Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 AP000907.4-201ENST00000604143 237 ntBASIC-1.01□□□□□ -2.57
CHD1O14646 Y_RNA.86-201ENST00000363020 111 ntBASIC-1.02□□□□□ -2.57
CHD1O14646 RNU6-161P-201ENST00000363051 106 ntBASIC-1.02□□□□□ -2.57
CHD1O14646 SNORA25.7-201ENST00000364375 127 ntBASIC-1.02□□□□□ -2.57
CHD1O14646 RNU6ATAC6P-201ENST00000408132 126 ntBASIC-1.02□□□□□ -2.57
CHD1O14646 AC009237.7-201ENST00000447357 229 ntBASIC-1.02□□□□□ -2.57
CHD1O14646 SNORA18.7-201ENST00000516910 131 ntBASIC-1.02□□□□□ -2.57
CHD1O14646 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC-1.02□□□□□ -2.57
CHD1O14646 ZNF92P2-201ENST00000600543 1059 ntBASIC-1.02□□□□□ -2.57
CHD1O14646 AC026741.1-201ENST00000605892 482 ntBASIC-1.02□□□□□ -2.57
CHD1O14646 RNU6-88P-201ENST00000606801 100 ntBASIC-1.02□□□□□ -2.57
CHD1O14646 RNU6-511P-201ENST00000363496 107 ntBASIC-1.03□□□□□ -2.57
CHD1O14646 RNU6-187P-201ENST00000384139 106 ntBASIC-1.03□□□□□ -2.57
CHD1O14646 SNORA67.2-201ENST00000384300 149 ntBASIC-1.03□□□□□ -2.57
CHD1O14646 POLR2KP2-201ENST00000438155 177 ntBASIC-1.03□□□□□ -2.57
CHD1O14646 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC-1.03□□□□□ -2.57
CHD1O14646 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC-1.03□□□□□ -2.57
CHD1O14646 SCARNA20.2-201ENST00000516052 116 ntBASIC-1.03□□□□□ -2.57
CHD1O14646 RNU6-469P-201ENST00000516253 101 ntBASIC-1.03□□□□□ -2.57
CHD1O14646 RNU6-63P-201ENST00000516690 95 ntBASIC-1.03□□□□□ -2.57
CHD1O14646 AC106754.1-201ENST00000562632 1513 ntBASIC-1.03□□□□□ -2.57
CHD1O14646 RNU6-236P-201ENST00000363886 106 ntBASIC-1.03□□□□□ -2.58
CHD1O14646 AL512326.2-201ENST00000426359 151 ntBASIC-1.03□□□□□ -2.58
CHD1O14646 SNAP23P1-201ENST00000433229 246 ntBASIC-1.03□□□□□ -2.58
CHD1O14646 AC091951.3-201ENST00000504093 246 ntBASIC-1.03□□□□□ -2.58
CHD1O14646 RN7SKP19-201ENST00000516016 252 ntBASIC-1.03□□□□□ -2.58
CHD1O14646 MTND2P38-201ENST00000522536 667 ntBASIC-1.03□□□□□ -2.58
CHD1O14646 CR383656.4-201ENST00000546909 122 ntBASIC-1.03□□□□□ -2.58
CHD1O14646 AC093023.1-201ENST00000547375 507 ntBASIC-1.03□□□□□ -2.58
CHD1O14646 MIR4676-201ENST00000583078 72 ntBASIC-1.03□□□□□ -2.58
CHD1O14646 MIR4438-201ENST00000585271 93 ntBASIC-1.03□□□□□ -2.58
CHD1O14646 AP000753.3-201ENST00000604083 169 ntBASIC-1.03□□□□□ -2.58
CHD1O14646 AC138649.3-201ENST00000622154 254 ntBASIC-1.03□□□□□ -2.58
CHD1O14646 AL078596.1-201ENST00000624856 447 ntBASIC-1.03□□□□□ -2.58
CHD1O14646 SNORD114-14-201ENST00000362723 75 ntBASIC-1.04□□□□□ -2.58
CHD1O14646 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.04□□□□□ -2.58
CHD1O14646 AC133104.1-201ENST00000429100 218 ntBASIC-1.04□□□□□ -2.58
CHD1O14646 MTCO1P5-201ENST00000433573 344 ntBASIC-1.04□□□□□ -2.58
CHD1O14646 MTCYBP42-201ENST00000444653 1130 ntBASIC-1.04□□□□□ -2.58
CHD1O14646 AL360271.2-201ENST00000447710 161 ntBASIC-1.04□□□□□ -2.58
CHD1O14646 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC-1.04□□□□□ -2.58
CHD1O14646 RNU7-102P-201ENST00000458948 62 ntBASIC-1.04□□□□□ -2.58
CHD1O14646 SCARNA18-201ENST00000459004 134 ntBASIC-1.04□□□□□ -2.58
CHD1O14646 SNORD65B-201ENST00000459126 73 ntBASIC-1.04□□□□□ -2.58
CHD1O14646 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC-1.04□□□□□ -2.58
CHD1O14646 RNU6-1232P-201ENST00000516299 86 ntBASIC-1.04□□□□□ -2.58
CHD1O14646 RNU7-128P-201ENST00000517247 62 ntBASIC-1.04□□□□□ -2.58
CHD1O14646 AC040926.1-201ENST00000530195 238 ntBASIC-1.04□□□□□ -2.58
CHD1O14646 MTND1P8-201ENST00000571424 950 ntBASIC-1.04□□□□□ -2.58
CHD1O14646 AC005562.2-201ENST00000618264 111 ntBASIC-1.04□□□□□ -2.58
