Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 ZNF736P4Y-201ENST00000454995 1243 ntBASIC-1.19□□□□□ -2.6
RGPD3A6NKT7 RNU7-73P-201ENST00000458743 63 ntBASIC-1.19□□□□□ -2.6
RGPD3A6NKT7 AC010486.2-201ENST00000505572 483 ntBASIC-1.19□□□□□ -2.6
RGPD3A6NKT7 AC119751.4-201ENST00000507498 357 ntBASIC-1.19□□□□□ -2.6
RGPD3A6NKT7 AC046134.1-201ENST00000514454 666 ntBASIC-1.19□□□□□ -2.6
RGPD3A6NKT7 AC105029.1-201ENST00000520250 669 ntBASIC-1.19□□□□□ -2.6
RGPD3A6NKT7 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC-1.19□□□□□ -2.6
RGPD3A6NKT7 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC-1.19□□□□□ -2.6
RGPD3A6NKT7 AL359999.1-201ENST00000604513 294 ntBASIC-1.19□□□□□ -2.6
RGPD3A6NKT7 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-1.19□□□□□ -2.6
RGPD3A6NKT7 RNA5SP205-201ENST00000364653 136 ntBASIC-1.2□□□□□ -2.6
RGPD3A6NKT7 Y_RNA.376-201ENST00000365638 108 ntBASIC-1.2□□□□□ -2.6
RGPD3A6NKT7 Y_RNA.452-201ENST00000384202 108 ntBASIC-1.2□□□□□ -2.6
RGPD3A6NKT7 Y_RNA.498-201ENST00000384460 102 ntBASIC-1.2□□□□□ -2.6
RGPD3A6NKT7 MIR204-201ENST00000385200 110 ntBASIC-1.2□□□□□ -2.6
RGPD3A6NKT7 AC015818.7-201ENST00000428754 109 ntBASIC-1.2□□□□□ -2.6
RGPD3A6NKT7 AC087499.7-201ENST00000441958 109 ntBASIC-1.2□□□□□ -2.6
RGPD3A6NKT7 AC104563.1-201ENST00000476147 376 ntBASIC-1.2□□□□□ -2.6
RGPD3A6NKT7 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC-1.2□□□□□ -2.6
RGPD3A6NKT7 AC068587.5-201ENST00000528506 175 ntBASIC-1.2□□□□□ -2.6
RGPD3A6NKT7 AP001330.5-201ENST00000607176 411 ntBASIC-1.2□□□□□ -2.6
RGPD3A6NKT7 AC012467.1-201ENST00000607740 256 ntBASIC-1.2□□□□□ -2.6
RGPD3A6NKT7 RNU6-873P-201ENST00000363833 107 ntBASIC-1.21□□□□□ -2.6
RGPD3A6NKT7 RNU6-371P-201ENST00000364283 108 ntBASIC-1.21□□□□□ -2.6
RGPD3A6NKT7 AL133396.1-201ENST00000432048 687 ntBASIC-1.21□□□□□ -2.6
RGPD3A6NKT7 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC-1.21□□□□□ -2.6
RGPD3A6NKT7 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC-1.21□□□□□ -2.6
RGPD3A6NKT7 AC006441.5-201ENST00000612680 209 ntBASIC-1.21□□□□□ -2.6
RGPD3A6NKT7 AC244669.1-204ENST00000621564 178 ntBASIC-1.21□□□□□ -2.6
RGPD3A6NKT7 snoZ196.1-201ENST00000625269 89 ntBASIC-1.21□□□□□ -2.6
RGPD3A6NKT7 MIR377-201ENST00000362145 69 ntBASIC-1.21□□□□□ -2.6
RGPD3A6NKT7 RNU6-1336P-201ENST00000383886 109 ntBASIC-1.21□□□□□ -2.6
RGPD3A6NKT7 RNU6-1179P-201ENST00000384667 107 ntBASIC-1.21□□□□□ -2.6
