Protein–RNA interactions for Protein: A0A0B4J1X8

IGHV3-43, Immunoglobulin heavy variable 3-43, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-43A0A0B4J1X8 SNORD111.1-201ENST00000516421 86 ntBASIC0.53□□□□□ -2.32
IGHV3-43A0A0B4J1X8 RNU6-341P-201ENST00000516973 96 ntBASIC0.53□□□□□ -2.32
IGHV3-43A0A0B4J1X8 AP002004.2-201ENST00000531656 154 ntBASIC0.53□□□□□ -2.32
IGHV3-43A0A0B4J1X8 AC004812.1-201ENST00000540773 146 ntBASIC0.53□□□□□ -2.32
IGHV3-43A0A0B4J1X8 MIR4653-201ENST00000585107 83 ntBASIC0.53□□□□□ -2.32
IGHV3-43A0A0B4J1X8 AL590095.2-201ENST00000604136 117 ntBASIC0.53□□□□□ -2.32
IGHV3-43A0A0B4J1X8 AC092954.2-201ENST00000609103 430 ntBASIC0.53□□□□□ -2.32
IGHV3-43A0A0B4J1X8 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
IGHV3-43A0A0B4J1X8 Y_RNA.164-201ENST00000363709 102 ntBASIC0.52□□□□□ -2.33
IGHV3-43A0A0B4J1X8 Y_RNA.212-201ENST00000364177 102 ntBASIC0.52□□□□□ -2.33
IGHV3-43A0A0B4J1X8 Y_RNA.256-201ENST00000364594 104 ntBASIC0.52□□□□□ -2.33
IGHV3-43A0A0B4J1X8 Y_RNA.405-201ENST00000383979 100 ntBASIC0.52□□□□□ -2.33
IGHV3-43A0A0B4J1X8 RNU6-483P-201ENST00000384088 108 ntBASIC0.52□□□□□ -2.33
IGHV3-43A0A0B4J1X8 Y_RNA.451-201ENST00000384200 100 ntBASIC0.52□□□□□ -2.33
IGHV3-43A0A0B4J1X8 SNORD116-13-201ENST00000384408 92 ntBASIC0.52□□□□□ -2.33
IGHV3-43A0A0B4J1X8 Y_RNA.524-201ENST00000384564 100 ntBASIC0.52□□□□□ -2.33
IGHV3-43A0A0B4J1X8 Y_RNA.533-201ENST00000384596 114 ntBASIC0.52□□□□□ -2.33
IGHV3-43A0A0B4J1X8 RNU6-306P-201ENST00000384617 107 ntBASIC0.52□□□□□ -2.33
IGHV3-43A0A0B4J1X8 Y_RNA.561-201ENST00000384694 100 ntBASIC0.52□□□□□ -2.33
IGHV3-43A0A0B4J1X8 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC0.52□□□□□ -2.33
IGHV3-43A0A0B4J1X8 RNA5SP482-201ENST00000391269 118 ntBASIC0.52□□□□□ -2.33
IGHV3-43A0A0B4J1X8 MIR1276-201ENST00000408707 83 ntBASIC0.52□□□□□ -2.33
IGHV3-43A0A0B4J1X8 ZNF885P-201ENST00000420174 1098 ntBASIC0.52□□□□□ -2.33
IGHV3-43A0A0B4J1X8 AC018865.2-201ENST00000423631 129 ntBASIC0.52□□□□□ -2.33
IGHV3-43A0A0B4J1X8 MTND3P23-201ENST00000431980 347 ntBASIC0.52□□□□□ -2.33
IGHV3-43A0A0B4J1X8 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.52□□□□□ -2.33
IGHV3-43A0A0B4J1X8 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC0.52□□□□□ -2.33
IGHV3-43A0A0B4J1X8 AC245047.8-201ENST00000456455 284 ntBASIC0.52□□□□□ -2.33
IGHV3-43A0A0B4J1X8 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC0.52□□□□□ -2.33
IGHV3-43A0A0B4J1X8 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.52□□□□□ -2.33
IGHV3-43A0A0B4J1X8 AC019235.1-201ENST00000503847 207 ntBASIC0.52□□□□□ -2.33
IGHV3-43A0A0B4J1X8 RNA5SP255-201ENST00000516370 107 ntBASIC0.52□□□□□ -2.33