CHD1O14646 MTND5P17-201ENST00000418405 1603 ntBASIC-1.04□□□□□ -2.58
CHD1O14646 RNA5SP48-201ENST00000363969 126 ntBASIC-1.05□□□□□ -2.58
CHD1O14646 Y_RNA.311-201ENST00000365068 96 ntBASIC-1.05□□□□□ -2.58
CHD1O14646 MIR125B2-201ENST00000385128 89 ntBASIC-1.05□□□□□ -2.58
CHD1O14646 MTCO2P33-201ENST00000402100 465 ntBASIC-1.05□□□□□ -2.58
CHD1O14646 USP9YP21-201ENST00000420603 432 ntBASIC-1.05□□□□□ -2.58
CHD1O14646 AC079354.2-201ENST00000453523 154 ntBASIC-1.05□□□□□ -2.58
CHD1O14646 AC107297.1-201ENST00000459991 176 ntBASIC-1.05□□□□□ -2.58
CHD1O14646 RNA5SP216-201ENST00000516111 123 ntBASIC-1.05□□□□□ -2.58
CHD1O14646 AP002004.2-201ENST00000531656 154 ntBASIC-1.05□□□□□ -2.58
CHD1O14646 AC133485.4-201ENST00000561835 220 ntBASIC-1.05□□□□□ -2.58
CHD1O14646 Y_RNA.376-201ENST00000365638 108 ntBASIC-1.06□□□□□ -2.58
CHD1O14646 MIR452-201ENST00000385020 85 ntBASIC-1.06□□□□□ -2.58
CHD1O14646 RPL21P38-201ENST00000418090 167 ntBASIC-1.06□□□□□ -2.58
CHD1O14646 PIGPP3-201ENST00000425307 415 ntBASIC-1.06□□□□□ -2.58
CHD1O14646 RNU6-1102P-201ENST00000516149 96 ntBASIC-1.06□□□□□ -2.58
CHD1O14646 OR4H6P-202ENST00000603819 340 ntBASIC-1.06□□□□□ -2.58
CHD1O14646 AC099785.1-201ENST00000605697 437 ntBASIC-1.06□□□□□ -2.58
CHD1O14646 AC144521.1-201ENST00000607148 956 ntBASIC-1.06□□□□□ -2.58
CHD1O14646 SNORD114-11-201ENST00000363738 75 ntBASIC-1.06□□□□□ -2.58
CHD1O14646 Y_RNA.267-201ENST00000364679 109 ntBASIC-1.06□□□□□ -2.58
CHD1O14646 MIR320B2-201ENST00000408479 138 ntBASIC-1.06□□□□□ -2.58
CHD1O14646 USP9YP25-201ENST00000457708 443 ntBASIC-1.06□□□□□ -2.58
CHD1O14646 AC091885.1-201ENST00000506658 268 ntBASIC-1.06□□□□□ -2.58
CHD1O14646 AC091133.4-201ENST00000511142 308 ntBASIC-1.06□□□□□ -2.58
CHD1O14646 AC021146.9-201ENST00000512503 156 ntBASIC-1.06□□□□□ -2.58
CHD1O14646 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC-1.06□□□□□ -2.58
CHD1O14646 AC026470.2-201ENST00000561492 181 ntBASIC-1.06□□□□□ -2.58
CHD1O14646 MTND4LP25-201ENST00000570218 163 ntBASIC-1.06□□□□□ -2.58
CHD1O14646 MIR3115-201ENST00000577915 68 ntBASIC-1.06□□□□□ -2.58
CHD1O14646 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC-1.06□□□□□ -2.58
CHD1O14646 AC010525.2-201ENST00000590920 195 ntBASIC-1.06□□□□□ -2.58
CHD1O14646 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC-1.06□□□□□ -2.58
CHD1O14646 MIR4251-201ENST00000635819 61 ntBASIC-1.06□□□□□ -2.58
CHD1O14646 Y_RNA.57-201ENST00000362806 113 ntBASIC-1.07□□□□□ -2.58
CHD1O14646 Y_RNA.326-201ENST00000365176 113 ntBASIC-1.07□□□□□ -2.58
CHD1O14646 AC243428.1-201ENST00000421099 264 ntBASIC-1.07□□□□□ -2.58
CHD1O14646 AC117522.1-201ENST00000509821 380 ntBASIC-1.07□□□□□ -2.58
CHD1O14646 Y_RNA.684-201ENST00000516510 99 ntBASIC-1.07□□□□□ -2.58
CHD1O14646 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC-1.07□□□□□ -2.58
CHD1O14646 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC-1.07□□□□□ -2.58
CHD1O14646 AL008636.1-201ENST00000625038 1018 ntBASIC-1.07□□□□□ -2.58
CHD1O14646 UGP2-231ENST00000627474 264 ntTSL 5 BASIC-1.07□□□□□ -2.58
CHD1O14646 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC-1.07□□□□□ -2.58
CHD1O14646 MIR101-2-201ENST00000362195 79 ntBASIC-1.08□□□□□ -2.58
CHD1O14646 SNORA1B-201ENST00000362535 133 ntBASIC-1.08□□□□□ -2.58
CHD1O14646 MTCO3P8-201ENST00000453691 755 ntBASIC-1.08□□□□□ -2.58
CHD1O14646 RNU6-1116P-201ENST00000517269 99 ntBASIC-1.08□□□□□ -2.58
CHD1O14646 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC-1.08□□□□□ -2.58
CHD1O14646 AC087683.1-201ENST00000591187 441 ntBASIC-1.08□□□□□ -2.58
Retrieved 100 of 98,524 protein–RNA pairs in 122.3 ms