Protein–RNA interactions for Protein: A6NCS4

NKX2-6, Homeobox protein Nkx-2.6, humanhuman

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-6A6NCS4 Y_RNA.259-201ENST00000364619 101 ntBASIC1.2□□□□□ -2.22
NKX2-6A6NCS4 RNU6-1240P-201ENST00000365155 104 ntBASIC1.2□□□□□ -2.22
NKX2-6A6NCS4 Y_RNA.387-201ENST00000383918 102 ntBASIC1.2□□□□□ -2.22
NKX2-6A6NCS4 RNU6-926P-201ENST00000384075 107 ntBASIC1.2□□□□□ -2.22
NKX2-6A6NCS4 RNU6-1297P-201ENST00000384415 104 ntBASIC1.2□□□□□ -2.22
NKX2-6A6NCS4 MIR150-201ENST00000385048 84 ntBASIC1.2□□□□□ -2.22
NKX2-6A6NCS4 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
NKX2-6A6NCS4 RNU2-7P-201ENST00000410794 178 ntBASIC1.2□□□□□ -2.22
NKX2-6A6NCS4 ELOCP21-201ENST00000412558 336 ntBASIC1.2□□□□□ -2.22
NKX2-6A6NCS4 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.2□□□□□ -2.22
NKX2-6A6NCS4 HSPE1P9-201ENST00000440046 311 ntBASIC1.2□□□□□ -2.22
NKX2-6A6NCS4 AC093019.1-201ENST00000443135 252 ntBASIC1.2□□□□□ -2.22
NKX2-6A6NCS4 AC073910.1-201ENST00000445047 438 ntBASIC1.2□□□□□ -2.22
NKX2-6A6NCS4 MTND5P20-201ENST00000448677 143 ntBASIC1.2□□□□□ -2.22
NKX2-6A6NCS4 AC074290.1-201ENST00000448883 135 ntBASIC1.2□□□□□ -2.22
NKX2-6A6NCS4 Y_RNA.653-201ENST00000459091 95 ntBASIC1.2□□□□□ -2.22
NKX2-6A6NCS4 Y_RNA.718-201ENST00000517110 102 ntBASIC1.2□□□□□ -2.22
NKX2-6A6NCS4 RNU6-264P-201ENST00000517134 104 ntBASIC1.2□□□□□ -2.22
NKX2-6A6NCS4 AP002001.1-203ENST00000534002 267 ntBASIC1.2□□□□□ -2.22
NKX2-6A6NCS4 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC1.2□□□□□ -2.22
NKX2-6A6NCS4 AC069114.2-201ENST00000604699 304 ntBASIC1.2□□□□□ -2.22
NKX2-6A6NCS4 AC016925.2-201ENST00000605108 242 ntBASIC1.2□□□□□ -2.22
NKX2-6A6NCS4 PRR13P7-201ENST00000605538 430 ntBASIC1.2□□□□□ -2.22
NKX2-6A6NCS4 Y_RNA.804-201ENST00000615262 101 ntBASIC1.2□□□□□ -2.22
NKX2-6A6NCS4 MIR6734-201ENST00000621166 68 ntBASIC1.2□□□□□ -2.22
NKX2-6A6NCS4 AL359697.1-201ENST00000624879 587 ntBASIC1.2□□□□□ -2.22
NKX2-6A6NCS4 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.2□□□□□ -2.22
NKX2-6A6NCS4 RNU6-1019P-201ENST00000364424 107 ntBASIC1.19□□□□□ -2.22
NKX2-6A6NCS4 Y_RNA.384-201ENST00000383909 102 ntBASIC1.19□□□□□ -2.22
NKX2-6A6NCS4 RNU6-708P-201ENST00000384217 107 ntBASIC1.19□□□□□ -2.22
NKX2-6A6NCS4 RNU6-1145P-201ENST00000384246 107 ntBASIC1.19□□□□□ -2.22
NKX2-6A6NCS4 RNA5SP109-201ENST00000391010 116 ntBASIC1.19□□□□□ -2.22
NKX2-6A6NCS4 RNY4P36-201ENST00000391116 96 ntBASIC1.19□□□□□ -2.22