IGHV3-43A0A0B4J1X8 RNU6-1291P-201ENST00000516591 104 ntBASIC0.52□□□□□ -2.33
IGHV3-43A0A0B4J1X8 AC133485.1-201ENST00000567176 124 ntBASIC0.52□□□□□ -2.33
IGHV3-43A0A0B4J1X8 AC138907.6-201ENST00000568401 126 ntBASIC0.52□□□□□ -2.33
IGHV3-43A0A0B4J1X8 MIR4273-201ENST00000582824 84 ntBASIC0.52□□□□□ -2.33
IGHV3-43A0A0B4J1X8 MIR3672-201ENST00000584290 82 ntBASIC0.52□□□□□ -2.33
IGHV3-43A0A0B4J1X8 AC091178.2-201ENST00000584401 117 ntBASIC0.52□□□□□ -2.33
IGHV3-43A0A0B4J1X8 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.52□□□□□ -2.33
IGHV3-43A0A0B4J1X8 AC004832.4-201ENST00000608952 331 ntBASIC0.52□□□□□ -2.33
IGHV3-43A0A0B4J1X8 Z99129.1-201ENST00000612510 255 ntBASIC0.52□□□□□ -2.33
IGHV3-43A0A0B4J1X8 RNU6-222P-201ENST00000362438 107 ntBASIC0.51□□□□□ -2.33
IGHV3-43A0A0B4J1X8 RNA5SP361-201ENST00000362686 118 ntBASIC0.51□□□□□ -2.33
IGHV3-43A0A0B4J1X8 RNU6-908P-201ENST00000410160 94 ntBASIC0.51□□□□□ -2.33
IGHV3-43A0A0B4J1X8 USMG5P1-201ENST00000425964 177 ntBASIC0.51□□□□□ -2.33
IGHV3-43A0A0B4J1X8 USP9YP16-201ENST00000430287 407 ntBASIC0.51□□□□□ -2.33
IGHV3-43A0A0B4J1X8 RPEP5-201ENST00000441137 268 ntBASIC0.51□□□□□ -2.33
IGHV3-43A0A0B4J1X8 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.51□□□□□ -2.33
IGHV3-43A0A0B4J1X8 USP9YP23-201ENST00000455085 407 ntBASIC0.51□□□□□ -2.33
IGHV3-43A0A0B4J1X8 AC046134.1-201ENST00000514454 666 ntBASIC0.51□□□□□ -2.33
IGHV3-43A0A0B4J1X8 RNA5SP20-201ENST00000515976 84 ntBASIC0.51□□□□□ -2.33
IGHV3-43A0A0B4J1X8 RNU6-1114P-201ENST00000516022 107 ntBASIC0.51□□□□□ -2.33
IGHV3-43A0A0B4J1X8 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.51□□□□□ -2.33
IGHV3-43A0A0B4J1X8 AP003484.1-201ENST00000530974 250 ntBASIC0.51□□□□□ -2.33
IGHV3-43A0A0B4J1X8 AC093023.1-201ENST00000547375 507 ntBASIC0.51□□□□□ -2.33
IGHV3-43A0A0B4J1X8 CYP3A137P-201ENST00000562436 69 ntBASIC0.51□□□□□ -2.33
IGHV3-43A0A0B4J1X8 AL096861.1-201ENST00000610899 123 ntBASIC0.51□□□□□ -2.33
IGHV3-43A0A0B4J1X8 MIR8070-201ENST00000616510 88 ntBASIC0.51□□□□□ -2.33
IGHV3-43A0A0B4J1X8 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.51□□□□□ -2.33
IGHV3-43A0A0B4J1X8 ZNF299P-201ENST00000406845 1804 ntBASIC0.5□□□□□ -2.33
IGHV3-43A0A0B4J1X8 CASC19-280ENST00000642102 1351 ntBASIC0.5□□□□□ -2.33
IGHV3-43A0A0B4J1X8 MIRLET7C-201ENST00000362160 84 ntBASIC0.5□□□□□ -2.33
IGHV3-43A0A0B4J1X8 Y_RNA.4-201ENST00000362333 112 ntBASIC0.5□□□□□ -2.33
IGHV3-43A0A0B4J1X8 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC0.5□□□□□ -2.33
IGHV3-43A0A0B4J1X8 Y_RNA.414-201ENST00000384011 101 ntBASIC0.5□□□□□ -2.33
IGHV3-43A0A0B4J1X8 RNU1-139P-201ENST00000391307 165 ntBASIC0.5□□□□□ -2.33
