENST00000605362 201 ntBASIC0.72□□□□□ -2.29
CLOCKO15516 AC245008.1-201ENST00000608123 476 ntBASIC0.72□□□□□ -2.29
CLOCKO15516 AC108706.1-201ENST00000611053 297 ntBASIC0.72□□□□□ -2.29
CLOCKO15516 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
CLOCKO15516 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.71□□□□□ -2.3
CLOCKO15516 AC068700.1-201ENST00000565862 3754 ntBASIC0.71□□□□□ -2.3
CLOCKO15516 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.71□□□□□ -2.3
CLOCKO15516 Y_RNA.256-201ENST00000364594 104 ntBASIC0.71□□□□□ -2.3
CLOCKO15516 Y_RNA.354-201ENST00000365448 111 ntBASIC0.71□□□□□ -2.3
CLOCKO15516 SNORA20B-201ENST00000384220 132 ntBASIC0.71□□□□□ -2.3
CLOCKO15516 MIR100-201ENST00000385259 80 ntBASIC0.71□□□□□ -2.3
CLOCKO15516 RNA5SP482-201ENST00000391269 118 ntBASIC0.71□□□□□ -2.3
CLOCKO15516 MIR942-201ENST00000401111 86 ntBASIC0.71□□□□□ -2.3
CLOCKO15516 RPS3AP1-201ENST00000413190 320 ntBASIC0.71□□□□□ -2.3
CLOCKO15516 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.71□□□□□ -2.3
CLOCKO15516 LINC01399-202ENST00000458450 244 ntBASIC0.71□□□□□ -2.3
CLOCKO15516 RNU7-21P-201ENST00000459430 62 ntBASIC0.71□□□□□ -2.3
CLOCKO15516 AP002004.2-201ENST00000531656 154 ntBASIC0.71□□□□□ -2.3
CLOCKO15516 MIR6866-201ENST00000638146 69 ntBASIC0.71□□□□□ -2.3
CLOCKO15516 AC005592.1-201ENST00000566527 1640 ntBASIC0.71□□□□□ -2.3
CLOCKO15516 Y_RNA.212-201ENST00000364177 102 ntBASIC0.7□□□□□ -2.3
CLOCKO15516 Y_RNA.267-201ENST00000364679 109 ntBASIC0.7□□□□□ -2.3
CLOCKO15516 RNU6-596P-201ENST00000365395 98 ntBASIC0.7□□□□□ -2.3
CLOCKO15516 Y_RNA.405-201ENST00000383979 100 ntBASIC0.7□□□□□ -2.3
CLOCKO15516 Y_RNA.451-201ENST00000384200 100 ntBASIC0.7□□□□□ -2.3
CLOCKO15516 RNU6-281P-201ENST00000384212 103 ntBASIC0.7□□□□□ -2.3
CLOCKO15516 Y_RNA.524-201ENST00000384564 100 ntBASIC0.7□□□□□ -2.3
CLOCKO15516 Y_RNA.561-201ENST00000384694 100 ntBASIC0.7□□□□□ -2.3
CLOCKO15516 MIR598-201ENST00000384868 97 ntBASIC0.7□□□□□ -2.3
CLOCKO15516 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.7□□□□□ -2.3
CLOCKO15516 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC0.7□□□□□ -2.3
CLOCKO15516 MTCYBP4-201ENST00000401524 249 ntBASIC0.7□□□□□ -2.3
CLOCKO15516 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.7□□□□□ -2.3
CLOCKO15516 AL606490.4-201ENST00000423117 127 ntBASIC0.7□□□□□ -2.3
CLOCKO15516 USMG5P1-201ENST00000425964 177 ntBASIC0.7□□□□□ -2.3
CLOCKO15516 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.7□□□□□ -2.3
CLOCKO15516 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC0.7□□□□□ -2.3
CLOCKO15516 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC0.7□□□□□ -2.3
CLOCKO15516 Y_RNA.688-201ENST00000516565 95 ntBASIC0.7□□□□□ -2.3
CLOCKO15516 Y_RNA.704-201ENST00000516851 102 ntBASIC0.7□□□□□ -2.3
CLOCKO15516 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.7□□□□□ -2.3
CLOCKO15516 MIR4273-201ENST00000582824 84 ntBASIC0.7□□□□□ -2.3
CLOCKO15516 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.7□□□□□ -2.3
CLOCKO15516 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
CLOCKO15516 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
CLOCKO15516 SNORA1B-201ENST00000362535 133 ntBASIC0.69□□□□□ -2.3
CLOCKO15516 SNORD116-11-201ENST00000383882 92 ntBASIC0.69□□□□□ -2.3
CLOCKO15516 Y_RNA.533-201ENST00000384596 114 ntBASIC0.69□□□□□ -2.3
CLOCKO15516 RNU6-780P-201ENST00000391030 104 ntBASIC0.69□□□□□ -2.3
CLOCKO15516 MTND5P15-201ENST00000434246 349 ntBASIC0.69□□□□□ -2.3
CLOCKO15516 AC104332.1-201ENST00000440471 797 ntBASIC0.69□□□□□ -2.3
CLOCKO15516 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.69□□□□□ -2.3
CLOCKO15516 RNU7-90P-201ENST00000459216 62 ntBASIC0.69□□□□□ -2.3
CLOCKO15516 RNU6-1114P-201ENST00000516022 107 ntBASIC0.69□□□□□ -2.3
CLOCKO15516 DEFB108E-201ENST00000524692 240 ntBASIC0.69□□□□□ -2.3
CLOCKO15516 AC133485.1-201ENST00000567176 124 ntBASIC0.69□□□□□ -2.3
CLOCKO15516 AC138907.6-201ENST00000568401 126 ntBASIC0.69□□□□□ -2.3
CLOCKO15516 AL117336.2-201ENST00000602435 335 ntBASIC0.69□□□□□ -2.3
CLOCKO15516 AC004832.4-201ENST00000608952 331 ntBASIC0.69□□□□□ -2.3
CLOCKO15516 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC0.69□□□□□ -2.3
CLOCKO15516 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
CLOCKO15516 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.69□□□□□ -2.3
CLOCKO15516 CASC19-280ENST00000642102 1351 ntBASIC0.69□□□□□ -2.3
CLOCKO15516 MIRLET7C-201ENST00000362160 84 ntBASIC0.68□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 125.9 ms