NKX2-6A6NCS4 RNU6-1186P-201ENST00000410429 97 ntBASIC1.19□□□□□ -2.22
NKX2-6A6NCS4 AC114482.1-201ENST00000418010 247 ntBASIC1.19□□□□□ -2.22
NKX2-6A6NCS4 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.19□□□□□ -2.22
NKX2-6A6NCS4 AL606517.2-201ENST00000442855 241 ntBASIC1.19□□□□□ -2.22
NKX2-6A6NCS4 UQCRBP2-201ENST00000447827 297 ntBASIC1.19□□□□□ -2.22
NKX2-6A6NCS4 AL163195.1-201ENST00000496941 348 ntBASIC1.19□□□□□ -2.22
NKX2-6A6NCS4 Y_RNA.702-201ENST00000516843 96 ntBASIC1.19□□□□□ -2.22
NKX2-6A6NCS4 RNU6-699P-201ENST00000517081 110 ntBASIC1.19□□□□□ -2.22
NKX2-6A6NCS4 AC023157.2-201ENST00000540596 141 ntBASIC1.19□□□□□ -2.22
NKX2-6A6NCS4 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.19□□□□□ -2.22
NKX2-6A6NCS4 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.19□□□□□ -2.22
NKX2-6A6NCS4 AC095038.3-201ENST00000634439 195 ntBASIC1.19□□□□□ -2.22
NKX2-6A6NCS4 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.19□□□□□ -2.22
NKX2-6A6NCS4 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.18□□□□□ -2.22
NKX2-6A6NCS4 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.18□□□□□ -2.22
NKX2-6A6NCS4 MIR424-201ENST00000362227 98 ntBASIC1.18□□□□□ -2.22
NKX2-6A6NCS4 RNU6-42P-201ENST00000384165 107 ntBASIC1.18□□□□□ -2.22
NKX2-6A6NCS4 Y_RNA.466-201ENST00000384294 113 ntBASIC1.18□□□□□ -2.22
NKX2-6A6NCS4 MIR520A-201ENST00000384862 85 ntBASIC1.18□□□□□ -2.22
NKX2-6A6NCS4 MIR559-201ENST00000385188 96 ntBASIC1.18□□□□□ -2.22
NKX2-6A6NCS4 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.18□□□□□ -2.22
NKX2-6A6NCS4 RNU6-1009P-201ENST00000390996 107 ntBASIC1.18□□□□□ -2.22
NKX2-6A6NCS4 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.18□□□□□ -2.22
NKX2-6A6NCS4 CST2P1-201ENST00000425770 87 ntBASIC1.18□□□□□ -2.22
NKX2-6A6NCS4 CHEK2P4-201ENST00000450340 246 ntBASIC1.18□□□□□ -2.22
NKX2-6A6NCS4 SNORD65B-201ENST00000459126 73 ntBASIC1.18□□□□□ -2.22
NKX2-6A6NCS4 RNU6-307P-201ENST00000516743 106 ntBASIC1.18□□□□□ -2.22
NKX2-6A6NCS4 SNORA44.1-201ENST00000517031 108 ntBASIC1.18□□□□□ -2.22
NKX2-6A6NCS4 AC011604.1-201ENST00000545978 196 ntBASIC1.18□□□□□ -2.22
NKX2-6A6NCS4 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.18□□□□□ -2.22
NKX2-6A6NCS4 AC136443.5-201ENST00000603741 370 ntBASIC1.18□□□□□ -2.22
NKX2-6A6NCS4 AC080078.3-201ENST00000605407 463 ntBASIC1.18□□□□□ -2.22
NKX2-6A6NCS4 U6.108-201ENST00000637764 58 ntBASIC1.18□□□□□ -2.22