IGHV3-43A0A0B4J1X8 MTCYBP4-201ENST00000401524 249 ntBASIC0.5□□□□□ -2.33
IGHV3-43A0A0B4J1X8 RPS26P5-201ENST00000418544 335 ntBASIC0.5□□□□□ -2.33
IGHV3-43A0A0B4J1X8 AL049830.1-201ENST00000468034 425 ntBASIC0.5□□□□□ -2.33
IGHV3-43A0A0B4J1X8 SNORA70.12-201ENST00000516084 153 ntBASIC0.5□□□□□ -2.33
IGHV3-43A0A0B4J1X8 RNU6-1278P-201ENST00000516130 107 ntBASIC0.5□□□□□ -2.33
IGHV3-43A0A0B4J1X8 Y_RNA.706-201ENST00000516933 99 ntBASIC0.5□□□□□ -2.33
IGHV3-43A0A0B4J1X8 NBR2-204ENST00000587322 63 ntBASIC0.5□□□□□ -2.33
IGHV3-43A0A0B4J1X8 PRELID3BP2-201ENST00000605362 201 ntBASIC0.5□□□□□ -2.33
IGHV3-43A0A0B4J1X8 AL391903.3-201ENST00000612158 163 ntBASIC0.5□□□□□ -2.33
IGHV3-43A0A0B4J1X8 SNORA27.1-201ENST00000362604 124 ntBASIC0.49□□□□□ -2.33
IGHV3-43A0A0B4J1X8 RNU6-451P-201ENST00000362921 107 ntBASIC0.49□□□□□ -2.33
IGHV3-43A0A0B4J1X8 RNY3P3-201ENST00000363816 102 ntBASIC0.49□□□□□ -2.33
IGHV3-43A0A0B4J1X8 RNU4-12P-201ENST00000365233 139 ntBASIC0.49□□□□□ -2.33
IGHV3-43A0A0B4J1X8 SNORD116-11-201ENST00000383882 92 ntBASIC0.49□□□□□ -2.33
IGHV3-43A0A0B4J1X8 RNU6-1264P-201ENST00000383891 107 ntBASIC0.49□□□□□ -2.33
IGHV3-43A0A0B4J1X8 SNORD116-9-201ENST00000384000 95 ntBASIC0.49□□□□□ -2.33
IGHV3-43A0A0B4J1X8 RNU6-281P-201ENST00000384212 103 ntBASIC0.49□□□□□ -2.33
IGHV3-43A0A0B4J1X8 SNORD116-3-201ENST00000384287 95 ntBASIC0.49□□□□□ -2.33
IGHV3-43A0A0B4J1X8 SNORD116-7-201ENST00000384404 95 ntBASIC0.49□□□□□ -2.33
IGHV3-43A0A0B4J1X8 SNORD116-5-201ENST00000384462 95 ntBASIC0.49□□□□□ -2.33
IGHV3-43A0A0B4J1X8 MIR526A1-201ENST00000384897 85 ntBASIC0.49□□□□□ -2.33
IGHV3-43A0A0B4J1X8 MIR92A1-201ENST00000385233 78 ntBASIC0.49□□□□□ -2.33
IGHV3-43A0A0B4J1X8 RNU6-332P-201ENST00000391193 108 ntBASIC0.49□□□□□ -2.33
IGHV3-43A0A0B4J1X8 RNU6-1001P-201ENST00000411265 100 ntBASIC0.49□□□□□ -2.33
IGHV3-43A0A0B4J1X8 FABP5P4-201ENST00000437203 171 ntBASIC0.49□□□□□ -2.33
IGHV3-43A0A0B4J1X8 UQCRBP2-201ENST00000447827 297 ntBASIC0.49□□□□□ -2.33
IGHV3-43A0A0B4J1X8 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC0.49□□□□□ -2.33
IGHV3-43A0A0B4J1X8 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.49□□□□□ -2.33
IGHV3-43A0A0B4J1X8 MIR3684-201ENST00000579779 74 ntBASIC0.49□□□□□ -2.33
IGHV3-43A0A0B4J1X8 MIR4714-201ENST00000580728 77 ntBASIC0.49□□□□□ -2.33
IGHV3-43A0A0B4J1X8 AC104465.1-201ENST00000611365 139 ntBASIC0.49□□□□□ -2.33
IGHV3-43A0A0B4J1X8 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC0.49□□□□□ -2.33
IGHV3-43A0A0B4J1X8 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC0.49□□□□□ -2.33
IGHV3-43A0A0B4J1X8 AC023934.1-201ENST00000574529 2389 ntBASIC0.49□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 224.6 ms