RGPD3A6NKT7 MIR1285-2-201ENST00000408311 88 ntBASIC-1.21□□□□□ -2.6
RGPD3A6NKT7 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC-1.21□□□□□ -2.6
RGPD3A6NKT7 PRDX4P1-201ENST00000507189 574 ntBASIC-1.21□□□□□ -2.6
RGPD3A6NKT7 RNU6-881P-201ENST00000516813 102 ntBASIC-1.21□□□□□ -2.6
RGPD3A6NKT7 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC-1.21□□□□□ -2.6
RGPD3A6NKT7 MIR3146-201ENST00000580367 79 ntBASIC-1.21□□□□□ -2.6
RGPD3A6NKT7 uc_338.4-201ENST00000616635 176 ntBASIC-1.21□□□□□ -2.6
RGPD3A6NKT7 AL008636.1-201ENST00000625038 1018 ntBASIC-1.21□□□□□ -2.6
RGPD3A6NKT7 MIR4251-201ENST00000635819 61 ntBASIC-1.21□□□□□ -2.6
RGPD3A6NKT7 AC093726.3-201ENST00000637588 150 ntBASIC-1.21□□□□□ -2.6
RGPD3A6NKT7 RNU6-1084P-201ENST00000362498 107 ntBASIC-1.22□□□□□ -2.6
RGPD3A6NKT7 SNORD114-25-201ENST00000363742 72 ntBASIC-1.22□□□□□ -2.6
RGPD3A6NKT7 RNU5E-6P-201ENST00000365574 115 ntBASIC-1.22□□□□□ -2.6
RGPD3A6NKT7 AL358934.1-201ENST00000432346 324 ntBASIC-1.22□□□□□ -2.6
RGPD3A6NKT7 RNU7-185P-201ENST00000459215 60 ntBASIC-1.22□□□□□ -2.6
RGPD3A6NKT7 RNU6-1116P-201ENST00000517269 99 ntBASIC-1.22□□□□□ -2.6
RGPD3A6NKT7 AC103996.1-201ENST00000555468 102 ntBASIC-1.22□□□□□ -2.6
RGPD3A6NKT7 MIR3115-201ENST00000577915 68 ntBASIC-1.22□□□□□ -2.6
RGPD3A6NKT7 AC006380.1-201ENST00000603598 186 ntBASIC-1.22□□□□□ -2.6
RGPD3A6NKT7 AC097478.2-201ENST00000610572 514 ntBASIC-1.22□□□□□ -2.6
RGPD3A6NKT7 RNU6-116P-201ENST00000384042 109 ntBASIC-1.23□□□□□ -2.61
RGPD3A6NKT7 MIR586-201ENST00000385035 97 ntBASIC-1.23□□□□□ -2.61
RGPD3A6NKT7 MIR516B2-201ENST00000385190 85 ntBASIC-1.23□□□□□ -2.61
RGPD3A6NKT7 MT-TY-201ENST00000387409 66 ntBASIC-1.23□□□□□ -2.61
RGPD3A6NKT7 AL355143.1-201ENST00000407101 841 ntBASIC-1.23□□□□□ -2.61
RGPD3A6NKT7 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC-1.23□□□□□ -2.61
RGPD3A6NKT7 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC-1.23□□□□□ -2.61
RGPD3A6NKT7 SNORD65B-201ENST00000459126 73 ntBASIC-1.23□□□□□ -2.61
RGPD3A6NKT7 RNU6-1291P-201ENST00000516591 104 ntBASIC-1.23□□□□□ -2.61
RGPD3A6NKT7 RNU7-128P-201ENST00000517247 62 ntBASIC-1.23□□□□□ -2.61
RGPD3A6NKT7 AC099786.3-201ENST00000565735 1410 ntBASIC-1.23□□□□□ -2.61
RGPD3A6NKT7 MIR148A-201ENST00000362215 68 ntBASIC-1.24□□□□□ -2.61
RGPD3A6NKT7 SNORA63C-201ENST00000364578 129 ntBASIC-1.24□□□□□ -2.61
RGPD3A6NKT7 SNORD28-201ENST00000384706 75 ntBASIC-1.24□□□□□ -2.61
RGPD3A6NKT7 MIR516B1-201ENST00000385211 90 ntBASIC-1.24□□□□□ -2.61