NKX2-6A6NCS4 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
NKX2-6A6NCS4 MIR96-201ENST00000362288 78 ntBASIC1.17□□□□□ -2.22
NKX2-6A6NCS4 RNU6-1301P-201ENST00000362724 104 ntBASIC1.17□□□□□ -2.22
NKX2-6A6NCS4 RNU1-22P-201ENST00000363334 158 ntBASIC1.17□□□□□ -2.22
NKX2-6A6NCS4 SNORD114-27-201ENST00000363766 70 ntBASIC1.17□□□□□ -2.22
NKX2-6A6NCS4 Y_RNA.314-201ENST00000365114 102 ntBASIC1.17□□□□□ -2.22
NKX2-6A6NCS4 RNU6-203P-201ENST00000384038 104 ntBASIC1.17□□□□□ -2.22
NKX2-6A6NCS4 Y_RNA.498-201ENST00000384460 102 ntBASIC1.17□□□□□ -2.22
NKX2-6A6NCS4 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
NKX2-6A6NCS4 SNORA69.1-201ENST00000390904 137 ntBASIC1.17□□□□□ -2.22
NKX2-6A6NCS4 RNA5SP323-201ENST00000391094 133 ntBASIC1.17□□□□□ -2.22
NKX2-6A6NCS4 SNORD12B-201ENST00000410433 91 ntBASIC1.17□□□□□ -2.22
NKX2-6A6NCS4 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.17□□□□□ -2.22
NKX2-6A6NCS4 AC010154.1-201ENST00000425857 269 ntBASIC1.17□□□□□ -2.22
NKX2-6A6NCS4 PCNPP5-201ENST00000452246 481 ntBASIC1.17□□□□□ -2.22
NKX2-6A6NCS4 AC004223.1-201ENST00000479840 271 ntBASIC1.17□□□□□ -2.22
NKX2-6A6NCS4 RNA5SP220-201ENST00000516298 104 ntBASIC1.17□□□□□ -2.22
NKX2-6A6NCS4 AC018448.1-201ENST00000552843 316 ntBASIC1.17□□□□□ -2.22
NKX2-6A6NCS4 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.17□□□□□ -2.22
NKX2-6A6NCS4 AC055872.1-201ENST00000570978 278 ntBASIC1.17□□□□□ -2.22
NKX2-6A6NCS4 MIR4795-201ENST00000584182 89 ntBASIC1.17□□□□□ -2.22
NKX2-6A6NCS4 AL353149.1-201ENST00000610667 244 ntBASIC1.17□□□□□ -2.22
NKX2-6A6NCS4 AC104985.2-201ENST00000620598 500 ntBASIC1.17□□□□□ -2.22
NKX2-6A6NCS4 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
NKX2-6A6NCS4 RNU6-454P-201ENST00000364292 107 ntBASIC1.16□□□□□ -2.22
NKX2-6A6NCS4 Y_RNA.263-201ENST00000364659 114 ntBASIC1.16□□□□□ -2.22
NKX2-6A6NCS4 RNU6-338P-201ENST00000383888 105 ntBASIC1.16□□□□□ -2.22
NKX2-6A6NCS4 Y_RNA.577-201ENST00000384794 101 ntBASIC1.16□□□□□ -2.22
NKX2-6A6NCS4 AL355796.1-201ENST00000406706 323 ntBASIC1.16□□□□□ -2.22
NKX2-6A6NCS4 Y_RNA.592-201ENST00000410274 109 ntBASIC1.16□□□□□ -2.22
NKX2-6A6NCS4 Y_RNA.605-201ENST00000410577 105 ntBASIC1.16□□□□□ -2.22
NKX2-6A6NCS4 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.16□□□□□ -2.22
NKX2-6A6NCS4 RPL30P13-201ENST00000418873 348 ntBASIC1.16□□□□□ -2.22
NKX2-6A6NCS4 MTATP6P23-201ENST00000440153 476 ntBASIC1.16□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 166.3 ms