RGPD3A6NKT7 AC098592.1-201ENST00000419352 333 ntBASIC-1.24□□□□□ -2.61
RGPD3A6NKT7 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC-1.24□□□□□ -2.61
RGPD3A6NKT7 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC-1.24□□□□□ -2.61
RGPD3A6NKT7 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC-1.24□□□□□ -2.61
RGPD3A6NKT7 AC008628.2-201ENST00000502605 298 ntBASIC-1.24□□□□□ -2.61
RGPD3A6NKT7 SNORA31.14-201ENST00000516728 116 ntBASIC-1.24□□□□□ -2.61
RGPD3A6NKT7 RNU6-58P-201ENST00000517143 103 ntBASIC-1.24□□□□□ -2.61
RGPD3A6NKT7 RNA5SP47-201ENST00000517230 109 ntBASIC-1.24□□□□□ -2.61
RGPD3A6NKT7 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC-1.24□□□□□ -2.61
RGPD3A6NKT7 AC100814.1-201ENST00000606963 623 ntBASIC-1.24□□□□□ -2.61
RGPD3A6NKT7 AC010205.1-201ENST00000616668 449 ntBASIC-1.24□□□□□ -2.61
RGPD3A6NKT7 SNORA1B-201ENST00000362535 133 ntBASIC-1.24□□□□□ -2.61
RGPD3A6NKT7 RNU6-428P-201ENST00000362942 107 ntBASIC-1.24□□□□□ -2.61
RGPD3A6NKT7 RNU6-289P-201ENST00000364093 107 ntBASIC-1.24□□□□□ -2.61
RGPD3A6NKT7 Y_RNA.270-201ENST00000364693 104 ntBASIC-1.24□□□□□ -2.61
RGPD3A6NKT7 RNU6-205P-201ENST00000390858 107 ntBASIC-1.24□□□□□ -2.61
RGPD3A6NKT7 RNU6-1133P-201ENST00000410963 100 ntBASIC-1.24□□□□□ -2.61
RGPD3A6NKT7 AC008134.1-201ENST00000420943 193 ntBASIC-1.24□□□□□ -2.61
RGPD3A6NKT7 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC-1.24□□□□□ -2.61
RGPD3A6NKT7 ZNF736P8Y-201ENST00000451913 669 ntBASIC-1.24□□□□□ -2.61
RGPD3A6NKT7 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC-1.24□□□□□ -2.61
RGPD3A6NKT7 RNU6-341P-201ENST00000516973 96 ntBASIC-1.24□□□□□ -2.61
RGPD3A6NKT7 RNA5SP66-201ENST00000517178 101 ntBASIC-1.24□□□□□ -2.61
RGPD3A6NKT7 MIR4280-201ENST00000582178 76 ntBASIC-1.24□□□□□ -2.61
RGPD3A6NKT7 AC084368.1-201ENST00000620935 65 ntBASIC-1.24□□□□□ -2.61
RGPD3A6NKT7 Y_RNA.125-201ENST00000363371 111 ntBASIC-1.25□□□□□ -2.61
RGPD3A6NKT7 Y_RNA.326-201ENST00000365176 113 ntBASIC-1.25□□□□□ -2.61
RGPD3A6NKT7 AC117470.1-201ENST00000381974 330 ntBASIC-1.25□□□□□ -2.61
RGPD3A6NKT7 Y_RNA.413-201ENST00000384007 102 ntBASIC-1.25□□□□□ -2.61
RGPD3A6NKT7 RNU2-54P-201ENST00000410299 190 ntBASIC-1.25□□□□□ -2.61
RGPD3A6NKT7 AL590623.1-201ENST00000427864 105 ntBASIC-1.25□□□□□ -2.61
RGPD3A6NKT7 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC-1.25□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms